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2024-04-24 01:36:33, GGRNA : RefSeq release 60 (20130726)
LOCUS XM_001718943 903 bp mRNA linear PRI 30-OCT-2012 DEFINITION PREDICTED: Homo sapiens double homeobox protein 4-like (LOC100134409), mRNA. ACCESSION XM_001718943 VERSION XM_001718943.2 GI:239758000 KEYWORDS RefSeq. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_001839649) annotated using gene prediction method: GNOMON. Also see: Documentation of NCBI's Annotation Process On Jun 10, 2009 this sequence version replaced gi:169217789. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Homo sapiens Annotation Release 104 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..903 /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /chromosome="Unknown" /sex="male" /dev_stage="adult" gene 1..903 /gene="LOC100134409" /note="Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 Proteins" /db_xref="GeneID:100134409" CDS 1..903 /gene="LOC100134409" /codon_start=1 /product="double homeobox protein 4-like" /protein_id="XP_001718995.2" /db_xref="GI:239758001" /db_xref="GeneID:100134409" /translation="
MQRRVEDRYGAFALLAIFQTGHTADSPCCRTRESIVRPSCRGGIFSLGSRSGLLRGIEREPHACVLHRQAEVHGGPRSSLCPCPSMKFQPGLPAMALPTPLDGTHTAEAQGRGRRRRIVWTPSQREALRACFERNPYLGITTREQLAQAIGILEPRVQIWFQNERSSQLRQHRQKSRPWPGRHGPPEGRRKQTTVTGSQTALFLRAFEKDRFPGIAAKEELARETVLPESRIQIWFQNRRARHPGQAGRAPAKAGGLCNAATGGCHPDTSWVAFAHIGAWGTHCGGKNGSSPLCGVSHQA
"
misc_feature 340..516
/gene="LOC100134409"
/note="Homeodomain; DNA binding domains involved in the
transcriptional regulation of key eukaryotic developmental
processes; may bind to DNA as monomers or as homo- and/or
heterodimers, in a sequence-specific manner; Region:
homeodomain; cd00086"
/db_xref="CDD:28970"
misc_feature order(340..354,358..360,409..411,427..429,466..468,
472..477,484..489,493..501,505..510)
/gene="LOC100134409"
/note="DNA binding site [nucleotide binding]"
/db_xref="CDD:28970"
misc_feature order(346..348,355..357,475..477,484..489,496..498)
/gene="LOC100134409"
/note="specific DNA base contacts [nucleotide binding];
other site"
/db_xref="CDD:28970"
misc_feature 565..729
/gene="LOC100134409"
/note="Homeodomain; DNA binding domains involved in the
transcriptional regulation of key eukaryotic developmental
processes; may bind to DNA as monomers or as homo- and/or
heterodimers, in a sequence-specific manner; Region:
homeodomain; cd00086"
/db_xref="CDD:28970"
misc_feature order(565..579,583..585,634..636,652..654,691..693,
697..702,709..714,718..726)
/gene="LOC100134409"
/note="DNA binding site [nucleotide binding]"
/db_xref="CDD:28970"
misc_feature order(571..573,580..582,700..702,709..714,721..723)
/gene="LOC100134409"
/note="specific DNA base contacts [nucleotide binding];
other site"
/db_xref="CDD:28970"
variation 82
/gene="LOC100134409"
/replace="a"
/replace="t"
/db_xref="dbSNP:78325148"
variation complement(89)
/gene="LOC100134409"
/replace="a"
/replace="g"
/db_xref="dbSNP:36160037"
variation complement(101)
/gene="LOC100134409"
/replace="c"
/replace="g"
/db_xref="dbSNP:2678723"
variation 105
/gene="LOC100134409"
/replace="c"
/replace="t"
/db_xref="dbSNP:144578648"
variation 106
/gene="LOC100134409"
/replace="a"
/replace="g"
/db_xref="dbSNP:139305546"
variation 109
/gene="LOC100134409"
/replace="a"
/replace="t"
/db_xref="dbSNP:77225540"
variation 115
/gene="LOC100134409"
/replace="a"
/replace="t"
/db_xref="dbSNP:76006992"
variation 117
/gene="LOC100134409"
/replace="a"
/replace="c"
/db_xref="dbSNP:74991520"
variation 118
/gene="LOC100134409"
/replace="c"
/replace="g"
/db_xref="dbSNP:75806238"
variation 121
/gene="LOC100134409"
/replace="a"
/replace="c"
/replace="t"
/db_xref="dbSNP:79395893"
variation 123
/gene="LOC100134409"
/replace="c"
/replace="g"
/db_xref="dbSNP:75286910"
variation 124
/gene="LOC100134409"
/replace="a"
/replace="g"
/db_xref="dbSNP:79738702"
variation 129
/gene="LOC100134409"
/replace="c"
/replace="t"
/db_xref="dbSNP:36179900"
variation 129
/gene="LOC100134409"
/replace="c"
/replace="t"
/db_xref="dbSNP:78721907"
variation 131
/gene="LOC100134409"
/replace="a"
/replace="t"
/db_xref="dbSNP:75450674"
variation 134
/gene="LOC100134409"
/replace="c"
/replace="t"
/db_xref="dbSNP:77061284"
variation 140
/gene="LOC100134409"
/replace="c"
/replace="t"
/db_xref="dbSNP:80166828"
variation 143
/gene="LOC100134409"
/replace="a"
/replace="g"
/db_xref="dbSNP:78629700"
variation 144
/gene="LOC100134409"
/replace="a"
/replace="g"
/db_xref="dbSNP:78094372"
variation 149
/gene="LOC100134409"
/replace="a"
/replace="c"
/replace="g"
/db_xref="dbSNP:79453395"
variation 149
/gene="LOC100134409"
/replace="g"
/replace="t"
/db_xref="dbSNP:36175697"
variation 150
/gene="LOC100134409"
/replace="c"
/replace="g"
/db_xref="dbSNP:76850523"
variation 150
/gene="LOC100134409"
/replace="c"
/replace="t"
/db_xref="dbSNP:74761939"
variation complement(155)
/gene="LOC100134409"
/replace="a"
/replace="g"
/db_xref="dbSNP:36174156"
variation complement(159..161)
/gene="LOC100134409"
/replace=""
/replace="cct"
/db_xref="dbSNP:36168286"
variation 159
/gene="LOC100134409"
/replace="c"
/replace="t"
/db_xref="dbSNP:76951058"
variation 163
/gene="LOC100134409"
/replace="c"
/replace="g"
/replace="t"
/db_xref="dbSNP:74959726"
variation 163
/gene="LOC100134409"
/replace="c"
/replace="t"
/db_xref="dbSNP:74726821"
variation 164
/gene="LOC100134409"
/replace="a"
/replace="g"
/db_xref="dbSNP:78131996"
variation 166
/gene="LOC100134409"
/replace="a"
/replace="g"
/db_xref="dbSNP:79826347"
variation 166
/gene="LOC100134409"
/replace="a"
/replace="g"
/db_xref="dbSNP:75680750"
variation 167
/gene="LOC100134409"
/replace="c"
/replace="g"
/db_xref="dbSNP:36182839"
variation 175
/gene="LOC100134409"
/replace="c"
/replace="t"
/db_xref="dbSNP:76336091"
variation complement(175)
/gene="LOC100134409"
/replace="c"
/replace="t"
/db_xref="dbSNP:36186547"
variation complement(175)
/gene="LOC100134409"
/replace="c"
/replace="t"
/db_xref="dbSNP:36154470"
variation 176
/gene="LOC100134409"
/replace="a"
/replace="g"
/db_xref="dbSNP:78826644"
variation 178
/gene="LOC100134409"
/replace="a"
/replace="c"
/replace="g"
/db_xref="dbSNP:78982182"
variation 179
/gene="LOC100134409"
/replace="a"
/replace="g"
/db_xref="dbSNP:112433047"
variation complement(180)
/gene="LOC100134409"
/replace="a"
/replace="c"
/db_xref="dbSNP:36143571"
variation complement(180)
/gene="LOC100134409"
/replace="a"
/replace="g"
/db_xref="dbSNP:74194039"
variation 181
/gene="LOC100134409"
/replace="a"
/replace="c"
/db_xref="dbSNP:77495775"
variation 182..183
/gene="LOC100134409"
/replace=""
/replace="a"
/db_xref="dbSNP:36187771"
variation complement(185)
/gene="LOC100134409"
/replace="a"
/replace="g"
/db_xref="dbSNP:36184253"
variation 186
/gene="LOC100134409"
/replace="a"
/replace="c"
/db_xref="dbSNP:74848691"
variation 186
/gene="LOC100134409"
/replace="c"
/replace="g"
/replace="t"
/db_xref="dbSNP:77056457"
variation 187
/gene="LOC100134409"
/replace="a"
/replace="g"
/db_xref="dbSNP:77871182"
variation complement(187)
/gene="LOC100134409"
/replace="a"
/replace="g"
/db_xref="dbSNP:36177642"
variation 187
/gene="LOC100134409"
/replace="a"
/replace="g"
/db_xref="dbSNP:7394126"
variation 187
/gene="LOC100134409"
/replace="a"
/replace="g"
/db_xref="dbSNP:76741916"
variation 192
/gene="LOC100134409"
/replace="a"
/replace="c"
/db_xref="dbSNP:36178461"
variation complement(192)
/gene="LOC100134409"
/replace="c"
/replace="t"
/db_xref="dbSNP:36138655"
variation 193
/gene="LOC100134409"
/replace="a"
/replace="c"
/replace="g"
/db_xref="dbSNP:111891479"
variation 193
/gene="LOC100134409"
/replace="a"
/replace="g"
/db_xref="dbSNP:78504254"
variation 193
/gene="LOC100134409"
/replace="a"
/replace="g"
/db_xref="dbSNP:76959437"
variation 194
/gene="LOC100134409"
/replace="c"
/replace="t"
/db_xref="dbSNP:76204066"
variation 196
/gene="LOC100134409"
/replace="a"
/replace="t"
/db_xref="dbSNP:77485782"
variation complement(270)
/gene="LOC100134409"
/replace="a"
/replace="g"
/db_xref="dbSNP:36138528"
variation 380
/gene="LOC100134409"
/replace="c"
/replace="t"
/db_xref="dbSNP:36161375"
variation complement(413)
/gene="LOC100134409"
/replace="c"
/replace="t"
/db_xref="dbSNP:36132140"
variation 413
/gene="LOC100134409"
/replace="c"
/replace="t"
/db_xref="dbSNP:78691315"
variation 413
/gene="LOC100134409"
/replace="c"
/replace="t"
/db_xref="dbSNP:36130764"
variation 429
/gene="LOC100134409"
/replace="a"
/replace="g"
/db_xref="dbSNP:79246118"
variation 430
/gene="LOC100134409"
/replace="a"
/replace="g"
/db_xref="dbSNP:75101049"
variation 555
/gene="LOC100134409"
/replace="a"
/replace="g"
/db_xref="dbSNP:67157308"
variation 722
/gene="LOC100134409"
/replace="c"
/replace="t"
/db_xref="dbSNP:36158165"
variation 744
/gene="LOC100134409"
/replace="c"
/replace="t"
/db_xref="dbSNP:36164812"
variation 772
/gene="LOC100134409"
/replace="g"
/replace="t"
/db_xref="dbSNP:36137911"
ORIGIN
atgcagagaagggtggaagaccggtatggtgcctttgctctccttgccattttccaaaccggccacactgcagactccccatgttgccgcacacgggaatccatcgtcaggccatcatgccggggaggcatcttctctctggggtctcgctctggtctcctacgtggaattgaacgagagccacacgcctgcgtgttgcacaggcaggctgaggtgcacggaggcccgcggtcctctctctgcccatgtccgtccatgaaattccagccagggctccccgcgatggccttgccgacacctttggatggcacccataccgcggaagcccagggacggggacggcgaaggagaatcgtttggaccccgagccaaagagaggccctgcgagcctgctttgagcggaacccatacctgggcatcaccaccagagaacagctggcccaggccatcggcattctggagcccagggtccagatttggtttcagaatgagaggtcaagccagctgaggcagcaccggcagaaatctcggccctggcccgggagacacggcccgccagaaggtaggcgaaagcagaccaccgtcaccggatcccagaccgccctgttcctcagagcctttgagaaggatcgctttccaggcatcgctgccaaggaagagctggccagagagacggtcctcccggagtccaggattcagatctggtttcagaatcgaagggccaggcacccgggacaggctggcagggcacccgcgaaggcaggcggcctgtgcaatgcagccaccggcgggtgtcaccctgatacctcttgggtggccttcgcccacatcggcgcgtggggaacgcattgtgggggaaagaatggcagttctccgctgtgtggagtctctcaccaggcctag
//
by
@meso_cacase at
DBCLS
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