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2021-01-20 20:13:57, GGRNA : RefSeq release 203 (Nov, 2020)

Summary:

Results:

Matches are highlighted with green background. Overlapping matches are dark colored.

Aspergillus fischeri NRRL 181 PAZ domain protein (NFIA_024180), partial mRNA. (1410 bp)
misc_feature 109..525 /locus_tag="NFIA_024180" /note="N-terminal domain of argonaute; Region: ArgoN; pfam16486" /db_xref="CDD:293095" misc_feature 559..702 /locus_tag="NFIA_024180" /note="Argonaute linker 1 domain; Region: ArgoL1; pfam08699" /db_xref="CDD:285861" misc_feature 754..1104 /locus_tag="NFIA_024180" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and Zwille; Region: PAZ_argonaute_like...
XM_001263935.1 - Aspergillus fischeri NRRL 181 (Neosartorya fischeri NRRL 181) - NCBI
Strongyloides ratti Argonaute/Dicer protein, PAZ domain-containing protein (SRAE_2000048500), partial mRNA. (288 bp)
LOCUS XM_024651321 288 bp mRNA linear INV 10-APR-2018 DEFINITION Strongyloides ratti Argonaute/Dicer protein, PAZ domain-containing protein (SRAE_2000048500), partial mRNA. ACCESSION XM_024651321 VERSION XM_024651321.1 DBLINK BioProject: PRJNA304930 BioSample: SAMEA1682816 KEYWORDS RefSeq. SOURCE Strongyloides ratti ORGANISM Strongyloides ratti Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Tylenchina; Panagrolaimomorpha; Strongyloidoidea; Strongyloididae; Strongyloides. REFERENCE COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. This...
XM_024651321.1 - Strongyloides ratti - NCBI
PREDICTED: Zea mays protein argonaute 1B (LOC103630173), mRNA. (1033 bp)
introns" /db_xref="GeneID:103630173" CDS 254..850 /gene="LOC103630173" /codon_start=1 /product="protein argonaute 1B" /protein_id="XP_020395108.1" /db_xref="GeneID:103630173" /translation="MGLSLNIDMSSTAFIEPLPMIDFVAQLLNRDILVRPLSDSDRVKIKKTLRGVKVEVTHRGNMRRKYRISGLTSQATRELSFPVDDRGTVKTVVQYFMETYGFSIQHTTLPCLQVGNQQRPNYLPMEVCKIVEGQRYSKRLNEKQITSLLKVTCQRPQERELDILQDSGSHQVTPPHHDDFADKCLNSSGGATNNNLMS" misc_feature 302..646 /gene="LOC103630173" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA...
XM_020539519.2 - Zea mays - NCBI
PREDICTED: Zea mays protein argonaute 1B (LOC103651475), transcript variant X1, mRNA. (1573 bp)
product="protein argonaute 1B isoform X1" /protein_id="XP_008675332.1" /db_xref="GeneID:103651475" /translation="MCREHKKTDVQSILVTADILAGRQADAPQEALQVLDIVLRELPTARYSPVGRSFYSPNLGRRQKLGEGLESWRGFYQSIRPTQMGLSLNIDMSSTAFIEPLPVIDFVAQLLNRDISVRPLSDSDRVKIKKALRGVKVEVTGNMRRKYHISGLTSQATRELSFPVDDRGTVKTVVQYFMETYGFSIQHTTLPCLQVGNQQRPNYLPMEVCKIVEGQHYSKRLNEKQITALLKVTCQRPQERELDILQDSGSHQVTPPPHDDFADKCLHSSGGAMNNNPMS" misc_feature 677..826 /gene="LOC103651475" /note="Argonaute linker 1 domain; Region: ArgoL1; pfam08699" /db_xref="CDD:285861" misc_feature 827..1165 /gene="LOC103651475" /note="PAZ domain, argonaute_like...
XM_008677110.4 - Zea mays - NCBI
Caenorhabditis remanei hypothetical protein (CRE_14480) mRNA, complete cds. (2583 bp)
misc_feature 16..2415 /locus_tag="CRE_14480" /note="protein argonaute; Provisional; Region: PLN03202" /db_xref="CDD:215631" misc_feature 73..468 /locus_tag="CRE_14480" /note="N-terminal domain of argonaute; Region: ArgoN; pfam16486" /db_xref="CDD:293095" misc_feature 499..651 /locus_tag="CRE_14480" /note="Argonaute linker 1 domain; Region: ArgoL1; pfam08699" /db_xref="CDD:285861" misc_feature 652..1014 /locus_tag="CRE_14480" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA...
XM_003107282.1 - Caenorhabditis remanei - NCBI
Caenorhabditis remanei hypothetical protein (CRE_08398) mRNA, complete cds. (2571 bp)
misc_feature 79..2424 /locus_tag="CRE_08398" /note="protein argonaute; Provisional; Region: PLN03202" /db_xref="CDD:215631" misc_feature 79..477 /locus_tag="CRE_08398" /note="N-terminal domain of argonaute; Region: ArgoN; pfam16486" /db_xref="CDD:293095" misc_feature 508..672 /locus_tag="CRE_08398" /note="Argonaute linker 1 domain; Region: ArgoL1; pfam08699" /db_xref="CDD:285861" misc_feature 676..1041 /locus_tag="CRE_08398" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA...
XM_003101857.1 - Caenorhabditis remanei - NCBI
Caenorhabditis remanei hypothetical protein (CRE_09584) mRNA, complete cds. (2709 bp)
misc_feature 73..2559 /locus_tag="CRE_09584" /note="protein argonaute; Provisional; Region: PLN03202" /db_xref="CDD:215631" misc_feature 157..573 /locus_tag="CRE_09584" /note="N-terminal domain of argonaute; Region: ArgoN; pfam16486" /db_xref="CDD:293095" misc_feature 604..774 /locus_tag="CRE_09584" /note="Argonaute linker 1 domain; Region: ArgoL1; pfam08699" /db_xref="CDD:285861" misc_feature 775..1140 /locus_tag="CRE_09584" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA...
XM_003103769.1 - Caenorhabditis remanei - NCBI
Xenopus laevis argonaute 4, RISC catalytic component L homeolog (ago4.L), mRNA. (4129 bp)
ago4; argonaute-4; Argonaute4; eif2c4" /note="protein argonaute; Provisional; Region: PLN03202" /db_xref="CDD:215631" misc_feature 141..554 /gene="ago4.L" /gene_synonym="ago4; argonaute-4; Argonaute4; eif2c4" /note="N-terminal domain of argonaute; Region: ArgoN; pfam16486" /db_xref="CDD:293095" misc_feature 588..737 /gene="ago4.L" /gene_synonym="ago4; argonaute-4; Argonaute4; eif2c4" /note="Argonaute linker 1 domain; Region: ArgoL1; pfam08699" /db_xref="CDD:285861" misc_feature 738..1100 /gene="ago4.L" /gene_synonym="ago4; argonaute-4; Argonaute4; eif2c4" /note="PAZ domain, argonaute_like...
Synonym: ago4; argonaute-4; Argonaute4; eif2c4
NM_001096105.1 - Xenopus laevis (African clawed frog) - NCBI
Caenorhabditis remanei hypothetical protein (CRE_25241) mRNA, complete cds. (3177 bp)
misc_feature 250..2931 /locus_tag="CRE_25241" /note="protein argonaute; Provisional; Region: PLN03202" /db_xref="CDD:215631" misc_feature 316..750 /locus_tag="CRE_25241" /note="N-terminal domain of argonaute; Region: ArgoN; pfam16486" /db_xref="CDD:293095" misc_feature 841..963 /locus_tag="CRE_25241" /note="Argonaute linker 1 domain; Region: ArgoL1; pfam08699" /db_xref="CDD:285861" misc_feature 1174..1506 /locus_tag="CRE_25241" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA...
XM_003113068.1 - Caenorhabditis remanei - NCBI
Caenorhabditis remanei CRE-ALG-1 protein (Cre-alg-1) mRNA, complete cds. (3069 bp)
feature 424..2865 /gene="Cre-alg-1" /locus_tag="CRE_22331" /note="protein argonaute; Provisional; Region: PLN03202" /db_xref="CDD:215631" misc_feature 424..840 /gene="Cre-alg-1" /locus_tag="CRE_22331" /note="N-terminal domain of argonaute; Region: ArgoN; pfam16486" /db_xref="CDD:293095" misc_feature <1009..1110 /gene="Cre-alg-1" /locus_tag="CRE_22331" /note="Argonaute linker 1 domain; Region: ArgoL1; pfam08699" /db_xref="CDD:285861" misc_feature 1111..1476 /gene="Cre-alg-1" /locus_tag="CRE_22331" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing...
XM_003105478.1 - Caenorhabditis remanei - NCBI
PREDICTED: Egretta garzetta argonaute RISC component 1 (AGO1), mRNA. (2913 bp)
misc_feature 241..465 /gene="AGO1" /note="N-terminal domain of argonaute; Region: ArgoN; pfam16486" /db_xref="CDD:374571" misc_feature 493..645 /gene="AGO1" /note="Argonaute linker 1 domain; Region: ArgoL1; pfam08699" /db_xref="CDD:370073" misc_feature 646..1008 /gene="AGO1" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and Zwille; Region: PAZ_argonaute_like; cd02846" /db_xref="CDD:239212"...
XM_035890918.1 - Egretta garzetta (little egret) - NCBI
PREDICTED: Aplysia californica protein argonaute-1 (LOC101846762), mRNA. (4660 bp)
misc_feature 248..2356 /gene="LOC101846762" /note="protein argonaute; Provisional; Region: PLN03202" /db_xref="CDD:215631" misc_feature 353..769 /gene="LOC101846762" /note="N-terminal domain of argonaute; Region: ArgoN; pfam16486" /db_xref="CDD:293095" misc_feature 800..949 /gene="LOC101846762" /note="Argonaute linker 1 domain; Region: ArgoL1; pfam08699" /db_xref="CDD:285861" misc_feature 950..1312 /gene="LOC101846762" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference...
XM_013087288.2 - Aplysia californica (California sea hare) - NCBI
PREDICTED: Cricetulus griseus protein argonaute-1 (LOC100768807), transcript variant X4, mRNA. (2409 bp)
misc_feature 205..429 /gene="LOC100768807" /note="N-terminal domain of argonaute; Region: ArgoN; pfam16486" /db_xref="CDD:374571" misc_feature 457..609 /gene="LOC100768807" /note="Argonaute linker 1 domain; Region: ArgoL1; pfam08699" /db_xref="CDD:370073" misc_feature 610..972 /gene="LOC100768807" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and Zwille; Region: PAZ_argonaute_like; cd02846" /...
XM_035454862.1 - Cricetulus griseus (Chinese hamster) - NCBI
PREDICTED: Lynx canadensis argonaute RISC catalytic component 3 (AGO3), transcript variant X2, mRNA. (3934 bp)
misc_feature 742..1083 /gene="AGO3" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and Zwille; Region: PAZ_argonaute_like; cd02846" /db_xref="CDD:239212" misc_feature order(877..879,922..924,964..966,976..978,1030..1032, 1051..1053,1057..1059) /gene="AGO3" /note="nucleic acid-binding interface [nucleotide binding]; other site" /db_xref="CDD:239212" misc_feature 1216..2493 /gene="AGO3" /note="...
XM_030325784.1 - Lynx canadensis (Canada lynx) - NCBI
PREDICTED: Manis javanica argonaute RISC component 1 (AGO1), transcript variant X10, mRNA. (8116 bp)
misc_feature 229..381 /gene="AGO1" /note="Argonaute linker 1 domain; Region: ArgoL1; pfam08699" /db_xref="CDD:370073" misc_feature 382..744 /gene="AGO1" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and Zwille; Region: PAZ_argonaute_like; cd02846" /db_xref="CDD:239212" misc_feature order(538..540,583..585,625..627,637..639,691..693, 712..714,718..720) /gene="AGO1" /note="nucleic acid-binding...
XM_017660999.2 - Manis javanica (Malayan pangolin) - NCBI
PREDICTED: Cricetulus griseus protein argonaute-3 (LOC100769090), transcript variant X4, mRNA. (3124 bp)
misc_feature 165..506 /gene="LOC100769090" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and Zwille; Region: PAZ_argonaute_like; cd02846" /db_xref="CDD:239212" misc_feature order(300..302,345..347,387..389,399..401,453..455, 474..476,480..482) /gene="LOC100769090" /note="nucleic acid-binding interface [nucleotide binding]; other site" /db_xref="CDD:239212" misc_feature 639..1916 /gene="...
XM_016974870.3 - Cricetulus griseus (Chinese hamster) - NCBI
PREDICTED: Cricetulus griseus protein argonaute-3 (LOC100769090), transcript variant X3, mRNA. (3144 bp)
misc_feature 185..526 /gene="LOC100769090" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and Zwille; Region: PAZ_argonaute_like; cd02846" /db_xref="CDD:239212" misc_feature order(320..322,365..367,407..409,419..421,473..475, 494..496,500..502) /gene="LOC100769090" /note="nucleic acid-binding interface [nucleotide binding]; other site" /db_xref="CDD:239212" misc_feature 659..1936 /gene="...
XM_016974869.3 - Cricetulus griseus (Chinese hamster) - NCBI
PREDICTED: Canis lupus dingo argonaute RISC catalytic component 3 (AGO3), transcript variant X5, mRNA. (15000 bp)
misc_feature 139..480 /gene="AGO3" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and Zwille; Region: PAZ_argonaute_like; cd02846" /db_xref="CDD:239212" misc_feature order(274..276,319..321,361..363,373..375,427..429, 448..450,454..456) /gene="AGO3" /note="nucleic acid-binding interface [nucleotide binding]; other site" /db_xref="CDD:239212" misc_feature 613..1890 /gene="AGO3" /note="PIWI...
XM_025419944.2 - Canis lupus dingo (dingo) - NCBI
PREDICTED: Canis lupus dingo argonaute RISC catalytic component 3 (AGO3), transcript variant X4, mRNA. (15060 bp)
misc_feature 199..540 /gene="AGO3" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and Zwille; Region: PAZ_argonaute_like; cd02846" /db_xref="CDD:239212" misc_feature order(334..336,379..381,421..423,433..435,487..489, 508..510,514..516) /gene="AGO3" /note="nucleic acid-binding interface [nucleotide binding]; other site" /db_xref="CDD:239212" misc_feature 673..1950 /gene="AGO3" /note="PIWI...
XM_025419943.2 - Canis lupus dingo (dingo) - NCBI
PREDICTED: Onychomys torridus protein argonaute-1 (LOC118577737), transcript variant X2, mRNA. (2502 bp)
misc_feature 156..308 /gene="LOC118577737" /note="Argonaute linker 1 domain; Region: ArgoL1; pfam08699" /db_xref="CDD:370073" misc_feature 309..671 /gene="LOC118577737" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and Zwille; Region: PAZ_argonaute_like; cd02846" /db_xref="CDD:239212" misc_feature order(465..467,510..512,552..554,564..566,618..620, 639..641,645..647) /gene="LOC118577737" /note...
XM_036178366.1 - Onychomys torridus (southern grasshopper mouse) - NCBI
PREDICTED: Cricetulus griseus protein argonaute-1 (LOC100768807), transcript variant X1, mRNA. (2550 bp)
misc_feature 235..459 /gene="LOC100768807" /note="N-terminal domain of argonaute; Region: ArgoN; pfam16486" /db_xref="CDD:374571" misc_feature 487..639 /gene="LOC100768807" /note="Argonaute linker 1 domain; Region: ArgoL1; pfam08699" /db_xref="CDD:370073" misc_feature 640..1002 /gene="LOC100768807" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and Zwille; Region: PAZ_argonaute_like; cd02846" /...
XM_035454860.1 - Cricetulus griseus (Chinese hamster) - NCBI
PREDICTED: Mirounga leonina protein argonaute-3-like (LOC118019694), transcript variant X3, mRNA. (3617 bp)
misc_feature 1415..1756 /gene="LOC118019694" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and Zwille; Region: PAZ_argonaute_like; cd02846" /db_xref="CDD:239212" misc_feature order(1550..1552,1595..1597,1637..1639,1649..1651, 1703..1705,1724..1726,1730..1732) /gene="LOC118019694" /note="nucleic acid-binding interface [nucleotide binding]; other site" /db_xref="CDD:239212" misc_feature...
XM_035019111.1 - Mirounga leonina (Southern elephant seal) - NCBI
PREDICTED: Myotis myotis argonaute RISC component 1 (AGO1), transcript variant X5, mRNA. (6925 bp)
misc_feature 228..380 /gene="AGO1" /note="Argonaute linker 1 domain; Region: ArgoL1; pfam08699" /db_xref="CDD:370073" misc_feature 381..743 /gene="AGO1" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and Zwille; Region: PAZ_argonaute_like; cd02846" /db_xref="CDD:239212" misc_feature order(537..539,582..584,624..626,636..638,690..692, 711..713,717..719) /gene="AGO1" /note="nucleic acid-binding...
XM_036351619.1 - Myotis myotis - NCBI
PREDICTED: Callithrix jacchus argonaute RISC component 1 (AGO1), transcript variant X9, mRNA. (12989 bp)
misc_feature 832..1173 /gene="AGO1" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and Zwille; Region: PAZ_argonaute_like; cd02846" /db_xref="CDD:239212" misc_feature order(967..969,1012..1014,1054..1056,1066..1068, 1120..1122,1141..1143,1147..1149) /gene="AGO1" /note="nucleic acid-binding interface [nucleotide binding]; other site" /db_xref="CDD:239212" misc_feature 1306..2583 /gene="AGO1" /...
XM_035250796.1 - Callithrix jacchus (white-tufted-ear marmoset) - NCBI
PREDICTED: Cricetulus griseus protein argonaute-1 (LOC100768807), transcript variant X2, mRNA. (2541 bp)
misc_feature 235..459 /gene="LOC100768807" /note="N-terminal domain of argonaute; Region: ArgoN; pfam16486" /db_xref="CDD:374571" misc_feature 487..639 /gene="LOC100768807" /note="Argonaute linker 1 domain; Region: ArgoL1; pfam08699" /db_xref="CDD:370073" misc_feature 640..1002 /gene="LOC100768807" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and Zwille; Region: PAZ_argonaute_like; cd02846" /...
XM_016974868.3 - Cricetulus griseus (Chinese hamster) - NCBI
PREDICTED: Ochotona princeps protein argonaute-3 (LOC101530714), transcript variant X3, mRNA. (2932 bp)
misc_feature 609..950 /gene="LOC101530714" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and Zwille; Region: PAZ_argonaute_like; cd02846" /db_xref="CDD:239212" misc_feature order(744..746,789..791,831..833,843..845,897..899, 918..920,924..926) /gene="LOC101530714" /note="nucleic acid-binding interface [nucleotide binding]; other site" /db_xref="CDD:239212" misc_feature 1083..2360 /gene="...
XM_004591587.2 - Ochotona princeps (American pika) - NCBI
PREDICTED: Ochotona princeps protein argonaute-3 (LOC101530714), transcript variant X2, mRNA. (2813 bp)
misc_feature 616..957 /gene="LOC101530714" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and Zwille; Region: PAZ_argonaute_like; cd02846" /db_xref="CDD:239212" misc_feature order(751..753,796..798,838..840,850..852,904..906, 925..927,931..933) /gene="LOC101530714" /note="nucleic acid-binding interface [nucleotide binding]; other site" /db_xref="CDD:239212" misc_feature 1090..2367 /gene="...
XM_004591588.2 - Ochotona princeps (American pika) - NCBI
PREDICTED: Callithrix jacchus argonaute RISC component 4 (AGO4), transcript variant X3, mRNA. (6804 bp)
misc_feature 212..601 /gene="AGO4" /note="N-terminal domain of argonaute; Region: ArgoN; pfam16486" /db_xref="CDD:374571" misc_feature 632..784 /gene="AGO4" /note="Argonaute linker 1 domain; Region: ArgoL1; pfam08699" /db_xref="CDD:370073" misc_feature 785..1147 /gene="AGO4" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and Zwille; Region: PAZ_argonaute_like; cd02846" /db_xref="CDD:239212"...
XM_035250789.1 - Callithrix jacchus (white-tufted-ear marmoset) - NCBI
PREDICTED: Callithrix jacchus protein argonaute-3 (LOC100387270), transcript variant X6, mRNA. (2942 bp)
misc_feature 349..690 /gene="LOC100387270" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and Zwille; Region: PAZ_argonaute_like; cd02846" /db_xref="CDD:239212" misc_feature order(484..486,529..531,571..573,583..585,637..639, 658..660,664..666) /gene="LOC100387270" /note="nucleic acid-binding interface [nucleotide binding]; other site" /db_xref="CDD:239212" misc_feature 823..2100 /gene="...
XM_035250801.1 - Callithrix jacchus (white-tufted-ear marmoset) - NCBI
PREDICTED: Callithrix jacchus protein argonaute-3 (LOC100387270), transcript variant X5, mRNA. (3021 bp)
misc_feature 428..769 /gene="LOC100387270" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and Zwille; Region: PAZ_argonaute_like; cd02846" /db_xref="CDD:239212" misc_feature order(563..565,608..610,650..652,662..664,716..718, 737..739,743..745) /gene="LOC100387270" /note="nucleic acid-binding interface [nucleotide binding]; other site" /db_xref="CDD:239212" misc_feature 902..2179 /gene="...
XM_035250800.1 - Callithrix jacchus (white-tufted-ear marmoset) - NCBI
PREDICTED: Callithrix jacchus protein argonaute-3 (LOC100387270), transcript variant X4, mRNA. (3069 bp)
misc_feature 476..817 /gene="LOC100387270" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and Zwille; Region: PAZ_argonaute_like; cd02846" /db_xref="CDD:239212" misc_feature order(611..613,656..658,698..700,710..712,764..766, 785..787,791..793) /gene="LOC100387270" /note="nucleic acid-binding interface [nucleotide binding]; other site" /db_xref="CDD:239212" misc_feature 950..2227 /gene="...
XM_035250799.1 - Callithrix jacchus (white-tufted-ear marmoset) - NCBI
PREDICTED: Callithrix jacchus protein argonaute-3 (LOC100387270), transcript variant X7, mRNA. (2761 bp)
misc_feature 168..509 /gene="LOC100387270" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and Zwille; Region: PAZ_argonaute_like; cd02846" /db_xref="CDD:239212" misc_feature order(303..305,348..350,390..392,402..404,456..458, 477..479,483..485) /gene="LOC100387270" /note="nucleic acid-binding interface [nucleotide binding]; other site" /db_xref="CDD:239212" misc_feature 642..1919 /gene="...
XM_035250802.1 - Callithrix jacchus (white-tufted-ear marmoset) - NCBI
PREDICTED: Zalophus californianus argonaute RISC component 1 (AGO1), transcript variant X5, mRNA. (7901 bp)
misc_feature 170..511 /gene="AGO1" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and Zwille; Region: PAZ_argonaute_like; cd02846" /db_xref="CDD:239212" misc_feature order(305..307,350..352,392..394,404..406,458..460, 479..481,485..487) /gene="AGO1" /note="nucleic acid-binding interface [nucleotide binding]; other site" /db_xref="CDD:239212" misc_feature 644..1921 /gene="AGO1" /note="PIWI...
XM_027606011.2 - Zalophus californianus (California sea lion) - NCBI
PREDICTED: Callithrix jacchus argonaute RISC component 1 (AGO1), transcript variant X8, mRNA. (4223 bp)
misc_feature 939..1091 /gene="AGO1" /note="Argonaute linker 1 domain; Region: ArgoL1; pfam08699" /db_xref="CDD:370073" misc_feature 1092..1454 /gene="AGO1" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and Zwille; Region: PAZ_argonaute_like; cd02846" /db_xref="CDD:239212" misc_feature order(1248..1250,1293..1295,1335..1337,1347..1349, 1401..1403,1422..1424,1428..1430) /gene="AGO1" /note="...
XM_035250795.1 - Callithrix jacchus (white-tufted-ear marmoset) - NCBI
PREDICTED: Rousettus aegyptiacus argonaute RISC catalytic component 3 (AGO3), transcript variant X8, mRNA. (15009 bp)
misc_feature 169..510 /gene="AGO3" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and Zwille; Region: PAZ_argonaute_like; cd02846" /db_xref="CDD:239212" misc_feature order(304..306,349..351,391..393,403..405,457..459, 478..480,484..486) /gene="AGO3" /note="nucleic acid-binding interface [nucleotide binding]; other site" /db_xref="CDD:239212" misc_feature 643..1920 /gene="AGO3" /note="Piwi_ago-...
XM_016147245.2 - Rousettus aegyptiacus (Egyptian rousette) - NCBI
PREDICTED: Callithrix jacchus protein argonaute-3 (LOC100387270), transcript variant X3, mRNA. (3641 bp)
misc_feature 1048..1389 /gene="LOC100387270" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and Zwille; Region: PAZ_argonaute_like; cd02846" /db_xref="CDD:239212" misc_feature order(1183..1185,1228..1230,1270..1272,1282..1284, 1336..1338,1357..1359,1363..1365) /gene="LOC100387270" /note="nucleic acid-binding interface [nucleotide binding]; other site" /db_xref="CDD:239212" misc_feature...
XM_035250798.1 - Callithrix jacchus (white-tufted-ear marmoset) - NCBI
PREDICTED: Callithrix jacchus argonaute RISC component 1 (AGO1), transcript variant X6, mRNA. (12572 bp)
misc_feature 232..384 /gene="AGO1" /note="Argonaute linker 1 domain; Region: ArgoL1; pfam08699" /db_xref="CDD:370073" misc_feature 385..747 /gene="AGO1" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and Zwille; Region: PAZ_argonaute_like; cd02846" /db_xref="CDD:239212" misc_feature order(541..543,586..588,628..630,640..642,694..696, 715..717,721..723) /gene="AGO1" /note="nucleic acid-binding...
XM_035250793.1 - Callithrix jacchus (white-tufted-ear marmoset) - NCBI
PREDICTED: Rousettus aegyptiacus argonaute RISC catalytic component 3 (AGO3), transcript variant X11, mRNA. (14978 bp)
misc_feature 138..479 /gene="AGO3" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and Zwille; Region: PAZ_argonaute_like; cd02846" /db_xref="CDD:239212" misc_feature order(273..275,318..320,360..362,372..374,426..428, 447..449,453..455) /gene="AGO3" /note="nucleic acid-binding interface [nucleotide binding]; other site" /db_xref="CDD:239212" misc_feature 612..1889 /gene="AGO3" /note="Piwi_ago-...
XM_016147248.2 - Rousettus aegyptiacus (Egyptian rousette) - NCBI
PREDICTED: Rousettus aegyptiacus argonaute RISC catalytic component 3 (AGO3), transcript variant X10, mRNA. (15014 bp)
misc_feature 174..515 /gene="AGO3" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and Zwille; Region: PAZ_argonaute_like; cd02846" /db_xref="CDD:239212" misc_feature order(309..311,354..356,396..398,408..410,462..464, 483..485,489..491) /gene="AGO3" /note="nucleic acid-binding interface [nucleotide binding]; other site" /db_xref="CDD:239212" misc_feature 648..1925 /gene="AGO3" /note="Piwi_ago-...
XM_016147247.2 - Rousettus aegyptiacus (Egyptian rousette) - NCBI
PREDICTED: Callithrix jacchus argonaute RISC component 1 (AGO1), transcript variant X7, mRNA. (5481 bp)
misc_feature 793..945 /gene="AGO1" /note="Argonaute linker 1 domain; Region: ArgoL1; pfam08699" /db_xref="CDD:370073" misc_feature 946..1308 /gene="AGO1" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and Zwille; Region: PAZ_argonaute_like; cd02846" /db_xref="CDD:239212" misc_feature order(1102..1104,1147..1149,1189..1191,1201..1203, 1255..1257,1276..1278,1282..1284) /gene="AGO1" /note="nucleic...
XM_035250794.1 - Callithrix jacchus (white-tufted-ear marmoset) - NCBI
PREDICTED: Canis lupus dingo argonaute RISC catalytic component 2 (AGO2), transcript variant X3, mRNA. (14344 bp)
misc_feature 80..304 /gene="AGO2" /note="N-terminal domain of argonaute; Region: ArgoN; pfam16486" /db_xref="CDD:374571" misc_feature 332..484 /gene="AGO2" /note="Argonaute linker 1 domain; Region: ArgoL1; pfam08699" /db_xref="CDD:370073" misc_feature 485..847 /gene="AGO2" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and Zwille; Region: PAZ_argonaute_like; cd02846" /db_xref="CDD:239212" misc_...
XM_025450841.2 - Canis lupus dingo (dingo) - NCBI
PREDICTED: Rousettus aegyptiacus argonaute RISC catalytic component 3 (AGO3), transcript variant X9, mRNA. (16316 bp)
misc_feature 1476..1817 /gene="AGO3" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and Zwille; Region: PAZ_argonaute_like; cd02846" /db_xref="CDD:239212" misc_feature order(1611..1613,1656..1658,1698..1700,1710..1712, 1764..1766,1785..1787,1791..1793) /gene="AGO3" /note="nucleic acid-binding interface [nucleotide binding]; other site" /db_xref="CDD:239212" misc_feature 1950..3227 /gene="...
XM_016147246.2 - Rousettus aegyptiacus (Egyptian rousette) - NCBI
PREDICTED: Phyllostomus discolor argonaute RISC catalytic component 3 (AGO3), transcript variant X5, mRNA. (5177 bp)
misc_feature 138..479 /gene="AGO3" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and Zwille; Region: PAZ_argonaute_like; cd02846" /db_xref="CDD:239212" misc_feature order(273..275,318..320,360..362,372..374,426..428, 447..449,453..455) /gene="AGO3" /note="nucleic acid-binding interface [nucleotide binding]; other site" /db_xref="CDD:239212" misc_feature 612..1889 /gene="AGO3" /note="PIWI...
XM_028512141.2 - Phyllostomus discolor (pale spear-nosed bat) - NCBI
PREDICTED: Phyllostomus discolor argonaute RISC catalytic component 3 (AGO3), transcript variant X3, mRNA. (5198 bp)
misc_feature 159..500 /gene="AGO3" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and Zwille; Region: PAZ_argonaute_like; cd02846" /db_xref="CDD:239212" misc_feature order(294..296,339..341,381..383,393..395,447..449, 468..470,474..476) /gene="AGO3" /note="nucleic acid-binding interface [nucleotide binding]; other site" /db_xref="CDD:239212" misc_feature 633..1910 /gene="AGO3" /note="PIWI...
XM_028512139.2 - Phyllostomus discolor (pale spear-nosed bat) - NCBI
PREDICTED: Phyllostomus discolor argonaute RISC catalytic component 3 (AGO3), transcript variant X4, mRNA. (5848 bp)
misc_feature 809..1150 /gene="AGO3" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and Zwille; Region: PAZ_argonaute_like; cd02846" /db_xref="CDD:239212" misc_feature order(944..946,989..991,1031..1033,1043..1045,1097..1099, 1118..1120,1124..1126) /gene="AGO3" /note="nucleic acid-binding interface [nucleotide binding]; other site" /db_xref="CDD:239212" misc_feature 1283..2560 /gene="AGO3" /note...
XM_028512140.2 - Phyllostomus discolor (pale spear-nosed bat) - NCBI
PREDICTED: Manis javanica argonaute RISC component 1 (AGO1), transcript variant X7, mRNA. (8635 bp)
misc_feature 328..720 /gene="AGO1" /note="N-terminal domain of argonaute; Region: ArgoN; pfam16486" /db_xref="CDD:374571" misc_feature 748..900 /gene="AGO1" /note="Argonaute linker 1 domain; Region: ArgoL1; pfam08699" /db_xref="CDD:370073" misc_feature 901..1263 /gene="AGO1" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and Zwille; Region: PAZ_argonaute_like; cd02846" /db_xref="CDD:239212"...
XM_017660998.2 - Manis javanica (Malayan pangolin) - NCBI
PREDICTED: Cricetulus griseus protein argonaute-1 (LOC100768807), transcript variant X4, mRNA. (2409 bp)
misc_feature 205..429 /gene="LOC100768807" /note="N-terminal domain of argonaute; Region: ArgoN; pfam16486" /db_xref="CDD:374571" misc_feature 457..609 /gene="LOC100768807" /note="Argonaute linker 1 domain; Region: ArgoL1; pfam08699" /db_xref="CDD:370073" misc_feature 610..972 /gene="LOC100768807" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and Zwille; Region: PAZ_argonaute_like; cd02846" /...
XM_035439615.1 - Cricetulus griseus (Chinese hamster) - NCBI
PREDICTED: Manis javanica argonaute RISC component 1 (AGO1), transcript variant X6, mRNA. (8644 bp)
misc_feature 328..720 /gene="AGO1" /note="N-terminal domain of argonaute; Region: ArgoN; pfam16486" /db_xref="CDD:374571" misc_feature 748..900 /gene="AGO1" /note="Argonaute linker 1 domain; Region: ArgoL1; pfam08699" /db_xref="CDD:370073" misc_feature 901..1263 /gene="AGO1" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and Zwille; Region: PAZ_argonaute_like; cd02846" /db_xref="CDD:239212"...
XM_017660997.2 - Manis javanica (Malayan pangolin) - NCBI
PREDICTED: Phyllostomus discolor argonaute RISC component 1 (AGO1), transcript variant X3, mRNA. (8112 bp)
misc_feature 215..367 /gene="AGO1" /note="Argonaute linker 1 domain; Region: ArgoL1; pfam08699" /db_xref="CDD:370073" misc_feature 368..730 /gene="AGO1" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and Zwille; Region: PAZ_argonaute_like; cd02846" /db_xref="CDD:239212" misc_feature order(524..526,569..571,611..613,623..625,677..679, 698..700,704..706) /gene="AGO1" /note="nucleic acid-binding...
XM_036025769.1 - Phyllostomus discolor (pale spear-nosed bat) - NCBI
PREDICTED: Manis javanica argonaute RISC component 1 (AGO1), transcript variant X3, mRNA. (8692 bp)
misc_feature 328..720 /gene="AGO1" /note="N-terminal domain of argonaute; Region: ArgoN; pfam16486" /db_xref="CDD:318646" misc_feature 748..900 /gene="AGO1" /note="Argonaute linker 1 domain; Region: ArgoL1; pfam08699" /db_xref="CDD:312283" misc_feature 901..1263 /gene="AGO1" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and Zwille; Region: PAZ_argonaute_like; cd02846" /db_xref="CDD:239212"...
XM_017660994.2 - Manis javanica (Malayan pangolin) - NCBI

Data Export:

Maximum 10000 results can be retrieved as Tab-delimited text or JSON format.

Debug Info:

Redirect URI : http://ggrna.dbcls.jp/Argonaute+%22PAZ+domain%22
lang : en | div : | spe : | query_string : Argonaute "PAZ domain" | format : html | download :

0.000 | 0.000 | search_start;
0.081 | 0.081 | count_done; http://172.18.8.71:7700/v1/refseq/query?q=((full_search:*:Argonaute)%7C(nt:Argonaute)%7C(aa:Argonaute))?to=0&format=json
0.095 | 0.014 | count_done; http://172.18.8.71:7700/v1/refseq/query?q=((full_search:*:PAZ+domain)%7C(nt:PAZ+domain)%7C(aa:PAZ+domain))?to=0&format=json
0.269 | 0.174 | search_done; http://172.18.8.71:7700/v1/refseq/query?q=((full_search:*:Argonaute)%7C(nt:Argonaute)%7C(aa:Argonaute))%26((full_search:*:PAZ+domain)%7C(nt:PAZ+domain)%7C(aa:PAZ+domain))?to=49?from=0?snippet=full_search?drilldown=source?get=accession,version,gi,length,symbol,synonym,geneid,division,source,definition&format=json
0.278 | 0.009 | cgi_end;

GGRNA ver.2 by @meso_cacase at DBCLS
This page is licensed under a Creative Commons Attribution 4.0 International License (CC BY 4.0).

If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596. [Full Text]