LOCUS       NM_204089               2088 bp    mRNA    linear   VRT 04-FEB-2024
DEFINITION  Xenopus tropicalis hematopoietically expressed homeobox (hhex),
            mRNA.
ACCESSION   NM_204089
VERSION     NM_204089.1
KEYWORDS    RefSeq.
SOURCE      Xenopus tropicalis (tropical clawed frog)
  ORGANISM  Xenopus tropicalis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae;
            Xenopus; Silurana.
REFERENCE   1  (bases 1 to 2088)
  AUTHORS   D'Souza,A., Lee,M., Taverner,N., Mason,J., Carruthers,S.,
            Smith,J.C., Amaya,E., Papalopulu,N. and Zorn,A.M.
  TITLE     Molecular components of the endoderm specification pathway in
            Xenopus tropicalis
  JOURNAL   Dev Dyn 226 (1), 118-127 (2003)
   PUBMED   12508233
REFERENCE   2  (bases 1 to 2088)
  AUTHORS   Klein,S.L., Strausberg,R.L., Wagner,L., Pontius,J., Clifton,S.W.
            and Richardson,P.
  TITLE     Genetic and genomic tools for Xenopus research: The NIH Xenopus
            initiative
  JOURNAL   Dev Dyn 225 (4), 384-391 (2002)
   PUBMED   12454917
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from AY160969.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: AY160969.1, CR761571.2 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMD00028290, SAMD00028291
                                           [ECO:0000348]
            ##Evidence-Data-END##
FEATURES             Location/Qualifiers
     source          1..2088
                     /organism="Xenopus tropicalis"
                     /mol_type="mRNA"
                     /db_xref="taxon:8364"
                     /chromosome="7"
                     /map="7"
     gene            1..2088
                     /gene="hhex"
                     /gene_synonym="Hex; Hex1; hmph; hox11l-pen; prh; prhx;
                     tHex; XHex"
                     /note="hematopoietically expressed homeobox"
                     /db_xref="GeneID:395060"
                     /db_xref="Xenbase:XB-GENE-487159"
     exon            1..406
                     /gene="hhex"
                     /gene_synonym="Hex; Hex1; hmph; hox11l-pen; prh; prhx;
                     tHex; XHex"
                     /inference="alignment:Splign:2.1.0"
     CDS             40..864
                     /gene="hhex"
                     /gene_synonym="Hex; Hex1; hmph; hox11l-pen; prh; prhx;
                     tHex; XHex"
                     /note="homeodomain transcription factor; homeobox protein
                     hex"
                     /codon_start=1
                     /product="hematopoietically-expressed homeobox protein
                     hhex"
                     /protein_id="NP_989420.1"
                     /db_xref="GeneID:395060"
                     /db_xref="Xenbase:XB-GENE-487159"
                     /translation="

MQYQHPSSSALGLSVPLYAPTPLQPVHPTPFYIDDILGRSSASNGTPALPTPTLPSPNSSFTSLVATYRTPIYEPTPIHPAFTHPGAALAASYGASTYANPLYPFSRPVSEYTHALIRHDTLGKPLLWSPFIQRPLHKRKGGQVRFSNDQTIELEKKFETQKYLSPPERKRLAKMLQLSERQVKTWFQNRRAKWRRLKQENPQGNKKDETESLENICEESQERCLSAEQKSRESSLDEPTSSPTSQETLDSEVSDDSDQEVDIEGDKGFYNCAH"

     misc_feature    451..627
                     /gene="hhex"
                     /gene_synonym="Hex; Hex1; hmph; hox11l-pen; prh; prhx;
                     tHex; XHex"
                     /note="Region: Homeodomain; pfam00046"
                     /db_xref="CDD:459649"
     misc_feature    628..861
                     /gene="hhex"
                     /gene_synonym="Hex; Hex1; hmph; hox11l-pen; prh; prhx;
                     tHex; XHex"
                     /note="propagated from UniProtKB/Swiss-Prot (Q8AWG6.1);
                     Region: Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite"
     exon            407..585
                     /gene="hhex"
                     /gene_synonym="Hex; Hex1; hmph; hox11l-pen; prh; prhx;
                     tHex; XHex"
                     /inference="alignment:Splign:2.1.0"
     exon            586..636
                     /gene="hhex"
                     /gene_synonym="Hex; Hex1; hmph; hox11l-pen; prh; prhx;
                     tHex; XHex"
                     /inference="alignment:Splign:2.1.0"
     exon            637..2084
                     /gene="hhex"
                     /gene_synonym="Hex; Hex1; hmph; hox11l-pen; prh; prhx;
                     tHex; XHex"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      

attacagcaggatccgagtgtgggagagagagaatagccatgcagtaccagcaccccagctcctcagccctggggctcagtgtccccctgtacgcacccacccctctgcagccagtgcacccaactcccttctacattgatgatatcctgggaaggagcagcgcctctaatgggaccccagccttacccaccccaaccctgccatcgcccaactcttccttcaccagcctggtggctacctacaggactcccatctatgagcctactcccattcaccctgccttcacccaccccggggcagccctggcagcttcctatggagccagcacctatgccaaccctctgtaccccttctccaggccggtcagcgagtacacccatgccctcatccggcacgacaccctgggcaaacccttgctatggagccccttcatccagaggcctcttcacaagcggaaaggcggccaagtgcggttttcaaacgatcagaccatcgaattagagaaaaagtttgagacacaaaaatatttatcgcccccggaaaggaaacgcctggctaaaatgcttcagctcagcgagagacaggtcaaaacctggttccagaacagaagagccaaatggaggcgtctcaagcaggaaaacccacagggaaataagaaagacgaaactgaaagtctagagaatatctgcgaagagagtcaggagaggtgtttgagtgctgagcagaagagcagagagtcctccttggatgaacccacctcatcgcccacctcccaagagactctggattcagaggtgtccgatgattccgaccaggaggtggacattgaaggagacaaaggattttacaactgtgcacattaactgctgctcagtaagaatggacctctcttcagcttgcactttaacagaagctggacctagctccctggtagcctgacttgggttaagccagtggctgtcggactttctcagttcaagcccccactggagttccaacctttgttcagggccccctcagctcataacaaggaaagcagcggtgtaccagtcagagcagaaaatacatttttatcccaaatcttatcctaattaaccttcaagttggaggtatctaggagagcaagtaggcattctcctcaaatttcattctttattgacctttcaggtgtatttaggagagcaaataggcatcctccctaattctcaccctaactggcaagcttctatcccacagtggcacagtttgggaaccactgagttaaggggatggaaaggacattttatcaatgtatatcaaggtttagtttgatcatggtcaaagttctatttcagattgtgtatttatcataaacggtgttactgtaatattttgcctaattgcacaataccactaatattccccaagtgccttttttatacaggtagatcaggaatctcattgtgtaagaaagctcagattttattgacactcaaaaatgaaggaagttttgtgtataaattccagtgcatctcaggttggggtggccaggcctattgtttgagtggcttgggaatttcccctatgtacacaagcaaactgtcaatcatggagggtgcacagccaatgaggtcgcaaacaggcaacccatttcacgcggaccatatggacagcccttttatggggtacaattcatattcccttattgctccattgtctataaatgactttaggcttacataactatattgttgggtctatttggaatggaaaaataaatattaaaagaagcttaatttagcaataattaaaattttacatatttgtacataattctttttgtaaatcccaagtgcattgagaaaattgccaaataatgatttttttttttacaaagggagatctcaaatcaaatgttattatatgatttttttattgtgaatatgtaatatatacattgttctttttgtataatgcgtgtgttgttgttatacctcaggttgtttatatgtcttgtaaatatattttcatcatccaagcaaaaaacatatttaattttgtgtcttaaaaaaacagtggaataaaagaaaaaaatggatacacaaaaa

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