LOCUS       NM_001045601            2841 bp    mRNA    linear   VRT 30-OCT-2024
DEFINITION  Xenopus tropicalis uncharacterized XB5759442 (XB5759442), mRNA.
ACCESSION   NM_001045601
VERSION     NM_001045601.2
KEYWORDS    RefSeq.
SOURCE      Xenopus tropicalis (tropical clawed frog)
  ORGANISM  Xenopus tropicalis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae;
            Xenopus; Silurana.
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AAMC04000001.1.
            
            On Oct 30, 2024 this sequence version replaced NM_001045601.1.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-2841              AAMC04000001.1     214104269-214107109
FEATURES             Location/Qualifiers
     source          1..2841
                     /organism="Xenopus tropicalis"
                     /mol_type="mRNA"
                     /db_xref="taxon:8364"
                     /chromosome="1"
                     /map="1"
     gene            1..2841
                     /gene="XB5759442"
                     /note="uncharacterized XB5759442"
                     /db_xref="GeneID:733855"
                     /db_xref="Xenbase:XB-GENE-5759443"
     exon            1..2841
                     /gene="XB5759442"
                     /inference="alignment:Splign:2.1.0"
     CDS             13..1644
                     /gene="XB5759442"
                     /codon_start=1
                     /product="novel C3HC4 type (RING finger) and B-box zinc
                     finger protein with SPRY domain"
                     /protein_id="NP_001039066.1"
                     /db_xref="GeneID:733855"
                     /db_xref="Xenbase:XB-GENE-5759443"
                     /translation="

MAAADLRDELSCSICTSIYTDPVSLPCGHNFCRGCIGGVLGTQEGSGAYSCPECRAEYQECPALPRNRALGNIAERFRPTETEPGETGIFCTYCLLSPVPAAKSCLLCEASLCDTHLRGHCQSAEHVLTEPTASFMGRKCSVHNELLKYFCCEDSACICVSCCLAGEHRGHRVELLSEASEKKKEKLRKVLEKLSPEREETERGAQRLQERRREVAEVAAGETERVTALFRGIREELEALEKRLLSDISRQKEELSLTLTELIQQLEIKKDELSRKIHHIEELCNMADPLTVLQEQWESHGAAFCGAEGADTEGREREDTEGGDRKRRKINHIKVPAVGDLDVGRISETLLTGLAGIVTGVEGRIYGQGDTELVLDRNTAGNHVSVSGDGKSASYSHTDQRRPQTPERFQYYPQTLSTRSFPSGRHYWEVEVSESGGWGVGAAYPSIERGGGQSLIGNNNKSWCLYKWNNNYTVTHDRKVTRLPHVPSCRRIRISLDYEAGRLSFYELSEPIRHLHTFTASFTEPLHAAFCVVGGGACVRIIS"

     misc_feature    25..240
                     /gene="XB5759442"
                     /note="RING finger, HC subclass, found in tripartite
                     motif-containing protein TRIM25 and similar proteins;
                     Region: RING-HC_TRIM25_C-IV; cd16597"
                     /db_xref="CDD:438259"
     misc_feature    order(34..39,49..51,58..60,97..99,166..177)
                     /gene="XB5759442"
                     /note="ubiquitin binding site [polypeptide binding]; other
                     site"
                     /db_xref="CDD:438259"
     misc_feature    order(34..36,49..66,103..105,115..117,124..129,136..138,
                     160..162,166..171,175..177)
                     /gene="XB5759442"
                     /note="E2 binding site [polypeptide binding]; other site"
                     /db_xref="CDD:438259"
     misc_feature    283..405
                     /gene="XB5759442"
                     /note="B-box-type zinc finger superfamily; Region:
                     Bbox_SF; cl00034"
                     /db_xref="CDD:469587"
     misc_feature    424..564
                     /gene="XB5759442"
                     /note="B-box-type 2 zinc finger found in tripartite
                     motif-containing proteins, TRIM16, TRIM29, TRIM47 and
                     similar proteins; Region: Bbox2_TRIM16-like; cd19769"
                     /db_xref="CDD:380827"
     misc_feature    559..942
                     /gene="XB5759442"
                     /note="B-Box C-terminal domain; Region: BBC; smart00502"
                     /db_xref="CDD:128778"
     misc_feature    1129..1638
                     /gene="XB5759442"
                     /note="PRY/SPRY domain in tripartite motif-containing
                     (TRIM) proteins, including TRIM14-like, TRIM16-like,
                     TRIM25-like, TRIM47-like, TRIM65 and RNF135, and
                     stonustoxin; Region: SPRY_PRY_C-I_2; cd12891"
                     /db_xref="CDD:293949"
ORIGIN      

ctgatttcagcgatggcggctgctgatctgagagacgagctgagctgctccatctgtaccagcatttatactgatccggtatccctgccctgtggccataacttctgccggggctgcattgggggggtgctgggtacccaggaggggtctggggcttattcctgccctgaatgcagagctgagtatcaggagtgccctgccctgcccaggaacagagctctggggaacatagcagagaggttccgtccgactgagacagagccgggggagactgggatcttctgcacttactgtctcctctctcctgtacctgctgctaaatcctgtctcctgtgtgaggcttctctgtgtgatacccacctgagggggcactgccagtcagcagaacatgtactcactgagcccaccgcttcctttatggggagaaaatgttctgtacacaatgagctcctaaagtatttctgctgtgaggactctgcctgtatctgtgtgtcctgctgcctggccggggagcaccggggccacagggtggagctgctgagtgaggcctctgagaagaagaaagagaaactgaggaaagttctggagaaactgagcccagagagagaggagactgagagaggagcccagaggctgcaggagcgcaggagagaagtggcagaagtggcagccggtgagacagagagagtcactgccctgtttaggggcatcagggaagagctggaagccctagagaagcgactcctgagtgacatctccaggcagaaagaggagctctcactcacactcactgagctgatccaacagctggaaataaagaaggacgagctgtccaggaagatccatcacattgaggagctgtgcaacatggcagatccactcactgtcctacaggaacaatgggaatcccatggggctgcattttgtggggctgagggggcagatactgagggcagagagagagaggatactgaggggggagacaggaagcgcagaaaaataaatcacataaaggtcccggctgtaggggatctggatgtgggtcggatctcagagacattactcacaggcttagctgggattgtgactggggtagagggaaggatctatgggcagggggatacagagctggtactggatagaaacacggctgggaatcatgtatctgtatcaggggacgggaaatctgcttcctactcacatacagaccagcgtcgcccacaaaccccagagagatttcagtattatcctcagactttaagcaccaggagtttcccctcagggcgacattactgggaagtggaggtcagtgaatcagggggctggggggtaggggcggcctatcccagtatagagaggggagggggtcagtctctcattgggaataataacaagtcctggtgtttgtacaaatggaataataactatacagtgacacatgacaggaaagtcacacggttaccccacgtcccttcctgcaggagaatcaggatctcattggactatgaggccggacgcctgtccttttatgagctgagtgagccaatcaggcacttacacaccttcactgcctccttcactgagccccttcatgctgcattctgtgtagtggggggaggtgcctgtgtgagaatcattagttagggccccgcccactgcccagcaggaaccccattcccagagctgcccttagccctgtgatgccaggaaaggaaggacattggccattgtatttatggaacggaaattccatccagctaaatttttggaaaatacataaatcgacatacccgacactgcctgcatatcccactcagcactattcctgagacacttacagtatatggagcacatgtgggtcacagtttgacctaatgaaataggaaacactatggacacttatttttaggactgattctggggttggtatatggacattcccaattgactttgtgttgtatatatcaccatgtggatacttgtctcatcatgagaatatatgtggttattacatcacgtaggaaggggtgtgtcttatggcccctcccctcatttatcctttttataccactctctgtgtaacactaggcttgataaagggcccaggtagggccgaaacgttgccctttatacctgtgtatgggctaaataaacatccctttgtcactttgctacttgttggtttgctactgaattttctactatattactgaccgctctgcaggagagggatctactggatcaacacccaacacttccacaggcgcattacactgagagggttacgctctcccccatatgataataatcctcagacacataatattttatacaaaaatacagaatatttattgctgtgtccaatgaacaaggcgcaaccaaaaaaccaatttacattctacattaaacacaattaatctgtttgcaatacaattactgtttgttctcttgtgtagactttgtcatttaaccaacattttctatattaaatgcctgtaagattgctaataaacacaatacaggttttgccccacacgctccctacaacaataactgtagataaatacagaaccaatgtgccccgtccccctgcaatcacaatgccgctgggattcttgggaaaatgctgcgctgggggggaaatggcaatagcactcggaattgcactttgctcattgcattcgctgatgtaaatgagccccaatgtctctttcctgctgcaaaattaaactgctctttggcatctgttttattgttcatatgggggggggcatttatttacatgttatatacctttatattcaactataataaataataaaagaatgattttttgttcta

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