LOCUS       XM_031897785            1356 bp    mRNA    linear   VRT 18-DEC-2019
DEFINITION  PREDICTED: Xenopus tropicalis claudin 7 (cldn7), transcript variant
            X1, mRNA.
ACCESSION   XM_031897785
VERSION     XM_031897785.1
DBLINK      BioProject: PRJNA205740
KEYWORDS    RefSeq.
SOURCE      Xenopus tropicalis (tropical clawed frog)
  ORGANISM  Xenopus tropicalis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae;
            Xenopus; Silurana.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_030679.2) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Xenopus tropicalis Annotation
                                           Release 104
            Annotation Version          :: 104
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.3
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1356
                     /organism="Xenopus tropicalis"
                     /mol_type="mRNA"
                     /strain="Nigerian"
                     /db_xref="taxon:8364"
                     /chromosome="3"
                     /sex="female"
                     /tissue_type="liver and blood"
                     /dev_stage="adult"
                     /note="F17 inbred"
     gene            1..1356
                     /gene="cldn7"
                     /note="claudin 7; Derived by automated computational
                     analysis using gene prediction method: Gnomon. Supporting
                     evidence includes similarity to: 1 mRNA, 472 ESTs, 21
                     Proteins, and 100% coverage of the annotated genomic
                     feature by RNAseq alignments, including 123 samples with
                     support for all annotated introns"
                     /db_xref="GeneID:394674"
                     /db_xref="Xenbase:XB-GENE-5786134"
     CDS             213..854
                     /gene="cldn7"
                     /codon_start=1
                     /product="claudin-7 isoform X1"
                     /protein_id="XP_031753645.1"
                     /db_xref="GeneID:394674"
                     /db_xref="Xenbase:XB-GENE-5786134"
                     /translation="

MANSGLQLLGFVLALLGWIALIAATIMPQWKMSSYAGDQIITAVAIYQGLWMSCATQSTGQIQCKVYDSLLQLDASLQATRALMVVSIILGVFGLAISTMGMKCTNCGGDDKVKKSRIAMTGGFVFLIGGLAALIACSWYGNQIIRDFYNPLLPINTKYEFGAGVFLGWAGSFLALIGGALLACSCSRKNNYQKGYPKSGAKTKAPSSARDYV"

     misc_feature    222..758
                     /gene="cldn7"
                     /note="PMP-22/EMP/MP20/Claudin family; Region:
                     PMP22_Claudin; pfam00822"
                     /db_xref="CDD:395662"
ORIGIN      

gcacctggctcaggtatcggtgagagagcggaggaaggagacggatcggattctatcggccggggataaactactcgatcgttcggagccccccccccccccccagcagcagcgaggagtaggggcccctgtgtgtccctgagcttgtacttaccccccctagtgcaggggcaaaggactcctacctacccccacactccaaccccccagggatggccaactccgggctgcagctgctgggcttcgtactggcgctgctgggatggatcgcactaatcgcagcgactattatgccgcagtggaagatgtcctcctatgccggggaccagatcatcacggcggtggcgatttaccaagggctgtggatgtcttgcgccacccagagtacggggcagattcagtgcaaagtctatgactccctactgcagctggacgcatctctgcaggccacgcgggcactcatggtggtctccatcatcctgggggtatttggcctcgccatatctaccatgggcatgaaatgcaccaactgtgggggggatgacaaagtgaagaagtctcgcattgcaatgactggcggatttgtctttctgattgggggtctggcagcgctcattgcctgctcctggtatgggaaccagatcattcgggatttctacaaccctctcctgccaatcaataccaagtacgagtttggtgccggagtcttcctcggctgggccggatccttcctggcgctgattggtggagccctgttggcatgttcatgttcccgcaagaataactaccagaaggggtaccccaagtccggggcaaagaccaaggctccatcttctgcaagggactatgtgtgatgcctcaaaccctgttacccaccttattcaagcagcaccccccaggtcacggctctccacttgcaccccaacattcagcacttagggggaaagaagaactgactaggtagcgagccgccccgtggcggccatgttggacccttcctgtgcttggcggggtgacttggagggatactggggtgctgcttcctactccatttgtgtgactgaccaatgaactgacatttctatgcttgtttaacctgtttataataatgcagctgattggccgtgccggggctcctatgtgatattggggggcggggggggattttattgatgaagtttgtaaagggcattgggggggattttaacactgataccctaatcccagatcagcagtaagtgcaagtgggcctgagcctggggtgtaggggccccccattatgtatctagatttatacgctttgtgacttgtagcagattttcttgtttttgtaaataaaactttttttcaaaggga

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