2025-04-15 16:33:29, GGRNA.v2 : RefSeq release 229 (Mar, 2025)
LOCUS NM_001011281 1822 bp mRNA linear VRT 22-DEC-2019 DEFINITION Xenopus tropicalis protein disulfide isomerase family A member 2 (pdia2), mRNA. ACCESSION NM_001011281 VERSION NM_001011281.1 KEYWORDS RefSeq. SOURCE Xenopus tropicalis (tropical clawed frog) ORGANISM Xenopus tropicalis Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Silurana. REFERENCE 1 (bases 1 to 1822) AUTHORS Klein SL, Strausberg RL, Wagner L, Pontius J, Clifton SW and Richardson P. TITLE Genetic and genomic tools for Xenopus research: The NIH Xenopus initiative JOURNAL Dev. Dyn. 225 (4), 384-391 (2002) PUBMED 12454917 COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC087995.1. ##Evidence-Data-START## Transcript exon combination :: BC087995.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMD00028309, SAMD00028310 [ECO:0000348] ##Evidence-Data-END## FEATURES Location/Qualifiers source 1..1822 /organism="Xenopus tropicalis" /mol_type="mRNA" /db_xref="taxon:8364" /chromosome="9" /map="9" gene 1..1822 /gene="pdia2" /gene_synonym="pdi; pdip; XPDIp" /note="protein disulfide isomerase family A member 2" /db_xref="GeneID:496734" /db_xref="Xenbase:XB-GENE-5770794" CDS 43..1623 /gene="pdia2" /gene_synonym="pdi; pdip; XPDIp" /EC_number="5.3.4.1" /codon_start=1 /product="protein disulfide-isomerase A2 precursor" /protein_id="NP_001011281.1" /db_xref="GeneID:496734" /db_xref="Xenbase:XB-GENE-5770794" /translation="
MRWLTALQLCLLCTFYTVALGQNATSEEPTKNSSEEETSDELLEEDNVLVLNKKNFDKALETYKYLLVEFYAPWCGHCQELAPKYAKAAEILKDKSEEVRLAKVDATVESELSMEFNVNGYPTLKFFKGGNRTGHIDYGGKRDQDGLVKWMLRRLGPAAIVLDKVESAEKFTSSQESPVIGFFKNPEDADIKIFYEAAELNEDFTFALAHDAKLFEKFGVTEDTVIFFKNSEEKPEFKVDEDLGLDKDELSKFLKINNIDLVTEYSAETSDKIFAAQIPNHLLLFINKTEDSQLALLEHFRKAATHFKGKILFVFIDSDGGFSSVLEYFGLKSSDVPTLRFINLESVKKYAFDAPEITEDTIQTFCRTVLEGNVKQNLMSEEIPADWDKNPVKVLVGKNFEEVAYDESKSVFVEFYAPWCSHCKELEPVWEELGEKYKDHESVIIAKMDATANEIDGLRVRGFPNLRFFPAGPGRKMIEYTKERTVELFSAFIDSGGVLPEEQVEKDAEAEESKEVAEEDKGKDEL"
sig_peptide 43..105 /gene="pdia2" /gene_synonym="pdi; pdip; XPDIp" /inference="COORDINATES: ab initio prediction:SignalP:4.0" misc_feature 178..1548 /gene="pdia2" /gene_synonym="pdi; pdip; XPDIp" /note="protein disulfide isomerase, eukaryotic; Region: ER_PDI_fam; TIGR01130" /db_xref="CDD:273457" ORIGIN
gatttgttttggcttgccagtcaagcaccaggtatatccgccatgaggtggctcactgcgctccagctctgccttctgtgcacgttttataccgtggcgcttggccaaaatgcgacttctgaggaacccacgaagaactcaagcgaggaggagacatcagacgagcttctggaagaggacaacgtcttggttctaaacaagaagaactttgacaaggcccttgagacctataaatatctcctagtggagttctatgctccttggtgcggtcattgccaagagcttgctccaaaatacgccaaggcggcggagatcctgaaggacaagtcagaagaagtgaggctggctaaagtagatgccaccgtagaatctgaactgagcatggagtttaatgtgaatgggtatcccaccctgaaattctttaaaggtggaaacagaacgggccacatcgattatggaggaaagagggaccaagatggcttggtgaagtggatgctgagacgtttggggccggcagccattgtgcttgataaagtagaaagtgctgagaaattcaccagctcccaagaatctccagtgattggtttcttcaagaacccggaagatgccgatatcaaaatattttatgaagctgcggagcttaatgaagacttcacttttgccctggcccacgatgcaaaactgtttgagaaattcggagtgacggaagacacggtcatcttcttcaaaaactctgaggagaagcctgagtttaaagttgatgaagaccttggattagacaaagatgagctttccaagttcctcaagataaacaacatcgacctcgtcacagaatacagcgctgagacttccgataagatttttgctgcccagatccccaaccacttgctgctttttatcaataagactgaggattcccaactggcgctgttggaacatttccgcaaagcggcgacccactttaaagggaaaatcctcttcgtttttatcgactccgacggcggtttttcttcggtccttgagtatttcgggctgaaatcatcggacgttccaaccctccgatttataaacctggagtcggtgaagaagtacgcgttcgatgccccggaaatcacggaagacactatccaaacattctgcaggactgtccttgagggaaacgtcaagcaaaacctcatgagtgaggaaatcccggccgattgggataagaatccagtgaaggttctggtggggaagaactttgaagaggtggcgtatgatgaaagcaagagtgtgtttgtagaattctatgccccttggtgctctcactgcaaagagctggaaccagtctgggaagaactaggggaaaagtacaaggaccacgagagcgttatcatcgccaaaatggacgccaccgccaacgagatcgatgggctccgagtacgaggattccccaacctgaggtttttccctgcgggccccgggcgcaagatgattgaatatacaaaggaaaggaccgttgagctgttttcggccttcattgacagtgggggggtgctgcccgaggagcaagtggaaaaggatgctgaagcagaggagagcaaggaagtggcggaggaagacaaaggaaaggatgagttgtaaccctgtgctatgggataaagtgccccgctgggagccaatggcttgtgtaaatgaccagtcagtcgggggccccccggcccttgccccgcccaatgctcaggcacaactaggatttgtattcttcatttgttgctgttaccaaaacatttttgacattaaaggacacttttatttaaaaaaaaaaaaaaaaaaaaaaaaa
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@meso_cacase at
DBCLS
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Creative Commons Attribution 4.0 International License (CC BY 4.0).
If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596.
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