GGRNA | Results

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Colletotrichum destructivum Putative PAZ domain, Piwi domain, ribonuclease H-like superfamily, argonaute, linker 1 (CDEST_15273), partial mRNA. (2346 bp)

LOCUS XM_062931429 2346 bp mRNA linear PLN 07-FEB-2024 DEFINITION Colletotrichum destructivum Putative PAZ domain, Piwi domain, ribonuclease H-like superfamily, argonaute, linker 1 (CDEST_15273), partial mRNA. ACCESSION XM_062931429 VERSION XM_062931429.1 DBLINK BioProject: PRJNA1073607 BioSample: SAMN37882108 KEYWORDS RefSeq. SOURCE Colletotrichum destructivum ORGANISM Colletotrichum destructivum Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Sordariomycetes; Hypocreomycetidae; Glomerellales; Glomerellaceae; Colletotrichum; Colletotrichum destructivum species complex. REFERENCE...

XM_062931429.1 - Colletotrichum destructivum - NCBI

Colletotrichum destructivum Putative PAZ domain, Piwi domain, ribonuclease H-like superfamily, argonaute, linker 1 (CDEST_03520), partial mRNA. (2979 bp)

LOCUS XM_062919679 2979 bp mRNA linear PLN 07-FEB-2024 DEFINITION Colletotrichum destructivum Putative PAZ domain, Piwi domain, ribonuclease H-like superfamily, argonaute, linker 1 (CDEST_03520), partial mRNA. ACCESSION XM_062919679 VERSION XM_062919679.1 DBLINK BioProject: PRJNA1073607 BioSample: SAMN37882108 KEYWORDS RefSeq. SOURCE Colletotrichum destructivum ORGANISM Colletotrichum destructivum Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Sordariomycetes; Hypocreomycetidae; Glomerellales; Glomerellaceae; Colletotrichum; Colletotrichum destructivum species complex. REFERENCE...

XM_062919679.1 - Colletotrichum destructivum - NCBI

Strongyloides ratti Argonaute/Dicer protein, PAZ domain-containing protein (SRAE_2000048500), partial mRNA. (288 bp)

LOCUS XM_024651321 288 bp mRNA linear INV 10-APR-2018 DEFINITION Strongyloides ratti Argonaute/Dicer protein, PAZ domain-containing protein (SRAE_2000048500), partial mRNA. ACCESSION XM_024651321 VERSION XM_024651321.1 DBLINK BioProject: PRJNA304930 BioSample: SAMEA1682816 KEYWORDS RefSeq. SOURCE Strongyloides ratti ORGANISM Strongyloides ratti Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Tylenchina; Panagrolaimomorpha; Strongyloidoidea; Strongyloididae; Strongyloides. REFERENCE COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. This...

XM_024651321.1 - Strongyloides ratti - NCBI

Caenorhabditis elegans PAZ domain-containing protein (wago-10), mRNA. (3217 bp)

misc_feature 1097..1375 /gene="wago-10" /locus_tag="CELE_T22H9.3" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and Zwille; Region: PAZ_argonaute_like; cd02846" /db_xref="CDD:239212" misc_feature order(1178..1180,1223..1225,1256..1258,1268..1270, 1322..1324,1343..1345,1349..1351) /gene="wago-10" /locus_tag="CELE_T22H9.3" /note="nucleic acid-binding interface [nucleotide binding]; other site" /...

NM_070776.5 - Caenorhabditis elegans - NCBI - UCSC - WormBase

Strongyloides ratti Argonaute/Dicer protein, PAZ domain and Stem cell self-renewal protein Piwi domain and Ribonuclease H-like domain-containing protein (SRAE_2000012500), partial mRNA. (903 bp)

LOCUS XM_024650915 903 bp mRNA linear INV 10-APR-2018 DEFINITION Strongyloides ratti Argonaute/Dicer protein, PAZ domain and Stem cell self-renewal protein Piwi domain and Ribonuclease H-like domain-containing protein (SRAE_2000012500), partial mRNA. ACCESSION XM_024650915 VERSION XM_024650915.1 DBLINK BioProject: PRJNA304930 BioSample: SAMEA1682816 KEYWORDS RefSeq. SOURCE Strongyloides ratti ORGANISM Strongyloides ratti Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Tylenchina; Panagrolaimomorpha; Strongyloidoidea; Strongyloididae; Strongyloides. REFERENCE COMMENT...

XM_024650915.1 - Strongyloides ratti - NCBI

Strongyloides ratti Argonaute/Dicer protein, PAZ domain and Stem cell self-renewal protein Piwi domain and Ribonuclease H-like domain and Protein of unknown function DUF2650 family-containing protein (SRAE_2000036100), partial mRNA. (3513 bp)

misc_feature 1342..1638 /locus_tag="SRAE_2000036100" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and Zwille; Region: PAZ_argonaute_like; cd02846" /db_xref="CDD:239212" misc_feature order(1450..1452,1492..1494,1531..1533,1543..1545, 1594..1596,1615..1617,1621..1623) /locus_tag="SRAE_2000036100" /note="nucleic acid-binding interface [nucleotide binding]; other site" /db_xref="CDD:239212" misc_...

XM_024651181.1 - Strongyloides ratti - NCBI

Penicillium chermesinum Qde2 (N7468_005915), partial mRNA. (3165 bp)

Penicillium chermesinum" /mol_type="mRNA" /strain="IBT 19713" /culture_collection="IBT:19713" /db_xref="taxon:63820" /chromosome="Unknown" gene 3165 /locus_tag="N7468_005915" /db_xref="GeneID:83202514" CDS 1..3165 /locus_tag="N7468_005915" /note="Argonaute linker 1 domain; Argonaute linker 2 domain; N-terminal domain of argonaute; PAZ domain; Piwi domain" /codon_start=1 /product="Qde2" /protein_id="XP_058330951.1" /db_xref="GeneID:83202514" /translation="...

XM_058475211.1 - Penicillium chermesinum - NCBI

Penicillium cinerascens uncharacterized protein (N7498_009454), partial mRNA. (2949 bp)

Penicillium cinerascens" /mol_type="mRNA" /strain="IBT 15544" /culture_collection="IBT:15544" /db_xref="taxon:70096" /chromosome="Unknown" gene 2949 /locus_tag="N7498_009454" /db_xref="GeneID:83183811" CDS 1..2949 /locus_tag="N7498_009454" /note="Argonaute linker 1 domain; Argonaute linker 2 domain; Mid domain of argonaute; PAZ domain; Piwi domain" /codon_start=1 /product="uncharacterized protein" /protein_id="XP_058303409.1" /db_xref="GeneID:83183811" /translation="...

XM_058456510.1 - Penicillium cinerascens - NCBI

Penicillium antarcticum uncharacterized protein (N7508_005815), partial mRNA. (3144 bp)

Penicillium antarcticum" /mol_type="mRNA" /strain="IBT 31339" /culture_collection="IBT:31339" /db_xref="taxon:416450" /chromosome="Unknown" gene 3144 /locus_tag="N7508_005815" /db_xref="GeneID:83191183" CDS 1..3144 /locus_tag="N7508_005815" /note="Argonaute linker 1 domain; Argonaute linker 2 domain; N-terminal domain of argonaute; PAZ domain; Piwi domain" /codon_start=1 /product="uncharacterized protein" /protein_id="XP_058320359.1" /db_xref="GeneID:83191183" /translation="...

XM_058463881.1 - Penicillium antarcticum - NCBI

PREDICTED: Sorex fumeus argonaute RISC catalytic component 3 (AGO3), transcript variant X4, mRNA. (4538 bp)

misc_feature 140..481 /gene="AGO3" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and Zwille; Region: PAZ_argonaute_like; cd02846" /db_xref="CDD:239212" misc_feature order(275..277,320..322,362..364,374..376,428..430, 449..451,455..457) /gene="AGO3" /note="nucleic acid-binding interface [nucleotide binding]; other site" /db_xref="CDD:239212" misc_feature 614..1891 /gene="AGO3" /note="PIWI...

XM_056122749.1 - Sorex fumeus (smoky shrew) - NCBI

PREDICTED: Sorex fumeus argonaute RISC catalytic component 3 (AGO3), transcript variant X3, mRNA. (4564 bp)

misc_feature 166..507 /gene="AGO3" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and Zwille; Region: PAZ_argonaute_like; cd02846" /db_xref="CDD:239212" misc_feature order(301..303,346..348,388..390,400..402,454..456, 475..477,481..483) /gene="AGO3" /note="nucleic acid-binding interface [nucleotide binding]; other site" /db_xref="CDD:239212" misc_feature 640..1917 /gene="AGO3" /note="PIWI...

XM_056122748.1 - Sorex fumeus (smoky shrew) - NCBI

PREDICTED: Sorex fumeus argonaute RISC catalytic component 3 (AGO3), transcript variant X2, mRNA. (4690 bp)

misc_feature 292..633 /gene="AGO3" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and Zwille; Region: PAZ_argonaute_like; cd02846" /db_xref="CDD:239212" misc_feature order(427..429,472..474,514..516,526..528,580..582, 601..603,607..609) /gene="AGO3" /note="nucleic acid-binding interface [nucleotide binding]; other site" /db_xref="CDD:239212" misc_feature 766..2043 /gene="AGO3" /note="PIWI...

XM_056122747.1 - Sorex fumeus (smoky shrew) - NCBI

Laccaria bicolor S238N-H82 argonaute-like protein (AGO16204), partial mRNA. (2352 bp)

S238N-H82" /mol_type="mRNA" /strain="S238N-H82" /db_xref="taxon:486041" /chromosome="Unknown" gene 2352 /gene="AGO16204" /locus_tag="LACBIDRAFT_315429" /db_xref="GeneID:6074035" CDS 1..2352 /gene="AGO16204" /locus_tag="LACBIDRAFT_315429" /note="A PIWI/PAZ domain containing member of the Argonaute gene family" /codon_start=1 /product="argonaute-like protein" /protein_id="XP_001878380.1" /db_xref="GeneID:6074035" /db_xref="InterPro:IPR003100" /db_xref="InterPro:IPR003165" /translation="...

XM_001878345.1 - Laccaria bicolor S238N-H82 - NCBI

PREDICTED: Sorex fumeus argonaute RISC component 1 (AGO1), transcript variant X2, mRNA. (6624 bp)

misc_feature 183..524 /gene="AGO1" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and Zwille; Region: PAZ_argonaute_like; cd02846" /db_xref="CDD:239212" misc_feature order(318..320,363..365,405..407,417..419,471..473, 492..494,498..500) /gene="AGO1" /note="nucleic acid-binding interface [nucleotide binding]; other site" /db_xref="CDD:239212" misc_feature 657..1934 /gene="AGO1" /note="PIWI...

XM_056122751.1 - Sorex fumeus (smoky shrew) - NCBI

Laccaria bicolor S238N-H82 argonaute-like protein (LACBIDRAFT_295925), partial mRNA. (2898 bp)

organism="Laccaria bicolor S238N-H82" /mol_type="mRNA" /strain="S238N-H82" /db_xref="taxon:486041" /chromosome="Unknown" gene 2898 /locus_tag="LACBIDRAFT_295925" /db_xref="GeneID:6085310" CDS 1..2898 /locus_tag="LACBIDRAFT_295925" /note="A PIWI/PAZ domain containing member of the Argonaute gene family" /codon_start=1 /product="argonaute-like protein" /protein_id="XP_001889672.1" /db_xref="GeneID:6085310" /db_xref="InterPro:IPR003100" /db_xref="InterPro:IPR003165" /translation="...

XM_001889637.1 - Laccaria bicolor S238N-H82 - NCBI

Laccaria bicolor S238N-H82 argonaute-like protein (AGO16202), partial mRNA. (2715 bp)

S238N-H82" /mol_type="mRNA" /strain="S238N-H82" /db_xref="taxon:486041" /chromosome="Unknown" gene 2715 /gene="AGO16202" /locus_tag="LACBIDRAFT_311854" /db_xref="GeneID:6072122" CDS 1..2715 /gene="AGO16202" /locus_tag="LACBIDRAFT_311854" /note="A PIWI/PAZ domain containing member of the Argonaute gene family" /codon_start=1 /product="argonaute-like protein" /protein_id="XP_001876710.1" /db_xref="GeneID:6072122" /db_xref="InterPro:IPR003100" /db_xref="InterPro:IPR003165" /translation="...

XM_001876675.1 - Laccaria bicolor S238N-H82 - NCBI

Laccaria bicolor S238N-H82 argonaute-like protein (AGO16205), partial mRNA. (2766 bp)

S238N-H82" /mol_type="mRNA" /strain="S238N-H82" /db_xref="taxon:486041" /chromosome="Unknown" gene 2766 /gene="AGO16205" /locus_tag="LACBIDRAFT_311445" /db_xref="GeneID:6072513" CDS 1..2766 /gene="AGO16205" /locus_tag="LACBIDRAFT_311445" /note="A PIWI/PAZ domain containing member of the Argonaute gene family" /codon_start=1 /product="argonaute-like protein" /protein_id="XP_001876972.1" /db_xref="GeneID:6072513" /db_xref="InterPro:IPR003100" /db_xref="InterPro:IPR003165" /translation="...

XM_001876937.1 - Laccaria bicolor S238N-H82 - NCBI

Laccaria bicolor S238N-H82 argonaute-like protein (AGO16201), partial mRNA. (2886 bp)

S238N-H82" /mol_type="mRNA" /strain="S238N-H82" /db_xref="taxon:486041" /chromosome="Unknown" gene 2886 /gene="AGO16201" /locus_tag="LACBIDRAFT_317035" /db_xref="GeneID:6074423" CDS 1..2886 /gene="AGO16201" /locus_tag="LACBIDRAFT_317035" /note="A PIWI/PAZ domain containing member of the Argonaute gene family" /codon_start=1 /product="argonaute-like protein" /protein_id="XP_001878739.1" /db_xref="GeneID:6074423" /db_xref="InterPro:IPR003100" /db_xref="InterPro:IPR003165" /translation="...

XM_001878704.1 - Laccaria bicolor S238N-H82 - NCBI

PREDICTED: Acipenser ruthenus protein argonaute-1 (LOC117413876), transcript variant X2, mRNA. (3201 bp)

misc_feature 474..866 /gene="LOC117413876" /note="N-terminal domain of argonaute; Region: ArgoN; pfam16486" /db_xref="CDD:465134" misc_feature 894..1046 /gene="LOC117413876" /note="Argonaute linker 1 domain; Region: ArgoL1; pfam08699" /db_xref="CDD:462567" misc_feature 1047..1409 /gene="LOC117413876" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and Zwille; Region: PAZ_argonaute_like;...

XM_058999547.1 - Acipenser ruthenus (sterlet) - NCBI

PREDICTED: Pocillopora verrucosa protein argonaute-2-like (LOC131787532), partial mRNA. (2259 bp)

misc_feature <1..251 /gene="LOC131787532" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and Zwille; Region: PAZ_argonaute_like; cd02846" /db_xref="CDD:239212" misc_feature order(45..47,90..92,135..137,147..149,201..203,219..221, 225..227) /gene="LOC131787532" /note="nucleic acid-binding interface [nucleotide binding]; other site" /db_xref="CDD:239212" misc_feature 390..1667 /gene="...

XM_059104628.1 - Pocillopora verrucosa - NCBI

PREDICTED: Sorex fumeus argonaute RISC component 4 (AGO4), transcript variant X3, mRNA. (6235 bp)

misc_feature 45..299 /gene="AGO4" /note="N-terminal domain of argonaute; Region: ArgoN; pfam16486" /db_xref="CDD:465134" misc_feature 330..482 /gene="AGO4" /note="Argonaute linker 1 domain; Region: ArgoL1; pfam08699" /db_xref="CDD:462567" misc_feature 483..845 /gene="AGO4" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and Zwille; Region: PAZ_argonaute_like; cd02846" /db_xref="CDD:239212" misc_...

XM_056122744.1 - Sorex fumeus (smoky shrew) - NCBI

PREDICTED: Acipenser ruthenus protein argonaute-1 (LOC117968115), transcript variant X3, mRNA. (3334 bp)

misc_feature 748..972 /gene="LOC117968115" /note="N-terminal domain of argonaute; Region: ArgoN; pfam16486" /db_xref="CDD:465134" misc_feature 1000..1152 /gene="LOC117968115" /note="Argonaute linker 1 domain; Region: ArgoL1; pfam08699" /db_xref="CDD:462567" misc_feature 1153..1515 /gene="LOC117968115" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and Zwille; Region: PAZ_argonaute_like;...

XM_059020041.1 - Acipenser ruthenus (sterlet) - NCBI

PREDICTED: Sorex fumeus argonaute RISC component 4 (AGO4), transcript variant X4, mRNA. (6518 bp)

misc_feature 328..582 /gene="AGO4" /note="N-terminal domain of argonaute; Region: ArgoN; pfam16486" /db_xref="CDD:465134" misc_feature 613..765 /gene="AGO4" /note="Argonaute linker 1 domain; Region: ArgoL1; pfam08699" /db_xref="CDD:462567" misc_feature 766..1128 /gene="AGO4" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and Zwille; Region: PAZ_argonaute_like; cd02846" /db_xref="CDD:239212"...

XM_056122745.1 - Sorex fumeus (smoky shrew) - NCBI

PREDICTED: Sorex fumeus argonaute RISC component 4 (AGO4), transcript variant X2, mRNA. (6788 bp)

misc_feature 598..852 /gene="AGO4" /note="N-terminal domain of argonaute; Region: ArgoN; pfam16486" /db_xref="CDD:465134" misc_feature 883..1035 /gene="AGO4" /note="Argonaute linker 1 domain; Region: ArgoL1; pfam08699" /db_xref="CDD:462567" misc_feature 1036..1398 /gene="AGO4" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and Zwille; Region: PAZ_argonaute_like; cd02846" /db_xref="CDD:239212"...

XM_056122743.1 - Sorex fumeus (smoky shrew) - NCBI

PREDICTED: Sorex fumeus argonaute RISC catalytic component 2 (AGO2), mRNA. (3877 bp)

misc_feature 423..647 /gene="AGO2" /note="N-terminal domain of argonaute; Region: ArgoN; pfam16486" /db_xref="CDD:465134" misc_feature 675..827 /gene="AGO2" /note="Argonaute linker 1 domain; Region: ArgoL1; pfam08699" /db_xref="CDD:462567" misc_feature 828..1190 /gene="AGO2" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and Zwille; Region: PAZ_argonaute_like; cd02846" /db_xref="CDD:239212"...

XM_056110923.1 - Sorex fumeus (smoky shrew) - NCBI

PREDICTED: Kogia breviceps protein argonaute-3 (LOC131746051), transcript variant X3, mRNA. (2813 bp)

misc_feature 120..461 /gene="LOC131746051" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and Zwille; Region: PAZ_argonaute_like; cd02846" /db_xref="CDD:239212" misc_feature order(255..257,300..302,342..344,354..356,408..410, 429..431,435..437) /gene="LOC131746051" /note="nucleic acid-binding interface [nucleotide binding]; other site" /db_xref="CDD:239212" misc_feature 594..1871 /gene="...

XM_059047015.1 - Kogia breviceps (pygmy sperm whale) - NCBI

PREDICTED: Diceros bicornis minor argonaute RISC catalytic component 3 (AGO3), transcript variant X6, mRNA. (6000 bp)

misc_feature 91..432 /gene="AGO3" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and Zwille; Region: PAZ_argonaute_like; cd02846" /db_xref="CDD:239212" misc_feature order(226..228,271..273,313..315,325..327,379..381, 400..402,406..408) /gene="AGO3" /note="nucleic acid-binding interface [nucleotide binding]; other site" /db_xref="CDD:239212" misc_feature 565..1842 /gene="AGO3" /note="PIWI domain...

XM_058553673.1 - Diceros bicornis minor - NCBI

PREDICTED: Diceros bicornis minor argonaute RISC catalytic component 3 (AGO3), transcript variant X5, mRNA. (6006 bp)

misc_feature 97..438 /gene="AGO3" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and Zwille; Region: PAZ_argonaute_like; cd02846" /db_xref="CDD:239212" misc_feature order(232..234,277..279,319..321,331..333,385..387, 406..408,412..414) /gene="AGO3" /note="nucleic acid-binding interface [nucleotide binding]; other site" /db_xref="CDD:239212" misc_feature 571..1848 /gene="AGO3" /note="PIWI domain...

XM_058553672.1 - Diceros bicornis minor - NCBI

PREDICTED: Hylobates moloch argonaute RISC catalytic component 3 (AGO3), transcript variant X1, mRNA. (9163 bp)

misc_feature 85..426 /gene="AGO3" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and Zwille; Region: PAZ_argonaute_like; cd02846" /db_xref="CDD:239212" misc_feature order(220..222,265..267,307..309,319..321,373..375, 394..396,400..402) /gene="AGO3" /note="nucleic acid-binding interface [nucleotide binding]; other site" /db_xref="CDD:239212" misc_feature 559..1836 /gene="AGO3" /note="PIWI domain...

XM_032160239.2 - Hylobates moloch (silvery gibbon) - NCBI

PREDICTED: Sorex fumeus argonaute RISC component 4 (AGO4), transcript variant X1, mRNA. (6685 bp)

misc_feature 360..749 /gene="AGO4" /note="N-terminal domain of argonaute; Region: ArgoN; pfam16486" /db_xref="CDD:465134" misc_feature 780..932 /gene="AGO4" /note="Argonaute linker 1 domain; Region: ArgoL1; pfam08699" /db_xref="CDD:462567" misc_feature 933..1295 /gene="AGO4" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and Zwille; Region: PAZ_argonaute_like; cd02846" /db_xref="CDD:239212"...

XM_056122742.1 - Sorex fumeus (smoky shrew) - NCBI

PREDICTED: Eurytemora carolleeae protein argonaute-2 (LOC111704341), mRNA. (2876 bp)

misc_feature 568..957 /gene="LOC111704341" /note="N-terminal domain of argonaute; Region: ArgoN; pfam16486" /db_xref="CDD:465134" misc_feature 985..1137 /gene="LOC111704341" /note="Argonaute linker 1 domain; Region: ArgoL1; pfam08699" /db_xref="CDD:462567" misc_feature 1138..1446 /gene="LOC111704341" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and Zwille; Region: PAZ_argonaute_like;...

XM_023476568.1 - Eurytemora carolleeae - NCBI

PREDICTED: Sorex fumeus argonaute RISC catalytic component 3 (AGO3), transcript variant X1, mRNA. (5217 bp)

misc_feature 333..617 /gene="AGO3" /note="N-terminal domain of argonaute; Region: ArgoN; pfam16486" /db_xref="CDD:465134" misc_feature 645..797 /gene="AGO3" /note="Argonaute linker 1 domain; Region: ArgoL1; pfam08699" /db_xref="CDD:462567" misc_feature 798..1160 /gene="AGO3" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and Zwille; Region: PAZ_argonaute_like; cd02846" /db_xref="CDD:239212"...

XM_056122746.1 - Sorex fumeus (smoky shrew) - NCBI

PREDICTED: Diceros bicornis minor argonaute RISC catalytic component 3 (AGO3), transcript variant X4, mRNA. (6184 bp)

misc_feature 254..616 /gene="AGO3" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and Zwille; Region: PAZ_argonaute_like; cd02846" /db_xref="CDD:239212" misc_feature order(410..412,455..457,497..499,509..511,563..565, 584..586,590..592) /gene="AGO3" /note="nucleic acid-binding interface [nucleotide binding]; other site" /db_xref="CDD:239212" misc_feature 749..2026 /gene="AGO3" /note="PIWI...

XM_058553671.1 - Diceros bicornis minor - NCBI

PREDICTED: Hylobates moloch argonaute RISC component 1 (AGO1), transcript variant X5, mRNA. (7057 bp)

misc_feature 273..425 /gene="AGO1" /note="Argonaute linker 1 domain; Region: ArgoL1; pfam08699" /db_xref="CDD:462567" misc_feature 426..788 /gene="AGO1" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and Zwille; Region: PAZ_argonaute_like; cd02846" /db_xref="CDD:239212" misc_feature order(582..584,627..629,669..671,681..683,735..737, 756..758,762..764) /gene="AGO1" /note="nucleic acid-binding...

XM_058442205.1 - Hylobates moloch (silvery gibbon) - NCBI

PREDICTED: Diceros bicornis minor argonaute RISC component 4 (AGO4), transcript variant X2, mRNA. (6369 bp)

misc_feature 345..734 /gene="AGO4" /note="N-terminal domain of argonaute; Region: ArgoN; pfam16486" /db_xref="CDD:465134" misc_feature 765..917 /gene="AGO4" /note="Argonaute linker 1 domain; Region: ArgoL1; pfam08699" /db_xref="CDD:462567" misc_feature 918..1280 /gene="AGO4" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and Zwille; Region: PAZ_argonaute_like; cd02846" /db_xref="CDD:239212"...

XM_058553661.1 - Diceros bicornis minor - NCBI

PREDICTED: Hemibagrus wyckioides argonaute RISC component 1 (ago1), mRNA. (5748 bp)

misc_feature 537..929 /gene="ago1" /note="N-terminal domain of argonaute; Region: ArgoN; pfam16486" /db_xref="CDD:465134" misc_feature 957..1109 /gene="ago1" /note="Argonaute linker 1 domain; Region: ArgoL1; pfam08699" /db_xref="CDD:462567" misc_feature 1110..1472 /gene="ago1" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and Zwille; Region: PAZ_argonaute_like; cd02846" /db_xref="CDD:239212"...

XM_058377107.1 - Hemibagrus wyckioides - NCBI

PREDICTED: Musca domestica protein argonaute-2-like (LOC131805362), mRNA. (2577 bp)

misc_feature 439..654 /gene="LOC131805362" /note="N-terminal domain of argonaute; Region: ArgoN; pfam16486" /db_xref="CDD:465134" misc_feature 835..1161 /gene="LOC131805362" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and Zwille; Region: PAZ_argonaute_like; cd02846" /db_xref="CDD:239212" misc_feature order(973..975,1015..1017,1045..1047,1057..1059, 1108..1110,1129..1131,1135..1137) /gene="...

XM_059128476.1 - Musca domestica (house fly) - NCBI

PREDICTED: Sorex fumeus argonaute RISC component 1 (AGO1), transcript variant X1, mRNA. (7350 bp)

misc_feature 315..707 /gene="AGO1" /note="N-terminal domain of argonaute; Region: ArgoN; pfam16486" /db_xref="CDD:465134" misc_feature 735..887 /gene="AGO1" /note="Argonaute linker 1 domain; Region: ArgoL1; pfam08699" /db_xref="CDD:462567" misc_feature 888..1250 /gene="AGO1" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and Zwille; Region: PAZ_argonaute_like; cd02846" /db_xref="CDD:239212"...

XM_056122750.1 - Sorex fumeus (smoky shrew) - NCBI

PREDICTED: Solea solea argonaute RISC catalytic component 3a (ago3a), transcript variant X2, mRNA. (5771 bp)

misc_feature 993..1277 /gene="ago3a" /note="N-terminal domain of argonaute; Region: ArgoN; pfam16486" /db_xref="CDD:465134" misc_feature 1305..1457 /gene="ago3a" /note="Argonaute linker 1 domain; Region: ArgoL1; pfam08699" /db_xref="CDD:462567" misc_feature 1458..1820 /gene="ago3a" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and Zwille; Region: PAZ_argonaute_like; cd02846" /db_xref="CDD...

XM_058647118.1 - Solea solea (common sole) - NCBI

PREDICTED: Solea solea argonaute RISC catalytic component 3b (ago3b), transcript variant X4, mRNA. (7974 bp)

misc_feature 366..650 /gene="ago3b" /note="N-terminal domain of argonaute; Region: ArgoN; pfam16486" /db_xref="CDD:465134" misc_feature 678..830 /gene="ago3b" /note="Argonaute linker 1 domain; Region: ArgoL1; pfam08699" /db_xref="CDD:462567" misc_feature 831..1193 /gene="ago3b" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and Zwille; Region: PAZ_argonaute_like; cd02846" /db_xref="CDD:239212"...

XM_058618366.1 - Solea solea (common sole) - NCBI

PREDICTED: Marmota monax argonaute RISC catalytic component 3 (Ago3), transcript variant X4, mRNA. (19334 bp)

misc_feature 2633..2974 /gene="Ago3" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and Zwille; Region: PAZ_argonaute_like; cd02846" /db_xref="CDD:239212" misc_feature order(2768..2770,2813..2815,2855..2857,2867..2869, 2921..2923,2942..2944,2948..2950) /gene="Ago3" /note="nucleic acid-binding interface [nucleotide binding]; other site" /db_xref="CDD:239212" misc_feature 3107..4384 /gene="...

XM_046468757.2 - Marmota monax (woodchuck) - NCBI

PREDICTED: Marmota monax argonaute RISC catalytic component 3 (Ago3), transcript variant X3, mRNA. (19328 bp)

misc_feature 2627..2968 /gene="Ago3" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and Zwille; Region: PAZ_argonaute_like; cd02846" /db_xref="CDD:239212" misc_feature order(2762..2764,2807..2809,2849..2851,2861..2863, 2915..2917,2936..2938,2942..2944) /gene="Ago3" /note="nucleic acid-binding interface [nucleotide binding]; other site" /db_xref="CDD:239212" misc_feature 3101..4378 /gene="...

XM_046468758.2 - Marmota monax (woodchuck) - NCBI

PREDICTED: Ochotona princeps argonaute RISC catalytic component 3 (AGO3), transcript variant X3, mRNA. (5322 bp)

misc_feature 74..415 /gene="AGO3" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and Zwille; Region: PAZ_argonaute_like; cd02846" /db_xref="CDD:239212" misc_feature order(209..211,254..256,296..298,308..310,362..364, 383..385,389..391) /gene="AGO3" /note="nucleic acid-binding interface [nucleotide binding]; other site" /db_xref="CDD:239212" misc_feature 548..1825 /gene="AGO3" /note="PIWI domain...

XM_058678838.1 - Ochotona princeps (American pika) - NCBI

PREDICTED: Solea solea argonaute RISC catalytic component 3a (ago3a), transcript variant X1, mRNA. (5792 bp)

XM_058647117.1 - Solea solea (common sole) - NCBI

PREDICTED: Solea solea argonaute RISC catalytic component 3b (ago3b), transcript variant X3, mRNA. (7995 bp)

XM_058618365.1 - Solea solea (common sole) - NCBI

PREDICTED: Globicephala melas protein argonaute-1 (LOC115860028), transcript variant X4, mRNA. (3533 bp)

misc_feature 193..345 /gene="LOC115860028" /note="Argonaute linker 1 domain; Region: ArgoL1; pfam08699" /db_xref="CDD:462567" misc_feature 346..708 /gene="LOC115860028" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and Zwille; Region: PAZ_argonaute_like; cd02846" /db_xref="CDD:239212" misc_feature order(502..504,547..549,589..591,601..603,655..657, 676..678,682..684) /gene="LOC115860028" /note...

XM_030869425.2 - Globicephala melas (long-finned pilot whale) - NCBI

PREDICTED: Acipenser ruthenus protein argonaute-1 (LOC117413876), transcript variant X1, mRNA. (3401 bp)

XM_058999546.1 - Acipenser ruthenus (sterlet) - NCBI

PREDICTED: Magnolia sinica protein argonaute PNH1-like (LOC131223284), transcript variant X2, mRNA. (3411 bp)

misc_feature 1068..1295 /gene="LOC131223284" /note="N-terminal domain of argonaute; Region: ArgoN; pfam16486" /db_xref="CDD:465134" misc_feature 1323..1475 /gene="LOC131223284" /note="Argonaute linker 1 domain; Region: ArgoL1; pfam08699" /db_xref="CDD:462567" misc_feature 1476..>1667 /gene="LOC131223284" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and Zwille; Region: PAZ_argonaute_like;...

XM_058218632.1 - Magnolia sinica - NCBI

PREDICTED: Solea solea argonaute RISC catalytic component 3b (ago3b), transcript variant X2, mRNA. (8007 bp)

XM_058618363.1 - Solea solea (common sole) - NCBI

PREDICTED: Ahaetulla prasina protein argonaute-3 (LOC131204239), transcript variant X4, mRNA. (3793 bp)

misc_feature 500..652 /gene="LOC131204239" /note="Argonaute linker 1 domain; Region: ArgoL1; pfam08699" /db_xref="CDD:462567" misc_feature 653..1015 /gene="LOC131204239" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and Zwille; Region: PAZ_argonaute_like; cd02846" /db_xref="CDD:239212" misc_feature order(809..811,854..856,896..898,908..910,962..964, 983..985,989..991) /gene="LOC131204239" /...

XM_058195252.1 - Ahaetulla prasina - NCBI

Data Export:

Debug Info:

0.000 | 0.000 | search_start;
0.090 | 0.090 | count_done; http://172.18.8.71:7700/v1/refsub/query?q=((full_search:*:Argonaute)%7C(nt:Argonaute)%7C(aa:Argonaute))?to=0&format=json
0.109 | 0.019 | count_done; http://172.18.8.71:7700/v1/refsub/query?q=((full_search:*:PAZ+domain)%7C(nt:PAZ+domain)%7C(aa:PAZ+domain))?to=0&format=json
0.276 | 0.168 | search_done; http://172.18.8.71:7700/v1/refsub/query?q=((full_search:*:Argonaute)%7C(nt:Argonaute)%7C(aa:Argonaute))%26((full_search:*:PAZ+domain)%7C(nt:PAZ+domain)%7C(aa:PAZ+domain))?to=49?from=0?snippet=full_search?drilldown=source?get=accession,version,gi,length,symbol,synonym,geneid,division,source,definition&format=json
0.285 | 0.009 | cgi_end;

If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596. [Full Text]

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Data Export:

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