LOCUS       NM_203742               1743 bp    mRNA    linear   VRT 18-DEC-2025
DEFINITION  Xenopus tropicalis S-antigen visual arrestin (sag), mRNA.
ACCESSION   NM_203742
VERSION     NM_203742.1
KEYWORDS    RefSeq.
SOURCE      Xenopus tropicalis (tropical clawed frog)
  ORGANISM  Xenopus tropicalis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae;
            Xenopus; Silurana.
REFERENCE   1  (bases 1 to 1743)
  AUTHORS   Klein,S.L., Strausberg,R.L., Wagner,L., Pontius,J., Clifton,S.W.
            and Richardson,P.
  TITLE     Genetic and genomic tools for Xenopus research: The NIH Xenopus
            initiative
  JOURNAL   Dev Dyn 225 (4), 384-391 (2002)
   PUBMED   12454917
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from BC061277.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC061277.1, CR760827.2 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMD00028309, SAMD00028310
                                           [ECO:0000348]
            ##Evidence-Data-END##
FEATURES             Location/Qualifiers
     source          1..1743
                     /organism="Xenopus tropicalis"
                     /mol_type="mRNA"
                     /db_xref="taxon:8364"
                     /chromosome="5"
                     /map="5"
     gene            1..1743
                     /gene="sag"
                     /note="S-antigen visual arrestin"
                     /db_xref="GeneID:394670"
                     /db_xref="Xenbase:XB-GENE-950817"
     exon            1..108
                     /gene="sag"
                     /inference="alignment:Splign:2.1.0"
     exon            109..201
                     /gene="sag"
                     /inference="alignment:Splign:2.1.0"
     misc_feature    124..126
                     /gene="sag"
                     /note="upstream in-frame stop codon"
     CDS             142..1329
                     /gene="sag"
                     /note="S-antigen; retina and pineal gland (arrestin)"
                     /codon_start=1
                     /product="S-arrestin"
                     /protein_id="NP_989073.1"
                     /db_xref="GeneID:394670"
                     /db_xref="Xenbase:XB-GENE-950817"
                     /translation="

MSGDKKSRHVIYKKTSRDKAVSVYLGKRDYVDHVESVDPVDGVVLVDPDLLKGKKVYVTLTCAFRYGQEDIDVIGLTFRKDLYFARTQIYPPVEDPKALTKVQERLMKKLGNNAYPFLLQFPDYLPCSVSLQPAPTDVGKACGVDFEIKAFATNNLEDRIHKKNSVRLMIRKIQYAPDQPGPKPRAETSWQFFMSDKPLHLTASLPKEVFYHGEPISVSVSVTNNSDKTVKKISASVEQVSNVVLYSSDYYIKTVALEDSQDKVPSKASYNHTFTLLPLLAYNREKREIALDGKLKHEDTNLASSTLLKEGIDRTVMGILVDYKIKVTLTVSGLLGDMTSSEVSTELPFILMHPNPESAKESEQDDDMVFEEFARDQLKDELQAEEKEEEEDDEK"

     misc_feature    202..669
                     /gene="sag"
                     /note="Arrestin (or S-antigen), N-terminal domain; Region:
                     Arrestin_N; cl22903"
                     /db_xref="CDD:451447"
     misc_feature    724..1209
                     /gene="sag"
                     /note="Arrestin (or S-antigen), C-terminal domain; Region:
                     Arrestin_C; smart01017"
                     /db_xref="CDD:214976"
     exon            202..262
                     /gene="sag"
                     /inference="alignment:Splign:2.1.0"
     exon            263..307
                     /gene="sag"
                     /inference="alignment:Splign:2.1.0"
     exon            308..501
                     /gene="sag"
                     /inference="alignment:Splign:2.1.0"
     exon            502..561
                     /gene="sag"
                     /inference="alignment:Splign:2.1.0"
     exon            562..629
                     /gene="sag"
                     /inference="alignment:Splign:2.1.0"
     exon            630..765
                     /gene="sag"
                     /inference="alignment:Splign:2.1.0"
     exon            766..850
                     /gene="sag"
                     /inference="alignment:Splign:2.1.0"
     exon            851..923
                     /gene="sag"
                     /inference="alignment:Splign:2.1.0"
     exon            924..1061
                     /gene="sag"
                     /inference="alignment:Splign:2.1.0"
     exon            1062..1139
                     /gene="sag"
                     /inference="alignment:Splign:2.1.0"
     exon            1140..1163
                     /gene="sag"
                     /inference="alignment:Splign:2.1.0"
     exon            1164..1216
                     /gene="sag"
                     /inference="alignment:Splign:2.1.0"
     exon            1217..1226
                     /gene="sag"
                     /inference="alignment:Splign:2.1.0"
     exon            1227..1715
                     /gene="sag"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      

ggatatctcagtctgtaggagctgcgcagtatcaagcagagcaaaactagacctctcattgcagggttaccttactgcatcccaggaactctgctcttcatttgccaggtgttcagcagtcagtgatctgcgcgtcacattatgagtggtgataagaaatccagacatgtcatctataagaagacctcccgggataaggcggtgagcgtgtacctgggcaaaagggattatgttgatcatgtggaatctgtggacccagtagatggagttgttctagtggatcccgaccttcttaaaggaaaaaaagtgtacgtcacccttacctgtgctttccgttatggccaagaggacattgatgttattggcctaaccttccgtaaagacctttactttgctcggactcaaatttacccaccagtagaggaccccaaggccttgaccaaagttcaggagaggctgatgaagaaattagggaataatgcatacccatttctgctgcagttccctgattatctgccatgctctgtgtctcttcagccagctcccacagatgtgggcaaggcctgcggtgtggattttgaaattaaggcatttgctacaaacaatttagaagacagaattcacaaaaagaactctgttcgacttatgatccgcaaaattcaatatgcgcccgatcagccagggcctaaacccagagcggagacatcttggcagttctttatgtcagacaagcctctgcatctgacggcctctctgcctaaggaggtgttttatcatggggagccaatctctgtgtctgtcagcgtgaccaacaactccgacaaaacagtgaagaaaatatctgcctcagtggaacaagtaagtaatgtggtgctgtattccagtgactactacatcaagacggtggctttggaggattctcaggacaaggtaccttcaaaggcttcctataatcacaccttcaccctactgcccctgctggcatacaatcgggagaagagagaaattgcactagatgggaaactcaaacatgaggacaccaacctggcttccagcactctgcttaaggaaggcattgaccgcactgtcatgggaatcctggtcgactacaagatcaaagtgaccctcactgtttctggactactgggagacatgacctcaagtgaggtttctacggagcttccattcattctcatgcatccaaacccagagagcgccaaggaaagtgagcaggatgatgacatggtgtttgaagaatttgcccgtgatcaactcaaggatgaactgcaagctgaagaaaaggaggaagaggaggatgatgagaaataggatatgcaattccccatctctggctgtgacccagtatctagtaccctgtagcatgttgcatagcacagaccatgcattgatctaggtctcttcatgccctccttcttctatattaccttgacatgagcacaccccccacaatggagaaagctctttatgtagaaatgttagagtcaggattgattgattgaagaaaatggaacaaaacaagtcattgcttatctgattctgacccgatttagattgtaagattctgatcagtatcagcaaggactgtgtgtatttaatgcattcctactgtatgtactagcttacaacaacagcaatcaaagaagttgtaacacctttgatgtaacccaaataaaccaggtggcagtacgattctaaaaaaaaaaaaaaaaaaaaaaaaaaaaa

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