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2026-10-27 05:14:00, GGRNA : RefSeq release 233 (Jan, 2026)

Summary:

Results:

Matches are highlighted with green background. Overlapping matches are dark colored.

Xenopus tropicalis POU class 4 homeobox 4 (pou4f4), mRNA. (2186 bp)
LOCUS NM_001097307 2186 bp mRNA linear VRT 02-MAR-2021 DEFINITION Xenopus tropicalis POU class 4 homeobox 4 (pou4f4), mRNA. ACCESSION NM_001097307 VERSION NM_001097307.1 KEYWORDS RefSeq. SOURCE Xenopus tropicalis (tropical clawed frog) ORGANISM Xenopus tropicalis Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Silurana. REFERENCE COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC135127.1. ##Evidence-Data-START## Transcript exon...
Synonym: brn3a; Brn3d; oct-t1; pou4f1.2; rdc-1
NM_001097307.1 - Xenopus tropicalis (tropical clawed frog) - NCBI - UCSC - Xenbase
Xenopus tropicalis Brachyury-inducible homeobox 1, gene 1 (bix1), mRNA. (1534 bp)
LOCUS NM_203516 1534 bp mRNA linear VRT 02-OCT-2024 DEFINITION Xenopus tropicalis Brachyury-inducible homeobox 1, gene 1 (bix1), mRNA. ACCESSION NM_203516 VERSION NM_203516.1 KEYWORDS RefSeq. SOURCE Xenopus tropicalis (tropical clawed frog) ORGANISM Xenopus tropicalis Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Silurana. REFERENCE COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from AY157639.1. ##Evidence-Data-START## Transcript...
Synonym: bix.1; bix1.1; bix3; tBix
NM_203516.1 - Xenopus tropicalis (tropical clawed frog) - NCBI - UCSC - Xenbase
Xenopus tropicalis VENT homeobox 3, gene 2 (ventx3.2), mRNA. (1036 bp)
LOCUS NM_001129916 1036 bp mRNA linear VRT 04-JUN-2024 DEFINITION Xenopus tropicalis VENT homeobox 3, gene 2 (ventx3.2), mRNA. ACCESSION NM_001129916 VERSION NM_001129916.1 KEYWORDS RefSeq. SOURCE Xenopus tropicalis (tropical clawed frog) ORGANISM Xenopus tropicalis Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Silurana. REFERENCE COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC167675.1. ##Evidence-Data-START## Transcript exon...
Synonym: vex1; Xvex-1
NM_001129916.1 - Xenopus tropicalis (tropical clawed frog) - NCBI - UCSC - Xenbase
Xenopus tropicalis TGFB induced factor homeobox 1 (tgif1), mRNA. (2042 bp)
LOCUS NM_204051 2042 bp mRNA linear VRT 14-OCT-2022 DEFINITION Xenopus tropicalis TGFB induced factor homeobox 1 (tgif1), mRNA. ACCESSION NM_204051 VERSION NM_204051.1 KEYWORDS RefSeq. SOURCE Xenopus tropicalis (tropical clawed frog) ORGANISM Xenopus tropicalis Eukaryota; Metazoa; Chordata; Craniata...DNA base contacts [nucleotide binding]; other site" /db_xref="CDD:238039" misc_feature 459..575 /gene="tgif1" /gene_synonym="hpe4; tgif" /note="Homeobox KN domain; Region: Homeobox_KN; pfam05920" /db_xref="CDD:428673" exon 316..542 /gene="tgif1" /gene_synonym="hpe4; tgif" /inference="alignment:...
Synonym: hpe4; tgif
NM_204051.1 - Xenopus tropicalis (tropical clawed frog) - NCBI - UCSC - Xenbase
Xenopus tropicalis homeobox C8 (hoxc8), mRNA. (2285 bp)
LOCUS NM_001006786 2285 bp mRNA linear VRT 14-OCT-2022 DEFINITION Xenopus tropicalis homeobox C8 (hoxc8), mRNA. ACCESSION NM_001006786 VERSION NM_001006786.1 KEYWORDS RefSeq. SOURCE Xenopus tropicalis (tropical clawed frog) ORGANISM Xenopus tropicalis Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Silurana. REFERENCE COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC075597.1. ##Evidence-Data-START## Transcript exon combination...
Synonym: hox3; hox3a; hoxc-8; xhoxc8
NM_001006786.1 - Xenopus tropicalis (tropical clawed frog) - NCBI - UCSC - Xenbase
Xenopus tropicalis VENT homeobox 3 gene 1 (ventx3), mRNA. (1108 bp)
LOCUS NM_001114266 1108 bp mRNA linear VRT 16-JUN-2023 DEFINITION Xenopus tropicalis VENT homeobox 3 gene 1 (ventx3), mRNA. ACCESSION NM_001114266 VERSION NM_001114266.1 KEYWORDS RefSeq. SOURCE Xenopus tropicalis (tropical clawed frog) ORGANISM Xenopus tropicalis Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Silurana. REFERENCE COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC158379.1. ##Evidence-Data-START## Transcript exon...
Synonym: vent-3; ventx3.1
NM_001114266.1 - Xenopus tropicalis (tropical clawed frog) - NCBI - UCSC - Xenbase
Xenopus tropicalis msh homeobox 1 (msx1), mRNA. (1601 bp)
LOCUS NM_001037252 1601 bp mRNA linear VRT 14-OCT-2022 DEFINITION Xenopus tropicalis msh homeobox 1 (msx1), mRNA. ACCESSION NM_001037252 VERSION NM_001037252.1 KEYWORDS RefSeq. SOURCE Xenopus tropicalis (tropical clawed frog) ORGANISM Xenopus tropicalis Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Silurana. REFERENCE COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from CR855795.2. ##Evidence-Data-START## Transcript exon combination...
Synonym: hox-7; hox7; hyd1; msx-1; msx1-a; msx1-b; Xhox-7.1; Xmsx-1; xmsx1
NM_001037252.1 - Xenopus tropicalis (tropical clawed frog) - NCBI - UCSC - Xenbase
Xenopus tropicalis SHOX homeobox 2 (shox2), mRNA. (2145 bp)
LOCUS NM_001100224 2145 bp mRNA linear VRT 06-JUL-2023 DEFINITION Xenopus tropicalis SHOX homeobox 2 (shox2), mRNA. ACCESSION NM_001100224 VERSION NM_001100224.1 KEYWORDS RefSeq. SOURCE Xenopus tropicalis (tropical clawed frog) ORGANISM Xenopus tropicalis Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Silurana. REFERENCE COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from DQ675518.1. ##Evidence-Data-START## Transcript exon...
Synonym: og12; og12x; ogi2x; shot
NM_001100224.1 - Xenopus tropicalis (tropical clawed frog) - NCBI - UCSC - Xenbase
Xenopus tropicalis VENT homeobox 2 gene 1 (ventx2), mRNA. (1283 bp)
LOCUS NM_203531 1283 bp mRNA linear VRT 16-JUN-2023 DEFINITION Xenopus tropicalis VENT homeobox 2 gene 1 (ventx2), mRNA. ACCESSION NM_203531 VERSION NM_203531.1 KEYWORDS RefSeq. SOURCE Xenopus tropicalis (tropical clawed frog) ORGANISM Xenopus tropicalis Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Silurana. REFERENCE COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from AY187016.1. ##Evidence-Data-START## Transcript exon combination...
Synonym: ventx2.1; ventx2.1-a; ventx2.1-b; vox; vox1; Xbr-1a; xom; xvent-2; xvent-2b; Xvr-11b
NM_203531.1 - Xenopus tropicalis (tropical clawed frog) - NCBI - UCSC - Xenbase
Xenopus tropicalis SIX homeobox 1 (six1), mRNA. (1432 bp)
LOCUS NM_001100223 1432 bp mRNA linear VRT 16-APR-2022 DEFINITION Xenopus tropicalis SIX homeobox 1 (six1), mRNA. ACCESSION NM_001100223 VERSION NM_001100223.1 KEYWORDS RefSeq. SOURCE Xenopus tropicalis (tropical clawed frog) ORGANISM Xenopus tropicalis Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Silurana. REFERENCE COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC135608.1. ##Evidence-Data-START## Transcript exon combination...
Synonym: bos3; dfna23; tip39; XSix1
NM_001100223.1 - Xenopus tropicalis (tropical clawed frog) - NCBI - UCSC - Xenbase
Xenopus tropicalis homeobox B4 (hoxb4), mRNA. (1459 bp)
LOCUS NM_001123015 1459 bp mRNA linear VRT 29-OCT-2016 DEFINITION Xenopus tropicalis homeobox B4 (hoxb4), mRNA. ACCESSION NM_001123015 VERSION NM_001123015.1 KEYWORDS RefSeq. SOURCE Xenopus tropicalis (tropical clawed frog) ORGANISM Xenopus tropicalis Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Silurana. REFERENCE COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC161550.1. ##Evidence-Data-START## Transcript exon combination...
Synonym: hox-2.6; hox2; hox2f; XHox-1a; XHox-b4; xHox1a
NM_001123015.1 - Xenopus tropicalis (tropical clawed frog) - NCBI - UCSC - Xenbase
Xenopus tropicalis distal-less homeobox 1 (dlx1), mRNA. (3937 bp)
LOCUS NM_001100257 3937 bp mRNA linear VRT 29-OCT-2016 DEFINITION Xenopus tropicalis distal-less homeobox 1 (dlx1), mRNA. ACCESSION NM_001100257 VERSION NM_001100257.1 KEYWORDS RefSeq. SOURCE Xenopus tropicalis (tropical clawed frog) ORGANISM Xenopus tropicalis Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Silurana. REFERENCE COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC127554.1. ##Evidence-Data-START## Transcript exon...
NM_001100257.1 - Xenopus tropicalis (tropical clawed frog) - NCBI - UCSC - Xenbase
Xenopus tropicalis VENT homeobox 1 gene 1 (ventx1), mRNA. (1074 bp)
LOCUS NM_001114235 1074 bp mRNA linear VRT 16-JUN-2023 DEFINITION Xenopus tropicalis VENT homeobox 1 gene 1 (ventx1), mRNA. ACCESSION NM_001114235 VERSION NM_001114235.1 KEYWORDS RefSeq. SOURCE Xenopus tropicalis (tropical clawed frog) ORGANISM Xenopus tropicalis Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Silurana. REFERENCE COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC158394.1. ##Evidence-Data-START## Transcript exon...
Synonym: PV.1; ventx1.1; ventx1.1-a; ventx1.1-b; Xvent-1b
NM_001114235.1 - Xenopus tropicalis (tropical clawed frog) - NCBI - UCSC - Xenbase
Xenopus tropicalis homeobox B5 (hoxb5), mRNA. (1432 bp)
LOCUS NM_001101024 1432 bp mRNA linear VRT 29-OCT-2016 DEFINITION Xenopus tropicalis homeobox B5 (hoxb5), mRNA. ACCESSION NM_001101024 VERSION NM_001101024.1 KEYWORDS RefSeq. SOURCE Xenopus tropicalis (tropical clawed frog) ORGANISM Xenopus tropicalis Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Silurana. REFERENCE COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC135705.1. ##Evidence-Data-START## Transcript exon combination...
Synonym: hho.c10; hox2; hox2.1; hox2a; hu-1; Xhox1B; XlHbox4
NM_001101024.1 - Xenopus tropicalis (tropical clawed frog) - NCBI - UCSC - Xenbase
Xenopus tropicalis homeobox B3 (hoxb3), mRNA. (1964 bp)
LOCUS NM_001015971 1964 bp mRNA linear VRT 28-OCT-2016 DEFINITION Xenopus tropicalis homeobox B3 (hoxb3), mRNA. ACCESSION NM_001015971 VERSION NM_001015971.2 KEYWORDS RefSeq. SOURCE Xenopus tropicalis (tropical clawed frog) ORGANISM Xenopus tropicalis Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Silurana. REFERENCE COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from CR848404.2. On Oct 14, 2005 this sequence version replaced NM...
Synonym: hox-2.7; hox2; hox2.7; hox2g; hoxb-3
NM_001015971.2 - Xenopus tropicalis (tropical clawed frog) - NCBI - UCSC - Xenbase
Xenopus tropicalis SIX homeobox 6 (six6), mRNA. (1076 bp)
LOCUS NM_001100226 1076 bp mRNA linear VRT 03-DEC-2023 DEFINITION Xenopus tropicalis SIX homeobox 6 (six6), mRNA. ACCESSION NM_001100226 VERSION NM_001100226.1 KEYWORDS RefSeq. SOURCE Xenopus tropicalis (tropical clawed frog) ORGANISM Xenopus tropicalis Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Silurana. REFERENCE COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC135852.1. ##Evidence-Data-START## Transcript exon combination...
Synonym: hpe2; mcopct2; optx2; six3.2; Six6.1; Six6.2; six9; XOptx2; XSix3; xSix6; XSix6.1; xsix6.2
NM_001100226.1 - Xenopus tropicalis (tropical clawed frog) - NCBI - UCSC - Xenbase
Xenopus tropicalis HOP homeobox (hopx), mRNA. (1102 bp)
LOCUS NM_001097157 1102 bp mRNA linear VRT 28-OCT-2016 DEFINITION Xenopus tropicalis HOP homeobox (hopx), mRNA. ACCESSION NM_001097157 VERSION NM_001097157.1 KEYWORDS RefSeq. SOURCE Xenopus tropicalis (tropical clawed frog) ORGANISM Xenopus tropicalis Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Silurana. REFERENCE COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC121643.1. ##Evidence-Data-START## Transcript exon combination...
Synonym: cameo; hod; hop; lagy; necc1; ob1; smap31; toto
NM_001097157.1 - Xenopus tropicalis (tropical clawed frog) - NCBI - UCSC - Xenbase
Xenopus tropicalis POU class 5 homeobox 3, gene 1 (pou5f3), mRNA. (2454 bp)
LOCUS NM_001285474 2454 bp mRNA linear VRT 16-JUN-2023 DEFINITION Xenopus tropicalis POU class 5 homeobox 3, gene 1 (pou5f3), mRNA. ACCESSION NM_001285474 XM_002941971 VERSION NM_001285474.1 KEYWORDS RefSeq. SOURCE Xenopus tropicalis (tropical clawed frog) ORGANISM Xenopus tropicalis Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Silurana. REFERENCE COMMENT VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from CF217105.1, CX487420.2,...
Synonym: Oct-91; oct4; oct79; oct91; oct92; pou5f3.1; XLPOU91; xoct-91; xoct91
NM_001285474.1 - Xenopus tropicalis (tropical clawed frog) - NCBI - UCSC - Xenbase
Xenopus tropicalis LIM homeobox 1 (lhx1), mRNA. (2649 bp)
LOCUS NM_001100228 2649 bp mRNA linear VRT 14-OCT-2022 DEFINITION Xenopus tropicalis LIM homeobox 1 (lhx1), mRNA. ACCESSION NM_001100228 VERSION NM_001100228.1 KEYWORDS RefSeq. SOURCE Xenopus tropicalis (tropical clawed frog) ORGANISM Xenopus tropicalis Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Silurana. REFERENCE COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC135731.1. ##Evidence-Data-START## Transcript exon combination...
Synonym: lim-1; lim1; Xlim-1; Xlim1
NM_001100228.1 - Xenopus tropicalis (tropical clawed frog) - NCBI - UCSC - Xenbase
Xenopus tropicalis POU class 3 homeobox 2 (pou3f2), mRNA. (3616 bp)
LOCUS NM_001276377 3616 bp mRNA linear VRT 30-OCT-2016 DEFINITION Xenopus tropicalis POU class 3 homeobox 2 (pou3f2), mRNA. ACCESSION NM_001276377 XM_002934872 VERSION NM_001276377.1 KEYWORDS RefSeq. SOURCE Xenopus tropicalis (tropical clawed frog) ORGANISM Xenopus tropicalis Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Silurana. REFERENCE COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from AB557604.1, CN113142.1, CN113141.1,...
NM_001276377.1 - Xenopus tropicalis (tropical clawed frog) - NCBI - UCSC - Xenbase
Xenopus tropicalis cone-rod homeobox (crx), mRNA. (2162 bp)
LOCUS NM_001016021 2162 bp mRNA linear VRT 02-FEB-2024 DEFINITION Xenopus tropicalis cone-rod homeobox (crx), mRNA. ACCESSION NM_001016021 VERSION NM_001016021.2 KEYWORDS RefSeq. SOURCE Xenopus tropicalis (tropical clawed frog) ORGANISM Xenopus tropicalis Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Silurana. REFERENCE COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from CR848167.2. On Oct 14, 2005 this sequence version replaced NM...
Synonym: cord2; crd; crx-a; crx-b; otx5; otx5b; rx; Xotx5; Xotx5b
NM_001016021.2 - Xenopus tropicalis (tropical clawed frog) - NCBI - UCSC - Xenbase
Xenopus tropicalis one cut homeobox 1 (onecut1), mRNA. (1906 bp)
LOCUS NM_001100260 1906 bp mRNA linear VRT 29-OCT-2016 DEFINITION Xenopus tropicalis one cut homeobox 1 (onecut1), mRNA. ACCESSION NM_001100260 VERSION NM_001100260.1 KEYWORDS RefSeq. SOURCE Xenopus tropicalis (tropical clawed frog) ORGANISM Xenopus tropicalis Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Silurana. REFERENCE COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC135775.1. ##Evidence-Data-START## Transcript exon...
Synonym: hnf-6; hnf6; hnf6a
NM_001100260.1 - Xenopus tropicalis (tropical clawed frog) - NCBI - UCSC - Xenbase
Xenopus tropicalis pre-B-cell leukemia homeobox 1 (pbx1), mRNA. (3147 bp)
LOCUS NM_001142077 3147 bp mRNA linear VRT 05-FEB-2024 DEFINITION Xenopus tropicalis pre-B-cell leukemia homeobox 1 (pbx1), mRNA. ACCESSION NM_001142077 VERSION NM_001142077.1 KEYWORDS RefSeq. SOURCE Xenopus tropicalis (tropical clawed frog) ORGANISM Xenopus tropicalis Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Silurana. REFERENCE COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC168027.1. ##Evidence-Data-START## CDS exon...
Synonym: pbx1b; Xpbx1; Xpbx1b
NM_001142077.1 - Xenopus tropicalis (tropical clawed frog) - NCBI - UCSC - Xenbase
PREDICTED: Xenopus tropicalis pituitary homeobox 3-like [provisional] (homeobox100496651-provisional), mRNA. (1234 bp)
LOCUS XM_002941764 1234 bp mRNA linear VRT 18-DEC-2019 DEFINITION PREDICTED: Xenopus tropicalis pituitary homeobox 3-like [provisional] (homeobox100496651-provisional), mRNA. ACCESSION XM_002941764 VERSION XM_002941764.5 DBLINK BioProject: PRJNA205740 KEYWORDS RefSeq. SOURCE Xenopus tropicalis (tropical clawed frog) ORGANISM Xenopus tropicalis Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Silurana. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived...
XM_002941764.5 - Xenopus tropicalis (tropical clawed frog) - NCBI - UCSC - Xenbase
Xenopus tropicalis GS homeobox 1 (gsx1), mRNA. (1456 bp)
LOCUS NM_001045789 1456 bp mRNA linear VRT 22-DEC-2019 DEFINITION Xenopus tropicalis GS homeobox 1 (gsx1), mRNA. ACCESSION NM_001045789 VERSION NM_001045789.1 KEYWORDS RefSeq. SOURCE Xenopus tropicalis (tropical clawed frog) ORGANISM Xenopus tropicalis Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Silurana. REFERENCE COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from DQ195530.1. ##Evidence-Data-START## Transcript exon combination...
Synonym: gsh-1; gsh1; Xgsh1
NM_001045789.1 - Xenopus tropicalis (tropical clawed frog) - NCBI - UCSC - Xenbase
Xenopus tropicalis UNC homeobox (uncx), mRNA. (1479 bp)
LOCUS NM_001318744 1479 bp mRNA linear VRT 22-DEC-2019 DEFINITION Xenopus tropicalis UNC homeobox (uncx), mRNA. ACCESSION NM_001318744 XM_002938411 VERSION NM_001318744.1 KEYWORDS RefSeq. SOURCE Xenopus tropicalis (tropical clawed frog) ORGANISM Xenopus tropicalis Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Silurana. COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from KT351730.1. On Jan 9, 2016 this sequence version replaced XM...
Synonym: uncx-4.1; uncx4.1
NM_001318744.1 - Xenopus tropicalis (tropical clawed frog) - NCBI - UCSC - Xenbase
Xenopus tropicalis notochord homeobox (not), mRNA. (1523 bp)
LOCUS NM_001171198 1523 bp mRNA linear VRT 22-DEC-2019 DEFINITION Xenopus tropicalis notochord homeobox (not), mRNA. ACCESSION NM_001171198 VERSION NM_001171198.1 KEYWORDS RefSeq. SOURCE Xenopus tropicalis (tropical clawed frog) ORGANISM Xenopus tropicalis Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Silurana. COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from CT025280.2. ##Evidence-Data-START## Transcript exon combination ::...
Synonym: flh; not-a; not-b; not1; noto; Xnot; Xnot-2; Xnot1; Xnot2; Znot
NM_001171198.1 - Xenopus tropicalis (tropical clawed frog) - NCBI - UCSC - Xenbase
Xenopus tropicalis PBX/knotted 1 homeobox 2 (pknox2), mRNA. (3072 bp)
LOCUS NM_001127427 3072 bp mRNA linear VRT 22-DEC-2019 DEFINITION Xenopus tropicalis PBX/knotted 1 homeobox 2 (pknox2), mRNA. ACCESSION NM_001127427 VERSION NM_001127427.1 KEYWORDS RefSeq. SOURCE Xenopus tropicalis (tropical clawed frog) ORGANISM Xenopus tropicalis Eukaryota; Metazoa; Chordata;...misc_feature 451..708 /gene="pknox2" /gene_synonym="prep2" /note="N-terminal of Homeobox Meis and PKNOX1; Region: Meis_PKNOX_N; pfam16493" /db_xref="CDD:465140" misc_feature order(1033..1047,1051..1053,1111..1113,1129..1131, 1168..1170,1174..1179,1186..1191,1195..1203) /gene="pknox2" /gene_synonym="...
Synonym: prep2
NM_001127427.1 - Xenopus tropicalis (tropical clawed frog) - NCBI - UCSC - Xenbase
Xenopus tropicalis homeobox A5 (hoxa5), mRNA. (1673 bp)
LOCUS NM_001011405 1673 bp mRNA linear VRT 22-DEC-2019 DEFINITION Xenopus tropicalis homeobox A5 (hoxa5), mRNA. ACCESSION NM_001011405 VERSION NM_001011405.1 KEYWORDS RefSeq. SOURCE Xenopus tropicalis (tropical clawed frog) ORGANISM Xenopus tropicalis Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Silurana. REFERENCE COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC088772.1. ##Evidence-Data-START## Transcript exon combination...
Synonym: hox-a5; hox1; hox1.3; hox1c
NM_001011405.1 - Xenopus tropicalis (tropical clawed frog) - NCBI - UCSC - Xenbase
PREDICTED: Xenopus tropicalis Meis homeobox 2 (meis2), transcript variant X4, mRNA. (2761 bp)
LOCUS XM_012967804 2761 bp mRNA linear VRT 18-DEC-2019 DEFINITION PREDICTED: Xenopus tropicalis Meis homeobox 2 (meis2), transcript variant X4, mRNA. ACCESSION XM_012967804 VERSION XM_012967804.3 DBLINK BioProject: PRJNA205740 KEYWORDS RefSeq. SOURCE Xenopus tropicalis (tropical clawed frog)...misc_feature 573..827 /gene="meis2" /gene_synonym="hst18361; mrg1" /note="N-terminal of Homeobox Meis and PKNOX1; Region: Meis_PKNOX_N; pfam16493" /db_xref="CDD:465140" misc_feature 1089..1205 /gene="meis2" /gene_synonym="hst18361; mrg1" /note="Homeobox KN domain; Region: Homeobox_KN; pfam05920" /db...
Synonym: hst18361; mrg1
XM_012967804.3 - Xenopus tropicalis (tropical clawed frog) - NCBI - UCSC - Xenbase
PREDICTED: Xenopus tropicalis Meis homeobox 2 (meis2), transcript variant X6, mRNA. (2739 bp)
LOCUS XM_012967806 2739 bp mRNA linear VRT 18-DEC-2019 DEFINITION PREDICTED: Xenopus tropicalis Meis homeobox 2 (meis2), transcript variant X6, mRNA. ACCESSION XM_012967806 VERSION XM_012967806.3 DBLINK BioProject: PRJNA205740 KEYWORDS RefSeq. SOURCE Xenopus tropicalis (tropical clawed frog)...misc_feature 572..826 /gene="meis2" /gene_synonym="hst18361; mrg1" /note="N-terminal of Homeobox Meis and PKNOX1; Region: Meis_PKNOX_N; pfam16493" /db_xref="CDD:465140" misc_feature 1088..1204 /gene="meis2" /gene_synonym="hst18361; mrg1" /note="Homeobox KN domain; Region: Homeobox_KN; pfam05920" /db...
Synonym: hst18361; mrg1
XM_012967806.3 - Xenopus tropicalis (tropical clawed frog) - NCBI - UCSC - Xenbase
Xenopus tropicalis GS homeobox 2 (gsx2), mRNA. (1216 bp)
LOCUS NM_001017168 1216 bp mRNA linear VRT 22-DEC-2019 DEFINITION Xenopus tropicalis GS homeobox 2 (gsx2), mRNA. ACCESSION NM_001017168 VERSION NM_001017168.2 KEYWORDS RefSeq. SOURCE Xenopus tropicalis (tropical clawed frog) ORGANISM Xenopus tropicalis Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Silurana. REFERENCE COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from CR855836.2. On Oct 14, 2005 this sequence version replaced NM...
Synonym: gsh2
NM_001017168.2 - Xenopus tropicalis (tropical clawed frog) - NCBI - UCSC - Xenbase
Xenopus tropicalis distal-less homeobox 3 (dlx3), mRNA. (1854 bp)
less homeo box 3" /codon_start=1 /product="homeobox protein DLX-3" /protein_id="NP_001025566.1" /db_xref="GeneID:594954" /db_xref="Xenbase:XB-GENE-5879293" /translation="MSGSYEKKMAVLTDLTTSCHPVTKDSPTLPESTATDMGYYSGHLSGGQHDFFQTQAYSPSISSYGYHHPHHQYNFNGLVGNESFLPKDDYQYGGGYRAFGHYREPPVPETVSVKEEPETEVRMVNGKPKKIRKPRTIYSSYQLAALQRRFQKAQYLALPERAELAAQLGLTQTQVKIWFQNRRSKFKKLYKTGEGPGLEHSPNNSDSMACNSPSSPPVWDNSRSRTPSLPPCSSPSYMENYHPWYTQQTQPGQHLQPSEVMHQPPSNTVY" misc_feature 115..375 /gene="dlx3" /gene_synonym="ai4; dlx3-a; dlx3-b; tdo; Xdll-2; xdlx3" /note="Homeobox protein distal-less-like N terminal; Region: DLL_N...
Synonym: ai4; dlx3-a; dlx3-b; tdo; Xdll-2; xdlx3
NM_001030395.1 - Xenopus tropicalis (tropical clawed frog) - NCBI - UCSC - Xenbase
Xenopus tropicalis caudal type homeobox 2 (cdx2), mRNA. (2777 bp)
LOCUS NM_203878 2777 bp mRNA linear VRT 22-DEC-2019 DEFINITION Xenopus tropicalis caudal type homeobox 2 (cdx2), mRNA. ACCESSION NM_203878 VERSION NM_203878.1 KEYWORDS RefSeq. SOURCE Xenopus tropicalis (tropical clawed frog) ORGANISM Xenopus tropicalis Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Silurana. REFERENCE COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC063344.1. ##Evidence-Data-START## Transcript exon combination...
Synonym: cad2; cdx-2; cdx-3; cdx3; cdx3-like; cdxx; xcad1; xcad2; Xcaudal2; xtcad1
NM_203878.1 - Xenopus tropicalis (tropical clawed frog) - NCBI - UCSC - Xenbase
PREDICTED: Xenopus tropicalis Meis homeobox 2 (meis2), transcript variant X5, mRNA. (3485 bp)
LOCUS XM_012967805 3485 bp mRNA linear VRT 18-DEC-2019 DEFINITION PREDICTED: Xenopus tropicalis Meis homeobox 2 (meis2), transcript variant X5, mRNA. ACCESSION XM_012967805 VERSION XM_012967805.3 DBLINK BioProject: PRJNA205740 KEYWORDS RefSeq. SOURCE Xenopus tropicalis (tropical clawed frog)...misc_feature 1279..1533 /gene="meis2" /gene_synonym="hst18361; mrg1" /note="N-terminal of Homeobox Meis and PKNOX1; Region: Meis_PKNOX_N; pfam16493" /db_xref="CDD:465140" misc_feature order(1795..1797,1924..1926,1933..1938,1945..1947) /gene="meis2" /gene_synonym="hst18361; mrg1" /note="specific DNA...
Synonym: hst18361; mrg1
XM_012967805.3 - Xenopus tropicalis (tropical clawed frog) - NCBI - UCSC - Xenbase
PREDICTED: Xenopus tropicalis Meis homeobox 2 (meis2), transcript variant X3, mRNA. (3507 bp)
LOCUS XM_012967803 3507 bp mRNA linear VRT 18-DEC-2019 DEFINITION PREDICTED: Xenopus tropicalis Meis homeobox 2 (meis2), transcript variant X3, mRNA. ACCESSION XM_012967803 VERSION XM_012967803.3 DBLINK BioProject: PRJNA205740 KEYWORDS RefSeq. SOURCE Xenopus tropicalis (tropical clawed frog)...misc_feature 1280..1534 /gene="meis2" /gene_synonym="hst18361; mrg1" /note="N-terminal of Homeobox Meis and PKNOX1; Region: Meis_PKNOX_N; pfam16493" /db_xref="CDD:465140" misc_feature order(1796..1798,1925..1927,1934..1939,1946..1948) /gene="meis2" /gene_synonym="hst18361; mrg1" /note="specific DNA...
Synonym: hst18361; mrg1
XM_012967803.3 - Xenopus tropicalis (tropical clawed frog) - NCBI - UCSC - Xenbase
PREDICTED: Xenopus tropicalis Meis homeobox 2 (meis2), transcript variant X2, mRNA. (2773 bp)
LOCUS XM_012967802 2773 bp mRNA linear VRT 18-DEC-2019 DEFINITION PREDICTED: Xenopus tropicalis Meis homeobox 2 (meis2), transcript variant X2, mRNA. ACCESSION XM_012967802 VERSION XM_012967802.3 DBLINK BioProject: PRJNA205740 KEYWORDS RefSeq. SOURCE Xenopus tropicalis (tropical clawed frog)...misc_feature 567..821 /gene="meis2" /gene_synonym="hst18361; mrg1" /note="N-terminal of Homeobox Meis and PKNOX1; Region: Meis_PKNOX_N; pfam16493" /db_xref="CDD:465140" misc_feature order(1083..1085,1212..1214,1221..1226,1233..1235) /gene="meis2" /gene_synonym="hst18361; mrg1" /note="specific DNA...
Synonym: hst18361; mrg1
XM_012967802.3 - Xenopus tropicalis (tropical clawed frog) - NCBI - UCSC - Xenbase
PREDICTED: Xenopus tropicalis Meis homeobox 2 (meis2), transcript variant X1, mRNA. (2796 bp)
LOCUS XM_012967801 2796 bp mRNA linear VRT 18-DEC-2019 DEFINITION PREDICTED: Xenopus tropicalis Meis homeobox 2 (meis2), transcript variant X1, mRNA. ACCESSION XM_012967801 VERSION XM_012967801.3 DBLINK BioProject: PRJNA205740 KEYWORDS RefSeq. SOURCE Xenopus tropicalis (tropical clawed frog)...misc_feature 569..823 /gene="meis2" /gene_synonym="hst18361; mrg1" /note="N-terminal of Homeobox Meis and PKNOX1; Region: Meis_PKNOX_N; pfam16493" /db_xref="CDD:465140" misc_feature order(1085..1087,1214..1216,1223..1228,1235..1237) /gene="meis2" /gene_synonym="hst18361; mrg1" /note="specific DNA...
Synonym: hst18361; mrg1
XM_012967801.3 - Xenopus tropicalis (tropical clawed frog) - NCBI - UCSC - Xenbase
Xenopus tropicalis homeobox C9 (hoxc9), mRNA. (896 bp)
LOCUS NM_001017256 896 bp mRNA linear VRT 22-DEC-2019 DEFINITION Xenopus tropicalis homeobox C9 (hoxc9), mRNA. ACCESSION NM_001017256 VERSION NM_001017256.2 KEYWORDS RefSeq. SOURCE Xenopus tropicalis (tropical clawed frog) ORGANISM Xenopus tropicalis Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Silurana. REFERENCE COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from CR760047.2. On Oct 14, 2005 this sequence version replaced NM...
Synonym: hox3; hox3b; Xhoxc9; XlHbox6
NM_001017256.2 - Xenopus tropicalis (tropical clawed frog) - NCBI - UCSC - Xenbase
Xenopus tropicalis distal-less homeobox 2 (dlx2), mRNA. (2508 bp)
X-dll4; Xdll4" /codon_start=1 /product="homeobox protein DLX-2" /protein_id="NP_001008061.1" /db_xref="GeneID:493423" /db_xref="Xenbase:XB-GENE-852891" /translation="MTGVFDSLVADMHSNHMPSSSYHSLHKSQESPTLPVSTATDSSYYTNHCGAGSPYGQLGSYQFHGAALNGISYSTKSYDLTYSGSYSSYGPYGTSPSPPHNDPEKEDCEPEVRMVNGKPKKVRKPRTIYSSFQLAALQRRFQKTQYLALPERAELAASLGLTQTQVKIWFQNRRSKFKKMWKSGEIPSDQLPVGSESPTCNSPPASTATWDFGPHQRLQGAASGSALQSSNSASSPSPFLGNYSWYQTSNPAPHLQSNPLLQQHHLHHHPPAPVSAGTIF" misc_feature 262..498 /gene="dlx2" /gene_synonym="tes-1; tes1; X-dll2; X-dll4; Xdll4" /note="Homeobox protein distal-less-like N terminal; Region: DLL_N...
Synonym: tes-1; tes1; X-dll2; X-dll4; Xdll4
NM_001008060.1 - Xenopus tropicalis (tropical clawed frog) - NCBI - UCSC - Xenbase
Xenopus tropicalis brain specific homeobox (bsx), mRNA. (2874 bp)
LOCUS NM_001101810 2874 bp mRNA linear VRT 22-DEC-2019 DEFINITION Xenopus tropicalis brain specific homeobox (bsx), mRNA. ACCESSION NM_001101810 VERSION NM_001101810.1 KEYWORDS RefSeq. SOURCE Xenopus tropicalis (tropical clawed frog) ORGANISM Xenopus tropicalis Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Silurana. REFERENCE COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC136001.1. ##Evidence-Data-START## Transcript exon...
Synonym: bsx1; Xbsx
NM_001101810.1 - Xenopus tropicalis (tropical clawed frog) - NCBI - UCSC - Xenbase
Xenopus tropicalis visual system homeobox 1 (vsx1), mRNA. (2295 bp)
LOCUS NM_001100200 2295 bp mRNA linear VRT 22-DEC-2019 DEFINITION Xenopus tropicalis visual system homeobox 1 (vsx1), mRNA. ACCESSION NM_001100200 VERSION NM_001100200.1 KEYWORDS RefSeq. SOURCE Xenopus tropicalis (tropical clawed frog) ORGANISM Xenopus tropicalis Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Silurana. REFERENCE COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC135613.1. ##Evidence-Data-START## Transcript exon...
Synonym: ktcn; ppcd; ppd; rinx; Xvsx1
NM_001100200.1 - Xenopus tropicalis (tropical clawed frog) - NCBI - UCSC - Xenbase
Xenopus tropicalis NK2 homeobox 8 (nkx2-8), mRNA. (1505 bp)
LOCUS NM_203620 1505 bp mRNA linear VRT 22-DEC-2019 DEFINITION Xenopus tropicalis NK2 homeobox 8 (nkx2-8), mRNA. ACCESSION NM_203620 VERSION NM_203620.1 KEYWORDS RefSeq. SOURCE Xenopus tropicalis (tropical clawed frog) ORGANISM Xenopus tropicalis Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Silurana. REFERENCE COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC061321.1. ##Evidence-Data-START## Transcript exon combination ::...
Synonym: nkx2-9; nkx2.8; nkx2h
NM_203620.1 - Xenopus tropicalis (tropical clawed frog) - NCBI - UCSC - Xenbase
PREDICTED: Xenopus tropicalis PBX/knotted 1 homeobox 2 (pknox2), transcript variant X4, mRNA. (3237 bp)
LOCUS XM_031904842 3237 bp mRNA linear VRT 18-DEC-2019 DEFINITION PREDICTED: Xenopus tropicalis PBX/knotted 1 homeobox 2 (pknox2), transcript variant X4, mRNA. ACCESSION XM_031904842 VERSION XM_031904842.1 DBLINK BioProject: PRJNA205740 KEYWORDS RefSeq. SOURCE Xenopus tropicalis...misc_feature 274..531 /gene="pknox2" /gene_synonym="prep2" /note="N-terminal of Homeobox Meis and PKNOX1; Region: Meis_PKNOX_N; pfam16493" /db_xref="CDD:465140" misc_feature order(856..870,874..876,934..936,952..954,991..993, 997..1002,1009..1014,1018..1026) /gene="pknox2" /gene_synonym="prep2" /...
Synonym: prep2
XM_031904842.1 - Xenopus tropicalis (tropical clawed frog) - NCBI - UCSC - Xenbase
Xenopus tropicalis homeobox D8 (hoxd8), mRNA. (1936 bp)
LOCUS NM_001142117 1936 bp mRNA linear VRT 22-DEC-2019 DEFINITION Xenopus tropicalis homeobox D8 (hoxd8), mRNA. ACCESSION NM_001142117 VERSION NM_001142117.1 KEYWORDS RefSeq. SOURCE Xenopus tropicalis (tropical clawed frog) ORGANISM Xenopus tropicalis Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Silurana. REFERENCE COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC168107.1. ##Evidence-Data-START## CDS exon combination ::...
Synonym: hox4; hox4e; hox5.4; hoxd-8
NM_001142117.1 - Xenopus tropicalis (tropical clawed frog) - NCBI - UCSC - Xenbase
Xenopus tropicalis SIX homeobox 2 (six2), mRNA. (1739 bp)
LOCUS NM_001100275 1739 bp mRNA linear VRT 22-DEC-2019 DEFINITION Xenopus tropicalis SIX homeobox 2 (six2), mRNA. ACCESSION NM_001100275 VERSION NM_001100275.1 KEYWORDS RefSeq. SOURCE Xenopus tropicalis (tropical clawed frog) ORGANISM Xenopus tropicalis Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Silurana. REFERENCE COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC135532.1. ##Evidence-Data-START## Transcript exon combination...
NM_001100275.1 - Xenopus tropicalis (tropical clawed frog) - NCBI - UCSC - Xenbase
PREDICTED: Xenopus tropicalis PBX/knotted 1 homeobox 2 (pknox2), transcript variant X3, mRNA. (3362 bp)
LOCUS XM_031904841 3362 bp mRNA linear VRT 18-DEC-2019 DEFINITION PREDICTED: Xenopus tropicalis PBX/knotted 1 homeobox 2 (pknox2), transcript variant X3, mRNA. ACCESSION XM_031904841 VERSION XM_031904841.1 DBLINK BioProject: PRJNA205740 KEYWORDS RefSeq. SOURCE Xenopus tropicalis...misc_feature 399..656 /gene="pknox2" /gene_synonym="prep2" /note="N-terminal of Homeobox Meis and PKNOX1; Region: Meis_PKNOX_N; pfam16493" /db_xref="CDD:465140" misc_feature order(981..995,999..1001,1059..1061,1077..1079,1116..1118, 1122..1127,1134..1139,1143..1151) /gene="pknox2" /gene_synonym="...
Synonym: prep2
XM_031904841.1 - Xenopus tropicalis (tropical clawed frog) - NCBI - UCSC - Xenbase
PREDICTED: Xenopus tropicalis PBX/knotted 1 homeobox 2 (pknox2), transcript variant X2, mRNA. (3413 bp)
LOCUS XM_031904840 3413 bp mRNA linear VRT 18-DEC-2019 DEFINITION PREDICTED: Xenopus tropicalis PBX/knotted 1 homeobox 2 (pknox2), transcript variant X2, mRNA. ACCESSION XM_031904840 VERSION XM_031904840.1 DBLINK BioProject: PRJNA205740 KEYWORDS RefSeq. SOURCE Xenopus tropicalis...misc_feature 450..707 /gene="pknox2" /gene_synonym="prep2" /note="N-terminal of Homeobox Meis and PKNOX1; Region: Meis_PKNOX_N; pfam16493" /db_xref="CDD:465140" misc_feature order(1032..1046,1050..1052,1110..1112,1128..1130, 1167..1169,1173..1178,1185..1190,1194..1202) /gene="pknox2" /gene_synonym="...
Synonym: prep2
XM_031904840.1 - Xenopus tropicalis (tropical clawed frog) - NCBI - UCSC - Xenbase
Xenopus tropicalis Mix paired homeobox (mix1), mRNA. (1605 bp)
LOCUS NM_203517 1605 bp mRNA linear VRT 22-DEC-2019 DEFINITION Xenopus tropicalis Mix paired homeobox (mix1), mRNA. ACCESSION NM_203517 VERSION NM_203517.1 KEYWORDS RefSeq. SOURCE Xenopus tropicalis (tropical clawed frog) ORGANISM Xenopus tropicalis Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Silurana. REFERENCE COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from AY157638.1. ##Evidence-Data-START## Transcript exon combination ::...
Synonym: mild1; mix; mix.1; mix.2; mix2; mixl; mixl1; tMix
NM_203517.1 - Xenopus tropicalis (tropical clawed frog) - NCBI - UCSC - Xenbase
PREDICTED: Xenopus tropicalis Meis homeobox 1 (meis1), transcript variant X2, mRNA. (3614 bp)
"homeobox protein Meis1 isoform X2" /protein_id="XP_004914773.1" /db_xref="GeneID:100488182" /db_xref="Xenbase:XB-GENE-479439" /translation="MAQRYDDLPHYGGMDGVGIPSTMYGDPHAARSMQPVHHLNHGPPLHSHQYPHTAHTNAMPPSMGSSVNDALKRDKDAIYGHPLFPLLALIFEKCELATCTPREPGVAGGDVCSSESFNEDIAVFAKQIRAEKPLFSSNPELDNLMIQAIQVLRFHLLELEKVHELCDNFCHRYISCLKGKMPIDLVIEDREGGSKSDSEDMTRSAPLTDQPSWSRDHDDTASTRSGGTPGPSSGGHTSHSGDNSSEQGDGLDNSVASPSTGDDDDPDKDKKRHKKRGIFPKVATNIMRAWLFQHLTHPYPSEEQKKQLAQDTGLTILQVNNWFINARRRIVQPMIDQSNRAVSQGTPYNADGQPMGGFVMDGQQHMGIRAPGPMSGMGMNMGMEGQWHYM" misc_feature 1145..1399 /gene="meis1" /note="N-terminal of Homeobox...
XM_004914716.4 - Xenopus tropicalis (tropical clawed frog) - NCBI - UCSC - Xenbase

Data Export:

Maximum 10000 results can be retrieved as Tab-delimited text or JSON format.

Debug Info:

Redirect URI : https://172.18.8.233:20082/xt/homeobox
lang : en | div : | spe : xt | query_string : homeobox | format : html | download : 

0.000 | 0.000 | search_start;
0.191 | 0.191 | count_done; http://172.18.8.71:7700/v1/refseq/query?q=((full_search:*:homeobox)%7C(nt:homeobox)%7C(aa:homeobox))?source=Xenopus tropicalis (tropical clawed frog)?to=0&format=json
2.404 | 2.213 | search_done; http://172.18.8.71:7700/v1/refseq/query?q=((full_search:*:homeobox)%7C(nt:homeobox)%7C(aa:homeobox))?source=Xenopus tropicalis (tropical clawed frog)?to=49?from=0?snippet=full_search?drilldown=source?get=accession,version,gi,length,symbol,synonym,geneid,division,source,definition&format=json
2.409 | 0.005 | cgi_end;

GGRNA ver.2 by @meso_cacase at DBCLS
This page is licensed under a Creative Commons Attribution 4.0 International License (CC BY 4.0).

If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596. [Full Text]