LOCUS       NM_203530               1276 bp    mRNA    linear   VRT 04-FEB-2024
DEFINITION  Xenopus tropicalis VENT homeobox 1, gene 2 (ventx1.2), mRNA.
ACCESSION   NM_203530
VERSION     NM_203530.1
KEYWORDS    RefSeq.
SOURCE      Xenopus tropicalis (tropical clawed frog)
  ORGANISM  Xenopus tropicalis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae;
            Xenopus; Silurana.
REFERENCE   1  (bases 1 to 1276)
  AUTHORS   Klein,S.L., Strausberg,R.L., Wagner,L., Pontius,J., Clifton,S.W.
            and Richardson,P.
  TITLE     Genetic and genomic tools for Xenopus research: The NIH Xenopus
            initiative
  JOURNAL   Dev Dyn 225 (4), 384-391 (2002)
   PUBMED   12454917
REFERENCE   2  (bases 1 to 1276)
  AUTHORS   Polli,M. and Amaya,E.
  TITLE     A study of mesoderm patterning through the analysis of the
            regulation of Xmyf-5 expression
  JOURNAL   Development 129 (12), 2917-2927 (2002)
   PUBMED   12050139
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from AY187017.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: AY187017.1, CR762353.2 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMD00028290, SAMD00028291
                                           [ECO:0000348]
            ##Evidence-Data-END##
FEATURES             Location/Qualifiers
     source          1..1276
                     /organism="Xenopus tropicalis"
                     /mol_type="mRNA"
                     /db_xref="taxon:8364"
                     /chromosome="7"
                     /map="7"
     gene            1..1276
                     /gene="ventx1.2"
                     /gene_synonym="vent1; Xvent-1; Xvent1"
                     /note="VENT homeobox 1, gene 2"
                     /db_xref="GeneID:394455"
                     /db_xref="Xenbase:XB-GENE-920868"
     CDS             65..853
                     /gene="ventx1.2"
                     /gene_synonym="vent1; Xvent-1; Xvent1"
                     /note="vent-1"
                     /codon_start=1
                     /product="homeobox protein vent1"
                     /protein_id="NP_988861.1"
                     /db_xref="GeneID:394455"
                     /db_xref="Xenbase:XB-GENE-920868"
                     /translation="

MVQQGFSIDLILARNREEAPDGKDSVSSRPHIPCAPQPLAPTKYAKEIPRRKDGQEQGEITSFQCSSEEARNRQFSNPSLPALHRSSGSSDEFSPAGSEDDGTESSGRNSQENDTEHRSKSPKSDLQRRLRTAFTPQQITRLEQAFNKQRYLGASERKKLATSLQLSEIQVKTWFQNRRMKLKRQIQDQQPSMVPPPVCYPQTFSYYPGGLPVPLNSGSFYQPPAHPFQAPQHSFIPQPLHHHMRMSAHQEQFPPLFGAQYM"

     misc_feature    110..451
                     /gene="ventx1.2"
                     /gene_synonym="vent1; Xvent-1; Xvent1"
                     /note="propagated from UniProtKB/Swiss-Prot (Q28ET4.1);
                     Region: Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite"
     misc_feature    446..616
                     /gene="ventx1.2"
                     /gene_synonym="vent1; Xvent-1; Xvent1"
                     /note="Region: Homeodomain; pfam00046"
                     /db_xref="CDD:459649"
ORIGIN      

tacctctttttgcaggtttcccatcgattccaattccccgggccagagcaggtttcccttcagcatggttcaacagggattctctattgacctcattctagcaaggaatagagaggaggcaccagatggaaaggactcagtaagctccaggccccacataccttgtgccccacaaccactggccccaaccaagtatgccaaggagataccaaggagaaaggatggacaagaacaaggagaaatcaccagttttcaatgctcttcagaagaggcaagaaacagacaattttctaatccttccttaccagcgttgcacagaagttcggggagctcggatgaattttctccagcaggctcagaagatgatggcactgagagctcaggaagaaattcccaggaaaatgacacagagcacaggtcaaagagccccaaatctgatctccagcgcaggctgagaacggcattcaccccccagcaaataaccagactggaacaggcattcaataagcagagatatctaggggcatctgaaaggaagaagctggcaacgtctctccaactctctgaaatacaggttaaaacctggttccagaatcgaaggatgaaactgaagaggcagatacaagaccagcagcccagcatggttcctccgccagtctgttacccccagaccttctcttattaccctggtggccttcctgtcccattaaacagtggaagcttttatcagcccccggcacatccattccaggcgccacagcattcatttatcccccagccgctccaccaccatatgaggatgagtgctcaccaagaacaattccccccactctttggtgctcagtacatgtaacccctggatataaatcagcattggattttgttgtataaataataacatattgctatattttataaatgtgtaaatagttgctaaatatttattatattattgctcttgtatatatttcagttgtacagtaaattaaacttgctctggcagcaatacttgtaattgtttattgcttttaagcacatatttgtggactgaaagcaaaatgatatgttttatgaaagttcagaaagtagaaatgttttatgttttaaaataatcacaataaatgggttgtatgtatgtatgtatgtataactttatttataaagcgccacaagggtacgcagtgctgtacaatcttacaaaatacaaaattacacacagggaggacaagggatataataaataaatacaataaatatatatatataagtgcaaaaa

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