LOCUS       NM_001101024            1432 bp    mRNA    linear   VRT 29-OCT-2016
DEFINITION  Xenopus tropicalis homeobox B5 (hoxb5), mRNA.
ACCESSION   NM_001101024
VERSION     NM_001101024.1
KEYWORDS    RefSeq.
SOURCE      Xenopus tropicalis (tropical clawed frog)
  ORGANISM  Xenopus tropicalis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae;
            Xenopus; Silurana.
REFERENCE   1  (bases 1 to 1432)
  AUTHORS   Klein SL, Strausberg RL, Wagner L, Pontius J, Clifton SW and
            Richardson P.
  TITLE     Genetic and genomic tools for Xenopus research: The NIH Xenopus
            initiative
  JOURNAL   Dev. Dyn. 225 (4), 384-391 (2002)
   PUBMED   12454917
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from BC135705.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC135705.1, CX342109.2 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN00861989, SAMN00861991
                                           [ECO:0000348]
            ##Evidence-Data-END##
FEATURES             Location/Qualifiers
     source          1..1432
                     /organism="Xenopus tropicalis"
                     /mol_type="mRNA"
                     /db_xref="taxon:8364"
                     /chromosome="10"
                     /map="10"
     gene            1..1432
                     /gene="hoxb5"
                     /gene_synonym="hho.c10; hox2; hox2.1; hox2a; hu-1; Xhox1B;
                     XlHbox4"
                     /note="homeobox B5"
                     /db_xref="GeneID:100113366"
                     /db_xref="Xenbase:XB-GENE-1005991"
     CDS             46..822
                     /gene="hoxb5"
                     /gene_synonym="hho.c10; hox2; hox2.1; hox2a; hu-1; Xhox1B;
                     XlHbox4"
                     /codon_start=1
                     /product="homeobox protein Hox-B5"
                     /protein_id="NP_001094494.1"
                     /db_xref="GeneID:100113366"
                     /db_xref="Xenbase:XB-GENE-1005991"
                     /translation="

MSSYFVNSFSGRYPNGPDYHVLNYGTGSSSNLSGSYREAAGSMQPSAYGYNYNGMDLSVSRAAASSSHYGDSAFPGQESRFRANQSCPLATPDPLPCAKSHKDELSPTDPATSAGSSAQFTEVEETSASSETEESSTPRSSAPPRALQENSSPGAAGTDGQNPQIFPWMRKLHINHDMTGPDGKRARTAYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLSERQIKIWFQNRRMKWKKDNKLKSMSLATGSSAFQP"

     misc_feature    595..765
                     /gene="hoxb5"
                     /gene_synonym="hho.c10; hox2; hox2.1; hox2a; hu-1; Xhox1B;
                     XlHbox4"
                     /note="Region: Homeodomain; pfam00046"
                     /db_xref="CDD:459649"
ORIGIN      

gtgatccacaaatcaaagcctcccccccaaaaaaaaatcacccaaatgagttcctactttgtgaactcgttctcagggcgctatcctaatggccccgactaccatgtgttaaattatgggactggcagcagcagcaatctgagcggatcatacagggaggcagcaggcagcatgcagccctcggcttatggatataactacaatgggatggacctgagtgtgagccgggcagcagcttccagcagccactatggggacagcgccttccccgggcaggagagcaggttcagggcaaatcagagctgccccctggcgacccccgaccccctgccctgtgccaaaagccacaaagacgaactctcccccacggatcctgccacctccgccggctccagcgcccaattcacagaggtagaagaaaccagcgcctcctcggagaccgaggaatccagcaccccccggagcagcgctcccccccgggcactacaggagaacagctcccccggagcggccgggacagacggacagaacccgcagatctttccctggatgagaaaactgcacatcaaccacgacatgacaggtccggatgggaagcgggccaggactgcctacacccggtaccagacgctggagctggagaaagagttccatttcaatcggtacctgacccggaggaggaggatcgagatcgcccatgccttgtgcctgtccgagcggcagattaaaatctggttccagaacaggaggatgaaatggaaaaaggacaacaagctaaaaagcatgagccttgcgacaggcagcagcgctttccagccctgagggcaccgttggccgggactctctgccttgggcacctacagggcacttgtcggcatgtaaagggcacaggactgcacccagtctcccatttctagtcgtctcccaatgctcccagtaacgtcctgattgttttgtgactgtgacacgatgctgcttccggagggagatcgcatgttttcagagctcttaaatgttattataacttatttataataaaaaataaaagaatttcagttttttttttatgtttactgtttttacaatttttcgttgttgttgttttgctgtttcaggccagttaggcggatcgatgcactaaaaggctcgtcttttctattgtaaagtctgtggtattggtcatcattagcccccccagtttaatagtagcccccctgcaaggtggctgatgtccccactagactgtaactcggtgttttgctttttttattttattttatttttttcaagtgaccaatctaaaggagtgagtgactttgtaatgtgtttaaaggtacctgtcctgtctggctgcctgaagattccattctccatttttgtatgagtagtaataataaaatattaagctataaaaaaaaaaaaaaaaaaaaaa

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