LOCUS       XM_002938438            2664 bp    mRNA    linear   VRT 18-DEC-2019
DEFINITION  PREDICTED: Xenopus tropicalis claudin 8, gene 3 (cldn8.3), mRNA.
ACCESSION   XM_002938438
VERSION     XM_002938438.5
DBLINK      BioProject: PRJNA205740
KEYWORDS    RefSeq.
SOURCE      Xenopus tropicalis (tropical clawed frog)
  ORGANISM  Xenopus tropicalis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae;
            Xenopus; Silurana.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_030678.2) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Dec 18, 2019 this sequence version replaced XM_002938438.4.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Xenopus tropicalis Annotation
                                           Release 104
            Annotation Version          :: 104
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.3
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2664
                     /organism="Xenopus tropicalis"
                     /mol_type="mRNA"
                     /strain="Nigerian"
                     /db_xref="taxon:8364"
                     /chromosome="2"
                     /sex="female"
                     /tissue_type="liver and blood"
                     /dev_stage="adult"
                     /note="F17 inbred"
     gene            1..2664
                     /gene="cldn8.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Gnomon. Supporting evidence
                     includes similarity to: 6 ESTs, 30 Proteins, and 100%
                     coverage of the annotated genomic feature by RNAseq
                     alignments"
                     /db_xref="GeneID:100485589"
                     /db_xref="Xenbase:XB-GENE-22166264"
     CDS             191..1111
                     /gene="cldn8.3"
                     /codon_start=1
                     /product="claudin-8"
                     /protein_id="XP_002938484.1"
                     /db_xref="GeneID:100485589"
                     /db_xref="Xenbase:XB-GENE-22166264"
                     /translation="

MAMKLAGLVLGGLGFVGTCAVTGMPQWRVTAFIDSNIVVFEAHWEGLWMNCIRQANIRMQCKIYDSLLALPPDLEAGRMLMCVAICLTFLAFMISIFGINCTGFILLIAGIIFILSGIIVLVPVSWVGYRIIQDFYNPLVHPSQKRELGEALYIGWTTALVLIAGGIILCCSFQSSKKEVRYSLPPESVTSVPPPESVTSVPPPESVTSAPPPESVTSVPPPQSVTSVPPPESVTSAPPPESVTSVSPPESVTSVPPPESVTNVPPLESVTSVPPPESVTSVPLQKPSSLYESQDVLKGLLSTDIN"

     misc_feature    254..697
                     /gene="cldn8.3"
                     /note="PMP-22/EMP/MP20/Claudin family; Region:
                     PMP22_Claudin; cl21598"
                     /db_xref="CDD:473919"
     misc_feature    704..>1054
                     /gene="cldn8.3"
                     /note="Atrophin-1 family; Region: Atrophin-1; pfam03154"
                     /db_xref="CDD:460830"
ORIGIN      

gtatctttcagtgatgtgtgatttttggaaagctgtgcacatgaaattccaaccagcccgtgctgggtttcacttggttgcaagtgtttaagaattaagagtcgctttcttcggcagagagtaagagtttcagtttgctgcacacacaggactaatccctgtactgctgagctccatctgggaagacaatatggctatgaaacttgctggtctggtgttgggaggccttggctttgtaggaacttgtgctgtcaccggcatgccccaatggagagtgactgccttcatcgatagcaacattgtggtgtttgaggcacactgggaaggattgtggatgaactgcatcaggcaagccaacatcaggatgcaatgtaagatatatgattcactgttggcactgccacctgacttggaggctggcagaatgttgatgtgtgtggctatctgcttgacattccttgctttcatgatctccatctttggcataaactgcactgggtttatacttctgatagctggcataatattcatcctttctgggataattgttctggttccagtgtcctgggtcggttatcggatcatccaggacttctataatccccttgttcatccatctcagaagagagaactgggcgaagcactgtacattgggtggacaacagcattggttcttattgctggagggataatcctttgctgttccttccagagcagtaaaaaagaagtcagatacagcctgccgcctgaatcagtaaccagtgttccaccacctgaatcagtaaccagtgttccaccgcctgaatcagtaaccagtgctccaccgcctgaatcagtaaccagtgttccgccacctcaatcagtaaccagtgttccaccgcctgaatcagtaaccagtgctccaccgcctgaatcagtaaccagtgtttcaccgcctgaatcagtaaccagtgttccaccgcctgaatcagtaaccaatgttccaccgcttgaatcagtaaccagtgttccaccgcctgaatcagtaaccagcgttccactacagaagccttcaagcctctacgaaagccaagatgtgttaaaaggattacttagtacagatatcaattgaaacctacaaagagatcaactgggatcaaagcaggaattgcaaaggactgactggttgtgactgaaactgaaactctttgcactgcagaatgggagagtaagatagtgagccatttgagattgctgaacattggtcactacagagtgtcttatcaagggattgagataacacaggacttcattttgttcaagatttaaggatagtacttttggggagctgatgcaataattatgagcctatggacatttgtaactaacagaatggttttattgttttttttctgcaccagaatatttcctttcagctgccgtgcaagtaacaccgggtgccagagaaagaaaaagtggcttcagttgtagaactagggggccacaggcccaggggcacctaggccctccctgtctgcctagcaattaatcagcaatcaatgtttcacgagacaagtgcaattaaaaatagtaaaaaccaaaataagctaagtggctataggttggccattgtcatggccagtgagcttacacaatggcagtgggcagagcatctataatggggggggatgtatgcgtgcttaatgcatgttgggagctgtggttgaattgatgacgtctatctgagacagtgagctggagatatggtgattactttttaaaatgatttcatgagtattagtgagagcccaccccttggcattttaatacatttttaagaggcaaaaaagtacagagggataagatctacatttgtattttaaccccaaaacataagaatggatacaaatgaacatgatgaggaacatcaggtctaatcttggagctgccctctgttgacttttccccattttcccatctcagccatagacttgctgcccccaatgtattgcttccccagggcaaaaatcacacctttttattaatgcaatgttaaaaactttgttgcttcggaaagccagaagtgggagtcattttcgatgccttatattttttttataattgtgtataacatagttgtgtataacttattattgggtattagcattacgtcttcaggttccagtacacaattccgcatctcccagcattcatagtaaggcagctcccagcagctttcagctaccataatcatggatagtcattggcaggagatagctctccaatcagtatgttgtcttgctgttgctgaactactcccatcaccaagttaaaggtccctgctatacattgtgaatgctgtacggattcactgaattacactgtagcaaatgctttatattaatggttcaaaaggaaactatccaagacttttaaccacattcctattgaacggggcccttgtgtgttttgaattttctatccatttagttaagctaaatgcagtcagtcttacagtgttttgttttcatgttatttttaatggggagaattttctatgtttcgatgttaatttatttatatgttttacatgataaccacctgatgtaaatgagaaatgatctctgtaaagttatctgtaactgtgttggcactgtataaataaagaatattaaataactgtta

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