LOCUS       NM_001079405            2422 bp    mRNA    linear   VRT 07-JUL-2023
DEFINITION  Xenopus tropicalis uncharacterized protein MGC147490 (MGC147490),
            mRNA.
ACCESSION   NM_001079405
VERSION     NM_001079405.1
KEYWORDS    RefSeq.
SOURCE      Xenopus tropicalis (tropical clawed frog)
  ORGANISM  Xenopus tropicalis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae;
            Xenopus; Silurana.
REFERENCE   1  (bases 1 to 2422)
  AUTHORS   Klein SL, Strausberg RL, Wagner L, Pontius J, Clifton SW and
            Richardson P.
  TITLE     Genetic and genomic tools for Xenopus research: The NIH Xenopus
            initiative
  JOURNAL   Dev Dyn 225 (4), 384-391 (2002)
   PUBMED   12454917
COMMENT     PREDICTED REFSEQ: This record has not been reviewed and the
            function is unknown. The reference sequence was derived from
            BC124017.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC124017.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMD00028290, SAMD00028291
                                           [ECO:0000348]
            ##Evidence-Data-END##
FEATURES             Location/Qualifiers
     source          1..2422
                     /organism="Xenopus tropicalis"
                     /mol_type="mRNA"
                     /db_xref="taxon:8364"
                     /chromosome="9"
                     /map="9"
     gene            1..2422
                     /gene="MGC147490"
                     /note="uncharacterized protein MGC147490"
                     /db_xref="GeneID:780335"
                     /db_xref="Xenbase:XB-GENE-29099171"
     exon            1..989
                     /gene="MGC147490"
                     /inference="alignment:Splign:2.1.0"
     misc_feature    573..575
                     /gene="MGC147490"
                     /note="upstream in-frame stop codon"
     CDS             639..2018
                     /gene="MGC147490"
                     /codon_start=1
                     /product="uncharacterized protein LOC780335"
                     /protein_id="NP_001072873.1"
                     /db_xref="GeneID:780335"
                     /db_xref="Xenbase:XB-GENE-29099171"
                     /translation="

MASSPVPLPLLPSLSCILCHDVPREPVTLSCGHCLCRGCLERAWRGQEAYPTCPKCRPPSVPTPDGVQRGACAEHGEKLHLFSTQDGRLMCPSCRDGTEQHPPHTLVPLQEAVGGYKDELISALAPLEARLKELQQMQCAQEQMIAQHRGNLLSTKHHVNMEFEKLHQYLREREERLLRELQQEGDVILAEMEESLNKIKQNCQGILQTISTTQPRLYEQDSISFLTDIKSCMEICYAGYRDGFPTQNVVAPRDFGFGAVKDLIQYTAWKDMKSYISPALPDIIMDPSTAHLNLILSEDLTSVRYSDTKQNLPENPRRFDYCCCVLGTEGFTSGRHYWAVDVCNKTKWNLGVAKESVNRRGGITLSPENGFWILWLRNGHEFKALDVPYRTLTLRSKPQRLGIFLDYEGGVLSFYNADDMTHIYTFVTSFSETIYPYFCPCLNDSGKNGGPLKVLHHIP"

     misc_feature    684..833
                     /gene="MGC147490"
                     /note="RING finger, HC subclass, found in RING finger
                     protein 169 (RNF169) and similar proteins; Region:
                     RING-HC_RNF169; cd16551"
                     /db_xref="CDD:438213"
     misc_feature    852..965
                     /gene="MGC147490"
                     /note="B-box-type zinc finger superfamily; Region:
                     Bbox_SF; cl00034"
                     /db_xref="CDD:469587"
     misc_feature    1443..2003
                     /gene="MGC147490"
                     /note="SPRY domain; Region: SPRY; cl02614"
                     /db_xref="CDD:470632"
     exon            990..1085
                     /gene="MGC147490"
                     /inference="alignment:Splign:2.1.0"
     exon            1086..1319
                     /gene="MGC147490"
                     /inference="alignment:Splign:2.1.0"
     exon            1320..1342
                     /gene="MGC147490"
                     /inference="alignment:Splign:2.1.0"
     exon            1343..1473
                     /gene="MGC147490"
                     /inference="alignment:Splign:2.1.0"
     exon            1474..2407
                     /gene="MGC147490"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      

atagagacagccaggaagtggcagaaggggcaagagacagccaggggaacaatagagagactgcacagctccaaggcctggcctggatgcctggggtgtaagagacattcagggagtggagaggaaaaagggtgtgggcaggggaagccattcactgaggtcaaagagacagtaagagacagcctgaggtcacatacattacccataggcaggaagagacagcttggggttggtgagaaggatcagtgagcaatcagatttaaagagacagcctagagttagactgagctaaacaagcaaaaaaagagactgccctggagtagaaatattggtctggaagagacagttggcacatttggggtaaataggaaagaaagatcaggtgaaaaagtgaccgccttgtagcgggaatgaacaataggaactaggagacagtttgggggtcagagagaggtttgggcgtcgggcgaggcgggcacagaagtggcacaaacaggtgaggttagtgaggcacagcacagcaggcacagcgccacaggcgtggtttatgggtaagggcccagggctgtgactgaggcaagcgagagtgtagttggcatctgattggcactaacaggcgagacagacaggtgcccgccatggcctctagcccagtcccactgcccctgctgccctctctcagctgcattctgtgccacgatgtgccccgggagccggtcaccctaagctgcggccactgcctgtgccggggatgcttggagcgggcatggagggggcaagaggcctaccctacctgccccaagtgccggcccccttctgtgcccacccccgacggagtgcagcggggcgcctgtgcggaacacggggagaagctgcatttattctccacccaggatgggaggctgatgtgcccctcctgcagggatggcaccgaacagcacccccctcatacgctcgtgcccctacaggaggcagtggggggctacaaggatgaactcatctcagcactcgccccgctggaggcccggctcaaggaactgcagcaaatgcaatgtgcccaggagcagatgattgcccagcaccgggggaacctgctcagcaccaagcaccatgtcaatatggagtttgagaagctgcaccagtacctgcgggagagggaggagaggctcctgcgggagctgcaacaggagggagatgtcatcctggccgagatggaggagagtctcaacaagatcaagcagaactgtcaggggatcctacagaccatcagcaccacccaacccagactgtacgagcaggactccatctccttccttactgacataaagtcgtgcatggagatatgctacgcgggttacagagacggcttcccgacccagaatgtggtggcgccgagggactttggctttggagcagtgaaggatctgattcagtacacagcctggaaagatatgaaatcctacatcagcccagccctgcccgatataatcatggaccccagcacggcgcatctcaacctgatcctctccgaagacctgaccagtgtccgatacagcgacaccaagcagaatctgcccgaaaacccccggcgcttcgattactgttgctgcgtgctgggtacggagggcttcacgtccggaaggcactactgggccgtggacgtctgcaacaaaacaaagtggaacctgggggtggctaaggaatcggtgaacaggcgcggtgggatcaccctatcccccgagaatgggttttggatactctggcttcgaaatggccacgagttcaaggcattggatgtcccgtaccggactctcaccttgcgaagcaaaccgcaacggttgggcatcttcctagactacgaagggggtgtcctgtccttctacaacgccgacgacatgacccacatctacaccttcgtcacttccttctccgagaccatctacccttatttctgtccctgcctcaacgactcggggaagaacggcggccccctgaaagtcctccaccatataccgtgagaagcggttggcgtggcgcgaatgtcgaagaagggctccgacagaaggaatcattccagccaaaataccttttaccactattgtgtgtcctatttctgtaatctagatgatgatccctagcgagccaaggggcgggactgggacttaatgctttagtcgtactccttttactaaaagtattcattgtgatgaaggaaaccggtccaagtgtgggtttcattactgcccccccccccatctacgtcattcatagggtctgtttcgctttagtaacttcagctcttatcagtttgcatctccccccgatactaagctgcaaaacggaaatttaatgtatttcatgttatcatccaagtacgaccttcaataaactcgcaactggaaccaaaaaaaaaaaaaaaaaa

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