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2024-04-19 06:41:49, GGRNA : RefSeq release 60 (20130726)
LOCUS NR_003225 1973 bp RNA linear PRI 16-JUL-2013
DEFINITION Homo sapiens lectin, galactoside-binding, soluble, 3 (LGALS3),
transcript variant 2, non-coding RNA.
ACCESSION NR_003225 NM_194327
VERSION NR_003225.2 GI:294345472
KEYWORDS RefSeq.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1973)
AUTHORS Woodward,A.M., Mauris,J. and Argueso,P.
TITLE Binding of transmembrane mucins to galectin-3 limits herpesvirus 1
infection of human corneal keratinocytes
JOURNAL J. Virol. 87 (10), 5841-5847 (2013)
PUBMED 23487460
REMARK GeneRIF: Together, these results indicate that human herpesvirus 1
exploits galectin-3 to enhance virus attachment to host cells and
support a protective role for transmembrane by masking viral entry
mediators on the epithelial glycocalyx.
REFERENCE 2 (bases 1 to 1973)
AUTHORS Funasaka,T., Balan,V., Raz,A. and Wong,R.W.
TITLE Nucleoporin Nup98 mediates galectin-3 nuclear-cytoplasmic
trafficking
JOURNAL Biochem. Biophys. Res. Commun. 434 (1), 155-161 (2013)
PUBMED 23541576
REMARK GeneRIF: Nup98 RNA interference significantly suppresses downstream
mRNA expression in the ss-catenin pathway, while nuclear galectin-3
binds to ss-catenin to inhibit transcriptional activity.
REFERENCE 3 (bases 1 to 1973)
AUTHORS Cheng,C.L., Hou,H.A., Lee,M.C., Liu,C.Y., Jhuang,J.Y., Lai,Y.J.,
Lin,C.W., Chen,H.Y., Liu,F.T., Chou,W.C., Chen,C.Y., Tang,J.L.,
Yao,M., Huang,S.Y., Ko,B.S., Wu,S.J., Tsay,W. and Tien,H.F.
TITLE Higher bone marrow LGALS3 expression is an independent unfavorable
prognostic factor for overall survival in patients with acute
myeloid leukemia
JOURNAL Blood 121 (16), 3172-3180 (2013)
PUBMED 23449638
REMARK GeneRIF: Higher bone marrow LGALS3 expression is an independent
poor prognostic factor for overall survival and may serve as a
potential therapeutic target.
REFERENCE 4 (bases 1 to 1973)
AUTHORS Guha,P., Kaptan,E., Bandyopadhyaya,G., Kaczanowska,S., Davila,E.,
Thompson,K., Martin,S.S., Kalvakolanu,D.V., Vasta,G.R. and Ahmed,H.
TITLE Cod glycopeptide with picomolar affinity to galectin-3 suppresses
T-cell apoptosis and prostate cancer metastasis
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 110 (13), 5052-5057 (2013)
PUBMED 23479624
REMARK GeneRIF: Cod glycopeptide with picomolar affinity to galectin-3
suppresses T-cell apoptosis and prostate cancer metastasis.
REFERENCE 5 (bases 1 to 1973)
AUTHORS Raimond,J., Zimonjic,D.B., Mignon,C., Mattei,M., Popescu,N.C.,
Monsigny,M. and Legrand,A.
TITLE Mapping of the galectin-3 gene (LGALS3) to human chromosome 14 at
region 14q21-22
JOURNAL Mamm. Genome 8 (9), 706-707 (1997)
PUBMED 9271684
REFERENCE 6 (bases 1 to 1973)
AUTHORS Rosenberg,I., Cherayil,B.J., Isselbacher,K.J. and Pillai,S.
TITLE Mac-2-binding glycoproteins. Putative ligands for a cytosolic
beta-galactoside lectin
JOURNAL J. Biol. Chem. 266 (28), 18731-18736 (1991)
PUBMED 1917996
REFERENCE 7 (bases 1 to 1973)
AUTHORS Raz,A., Carmi,P., Raz,T., Hogan,V., Mohamed,A. and Wolman,S.R.
TITLE Molecular cloning and chromosomal mapping of a human
galactoside-binding protein
JOURNAL Cancer Res. 51 (8), 2173-2178 (1991)
PUBMED 2009535
REFERENCE 8 (bases 1 to 1973)
AUTHORS Oda,Y., Leffler,H., Sakakura,Y., Kasai,K. and Barondes,S.H.
TITLE Human breast carcinoma cDNA encoding a galactoside-binding lectin
homologous to mouse Mac-2 antigen
JOURNAL Gene 99 (2), 279-283 (1991)
PUBMED 2022338
REFERENCE 9 (bases 1 to 1973)
AUTHORS Gitt,M.A. and Barondes,S.H.
TITLE Genomic sequence and organization of two members of a human lectin
gene family
JOURNAL Biochemistry 30 (1), 82-89 (1991)
PUBMED 1988031
REFERENCE 10 (bases 1 to 1973)
AUTHORS Cherayil,B.J., Chaitovitz,S., Wong,C. and Pillai,S.
TITLE Molecular cloning of a human macrophage lectin specific for
galactose
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 87 (18), 7324-7328 (1990)
PUBMED 2402511
COMMENT REVIEWED REFSEQ: This record has been curated by NCBI staff. The
reference sequence was derived from BX641090.1, AL139316.5 and
BU681070.1.
On Apr 8, 2010 this sequence version replaced gi:115430224.
Summary: This gene encodes a member of the galectin family of
carbohydrate binding proteins. Members of this protein family have
an affinity for beta-galactosides. The encoded protein is
characterized by an N-terminal proline-rich tandem repeat domain
and a single C-terminal carbohydrate recognition domain. This
protein can self-associate through the N-terminal domain allowing
it to bind to multivalent saccharide ligands. This protein
localizes to the extracellular matrix, the cytoplasm and the
nucleus. This protein plays a role in numerous cellular functions
including apoptosis, innate immunity, cell adhesion and T-cell
regulation. Alternate splicing results in multiple transcript
variants.[provided by RefSeq, Apr 2010].
Transcript Variant: This variant (2) has an alternate 5' exon,
compared to variant 1. This variant is represented as non-coding
because the use of the 5'-most supported translational start codon,
as used in variant 1, renders the transcript a candidate for
nonsense-mediated mRNA decay (NMD).
Sequence Note: This RefSeq record was created from transcript and
genomic sequence data to make the sequence consistent with the
reference genome assembly. The genomic coordinates used for the
transcript record were based on transcript alignments.
Publication Note: This RefSeq record includes a subset of the
publications that are available for this gene. Please see the Gene
record to access additional publications.
COMPLETENESS: complete on the 3' end.
PRIMARY REFSEQ_SPAN PRIMARY_IDENTIFIER PRIMARY_SPAN COMP
1-170 BX641090.1 4-173
171-172 AL139316.5 89212-89213 c
173-1234 BX641090.1 174-1235
1235-1336 AL139316.5 88048-88149 c
1337-1436 BX641090.1 1338-1437
1437-1437 AL139316.5 86041-86041 c
1438-1825 BX641090.1 1439-1826
1826-1973 BU681070.1 1-148 c
FEATURES Location/Qualifiers
source 1..1973
/organism="Homo sapiens"
/mol_type="transcribed RNA"
/db_xref="taxon:9606"
/chromosome="14"
/map="14q22.3"
gene 1..1973
/gene="LGALS3"
/gene_synonym="CBP35; GAL3; GALBP; GALIG; L31; LGALS2;
MAC2"
/note="lectin, galactoside-binding, soluble, 3"
/db_xref="GeneID:3958"
/db_xref="HGNC:6563"
/db_xref="MIM:153619"
misc_RNA 1..1973
/gene="LGALS3"
/gene_synonym="CBP35; GAL3; GALBP; GALIG; L31; LGALS2;
MAC2"
/product="lectin, galactoside-binding, soluble, 3,
transcript variant 2"
/db_xref="GeneID:3958"
/db_xref="HGNC:6563"
/db_xref="MIM:153619"
exon 1..1386
/gene="LGALS3"
/gene_synonym="CBP35; GAL3; GALBP; GALIG; L31; LGALS2;
MAC2"
/inference="alignment:Splign:1.39.8"
variation 94
/gene="LGALS3"
/gene_synonym="CBP35; GAL3; GALBP; GALIG; L31; LGALS2;
MAC2"
/replace="a"
/replace="c"
/db_xref="dbSNP:79834356"
variation 95
/gene="LGALS3"
/gene_synonym="CBP35; GAL3; GALBP; GALIG; L31; LGALS2;
MAC2"
/replace="a"
/replace="c"
/db_xref="dbSNP:77139802"
variation 125
/gene="LGALS3"
/gene_synonym="CBP35; GAL3; GALBP; GALIG; L31; LGALS2;
MAC2"
/replace="a"
/replace="g"
/db_xref="dbSNP:137979468"
variation 127
/gene="LGALS3"
/gene_synonym="CBP35; GAL3; GALBP; GALIG; L31; LGALS2;
MAC2"
/replace="g"
/replace="t"
/db_xref="dbSNP:201060113"
variation 174
/gene="LGALS3"
/gene_synonym="CBP35; GAL3; GALBP; GALIG; L31; LGALS2;
MAC2"
/replace="c"
/replace="t"
/db_xref="dbSNP:77419946"
variation 202
/gene="LGALS3"
/gene_synonym="CBP35; GAL3; GALBP; GALIG; L31; LGALS2;
MAC2"
/replace="a"
/replace="g"
/db_xref="dbSNP:149471573"
variation 291
/gene="LGALS3"
/gene_synonym="CBP35; GAL3; GALBP; GALIG; L31; LGALS2;
MAC2"
/replace="a"
/replace="t"
/db_xref="dbSNP:45509294"
variation 311
/gene="LGALS3"
/gene_synonym="CBP35; GAL3; GALBP; GALIG; L31; LGALS2;
MAC2"
/replace="a"
/replace="g"
/db_xref="dbSNP:181801745"
variation 320
/gene="LGALS3"
/gene_synonym="CBP35; GAL3; GALBP; GALIG; L31; LGALS2;
MAC2"
/replace="a"
/replace="g"
/db_xref="dbSNP:61975413"
misc_feature 392..685
/gene="LGALS3"
/gene_synonym="CBP35; GAL3; GALBP; GALIG; L31; LGALS2;
MAC2"
/inference="COORDINATES:
alignment:Blast2seq::RefSeq|NM_002306.3"
/note="primary ORF has stop codon >50 nucleotides from the
terminal splice site; nonsense-mediated decay (NMD)
candidate"
variation 409
/gene="LGALS3"
/gene_synonym="CBP35; GAL3; GALBP; GALIG; L31; LGALS2;
MAC2"
/replace="a"
/replace="g"
/db_xref="dbSNP:78001930"
variation 416
/gene="LGALS3"
/gene_synonym="CBP35; GAL3; GALBP; GALIG; L31; LGALS2;
MAC2"
/replace="a"
/replace="g"
/db_xref="dbSNP:115891972"
variation 424
/gene="LGALS3"
/gene_synonym="CBP35; GAL3; GALBP; GALIG; L31; LGALS2;
MAC2"
/replace="c"
/replace="t"
/db_xref="dbSNP:376924677"
variation 446
/gene="LGALS3"
/gene_synonym="CBP35; GAL3; GALBP; GALIG; L31; LGALS2;
MAC2"
/replace="c"
/replace="t"
/db_xref="dbSNP:199699629"
variation 452
/gene="LGALS3"
/gene_synonym="CBP35; GAL3; GALBP; GALIG; L31; LGALS2;
MAC2"
/replace="a"
/replace="g"
/db_xref="dbSNP:368909393"
variation 485
/gene="LGALS3"
/gene_synonym="CBP35; GAL3; GALBP; GALIG; L31; LGALS2;
MAC2"
/replace="a"
/replace="g"
/db_xref="dbSNP:116659993"
variation 523
/gene="LGALS3"
/gene_synonym="CBP35; GAL3; GALBP; GALIG; L31; LGALS2;
MAC2"
/replace="c"
/replace="t"
/db_xref="dbSNP:114186444"
variation 537
/gene="LGALS3"
/gene_synonym="CBP35; GAL3; GALBP; GALIG; L31; LGALS2;
MAC2"
/replace="c"
/replace="t"
/db_xref="dbSNP:36059179"
variation 540
/gene="LGALS3"
/gene_synonym="CBP35; GAL3; GALBP; GALIG; L31; LGALS2;
MAC2"
/replace="c"
/replace="t"
/db_xref="dbSNP:74050920"
variation 584
/gene="LGALS3"
/gene_synonym="CBP35; GAL3; GALBP; GALIG; L31; LGALS2;
MAC2"
/replace="a"
/replace="g"
/db_xref="dbSNP:373732487"
variation 608
/gene="LGALS3"
/gene_synonym="CBP35; GAL3; GALBP; GALIG; L31; LGALS2;
MAC2"
/replace="a"
/replace="g"
/db_xref="dbSNP:28415601"
variation 653
/gene="LGALS3"
/gene_synonym="CBP35; GAL3; GALBP; GALIG; L31; LGALS2;
MAC2"
/replace="c"
/replace="t"
/db_xref="dbSNP:2075598"
variation 672
/gene="LGALS3"
/gene_synonym="CBP35; GAL3; GALBP; GALIG; L31; LGALS2;
MAC2"
/replace="c"
/replace="t"
/db_xref="dbSNP:375560337"
variation 702
/gene="LGALS3"
/gene_synonym="CBP35; GAL3; GALBP; GALIG; L31; LGALS2;
MAC2"
/replace="c"
/replace="t"
/db_xref="dbSNP:186115963"
variation 754
/gene="LGALS3"
/gene_synonym="CBP35; GAL3; GALBP; GALIG; L31; LGALS2;
MAC2"
/replace="c"
/replace="t"
/db_xref="dbSNP:78054476"
variation 856
/gene="LGALS3"
/gene_synonym="CBP35; GAL3; GALBP; GALIG; L31; LGALS2;
MAC2"
/replace="g"
/replace="t"
/db_xref="dbSNP:377064913"
variation 1011..1013
/gene="LGALS3"
/gene_synonym="CBP35; GAL3; GALBP; GALIG; L31; LGALS2;
MAC2"
/replace=""
/replace="ctg"
/db_xref="dbSNP:10606761"
variation 1013..1015
/gene="LGALS3"
/gene_synonym="CBP35; GAL3; GALBP; GALIG; L31; LGALS2;
MAC2"
/replace=""
/replace="gct"
/db_xref="dbSNP:60179062"
variation 1013
/gene="LGALS3"
/gene_synonym="CBP35; GAL3; GALBP; GALIG; L31; LGALS2;
MAC2"
/replace="a"
/replace="c"
/db_xref="dbSNP:201605915"
variation 1056
/gene="LGALS3"
/gene_synonym="CBP35; GAL3; GALBP; GALIG; L31; LGALS2;
MAC2"
/replace="a"
/replace="t"
/db_xref="dbSNP:377694711"
variation 1062
/gene="LGALS3"
/gene_synonym="CBP35; GAL3; GALBP; GALIG; L31; LGALS2;
MAC2"
/replace="c"
/replace="g"
/db_xref="dbSNP:370981249"
variation 1068
/gene="LGALS3"
/gene_synonym="CBP35; GAL3; GALBP; GALIG; L31; LGALS2;
MAC2"
/replace="c"
/replace="t"
/db_xref="dbSNP:188973411"
variation 1073
/gene="LGALS3"
/gene_synonym="CBP35; GAL3; GALBP; GALIG; L31; LGALS2;
MAC2"
/replace="c"
/replace="t"
/db_xref="dbSNP:202159462"
variation 1074
/gene="LGALS3"
/gene_synonym="CBP35; GAL3; GALBP; GALIG; L31; LGALS2;
MAC2"
/replace="a"
/replace="g"
/db_xref="dbSNP:11538648"
variation 1116
/gene="LGALS3"
/gene_synonym="CBP35; GAL3; GALBP; GALIG; L31; LGALS2;
MAC2"
/replace="c"
/replace="t"
/db_xref="dbSNP:181337247"
variation 1117
/gene="LGALS3"
/gene_synonym="CBP35; GAL3; GALBP; GALIG; L31; LGALS2;
MAC2"
/replace="a"
/replace="g"
/db_xref="dbSNP:367771588"
variation 1156
/gene="LGALS3"
/gene_synonym="CBP35; GAL3; GALBP; GALIG; L31; LGALS2;
MAC2"
/replace="c"
/replace="g"
/db_xref="dbSNP:199980622"
variation 1181
/gene="LGALS3"
/gene_synonym="CBP35; GAL3; GALBP; GALIG; L31; LGALS2;
MAC2"
/replace="c"
/replace="g"
/db_xref="dbSNP:200440596"
variation 1182
/gene="LGALS3"
/gene_synonym="CBP35; GAL3; GALBP; GALIG; L31; LGALS2;
MAC2"
/replace="c"
/replace="t"
/db_xref="dbSNP:375563484"
variation 1183
/gene="LGALS3"
/gene_synonym="CBP35; GAL3; GALBP; GALIG; L31; LGALS2;
MAC2"
/replace="a"
/replace="g"
/db_xref="dbSNP:201423229"
variation 1202
/gene="LGALS3"
/gene_synonym="CBP35; GAL3; GALBP; GALIG; L31; LGALS2;
MAC2"
/replace="a"
/replace="c"
/db_xref="dbSNP:201924703"
variation 1204
/gene="LGALS3"
/gene_synonym="CBP35; GAL3; GALBP; GALIG; L31; LGALS2;
MAC2"
/replace="c"
/replace="t"
/db_xref="dbSNP:11538647"
variation 1228
/gene="LGALS3"
/gene_synonym="CBP35; GAL3; GALBP; GALIG; L31; LGALS2;
MAC2"
/replace="a"
/replace="g"
/db_xref="dbSNP:374075223"
variation 1234
/gene="LGALS3"
/gene_synonym="CBP35; GAL3; GALBP; GALIG; L31; LGALS2;
MAC2"
/replace="c"
/replace="g"
/db_xref="dbSNP:375132388"
variation 1235
/gene="LGALS3"
/gene_synonym="CBP35; GAL3; GALBP; GALIG; L31; LGALS2;
MAC2"
/replace="a"
/replace="c"
/db_xref="dbSNP:4644"
variation 1244
/gene="LGALS3"
/gene_synonym="CBP35; GAL3; GALBP; GALIG; L31; LGALS2;
MAC2"
/replace="c"
/replace="t"
/db_xref="dbSNP:372168966"
variation 1257
/gene="LGALS3"
/gene_synonym="CBP35; GAL3; GALBP; GALIG; L31; LGALS2;
MAC2"
/replace="c"
/replace="t"
/db_xref="dbSNP:61735588"
variation 1298
/gene="LGALS3"
/gene_synonym="CBP35; GAL3; GALBP; GALIG; L31; LGALS2;
MAC2"
/replace="g"
/replace="t"
/db_xref="dbSNP:201462121"
variation 1324
/gene="LGALS3"
/gene_synonym="CBP35; GAL3; GALBP; GALIG; L31; LGALS2;
MAC2"
/replace="c"
/replace="g"
/db_xref="dbSNP:148184206"
variation 1336
/gene="LGALS3"
/gene_synonym="CBP35; GAL3; GALBP; GALIG; L31; LGALS2;
MAC2"
/replace="a"
/replace="c"
/db_xref="dbSNP:4652"
variation 1338
/gene="LGALS3"
/gene_synonym="CBP35; GAL3; GALBP; GALIG; L31; LGALS2;
MAC2"
/replace="c"
/replace="t"
/db_xref="dbSNP:78964872"
variation 1346
/gene="LGALS3"
/gene_synonym="CBP35; GAL3; GALBP; GALIG; L31; LGALS2;
MAC2"
/replace="a"
/replace="c"
/db_xref="dbSNP:200922957"
variation 1353
/gene="LGALS3"
/gene_synonym="CBP35; GAL3; GALBP; GALIG; L31; LGALS2;
MAC2"
/replace="c"
/replace="t"
/db_xref="dbSNP:372459819"
variation 1356
/gene="LGALS3"
/gene_synonym="CBP35; GAL3; GALBP; GALIG; L31; LGALS2;
MAC2"
/replace="g"
/replace="t"
/db_xref="dbSNP:377311837"
variation 1384
/gene="LGALS3"
/gene_synonym="CBP35; GAL3; GALBP; GALIG; L31; LGALS2;
MAC2"
/replace="c"
/replace="g"
/db_xref="dbSNP:369880363"
exon 1387..1475
/gene="LGALS3"
/gene_synonym="CBP35; GAL3; GALBP; GALIG; L31; LGALS2;
MAC2"
/inference="alignment:Splign:1.39.8"
variation 1430
/gene="LGALS3"
/gene_synonym="CBP35; GAL3; GALBP; GALIG; L31; LGALS2;
MAC2"
/replace="a"
/replace="g"
/db_xref="dbSNP:201398647"
variation 1438
/gene="LGALS3"
/gene_synonym="CBP35; GAL3; GALBP; GALIG; L31; LGALS2;
MAC2"
/replace="a"
/replace="g"
/db_xref="dbSNP:370418608"
variation 1475
/gene="LGALS3"
/gene_synonym="CBP35; GAL3; GALBP; GALIG; L31; LGALS2;
MAC2"
/replace="a"
/replace="g"
/db_xref="dbSNP:374133862"
exon 1476..1641
/gene="LGALS3"
/gene_synonym="CBP35; GAL3; GALBP; GALIG; L31; LGALS2;
MAC2"
/inference="alignment:Splign:1.39.8"
variation 1482
/gene="LGALS3"
/gene_synonym="CBP35; GAL3; GALBP; GALIG; L31; LGALS2;
MAC2"
/replace="c"
/replace="t"
/db_xref="dbSNP:371871619"
variation 1492
/gene="LGALS3"
/gene_synonym="CBP35; GAL3; GALBP; GALIG; L31; LGALS2;
MAC2"
/replace="c"
/replace="g"
/db_xref="dbSNP:199729394"
variation 1503
/gene="LGALS3"
/gene_synonym="CBP35; GAL3; GALBP; GALIG; L31; LGALS2;
MAC2"
/replace="c"
/replace="t"
/db_xref="dbSNP:184778469"
variation 1506
/gene="LGALS3"
/gene_synonym="CBP35; GAL3; GALBP; GALIG; L31; LGALS2;
MAC2"
/replace="c"
/replace="t"
/db_xref="dbSNP:145296140"
variation 1528
/gene="LGALS3"
/gene_synonym="CBP35; GAL3; GALBP; GALIG; L31; LGALS2;
MAC2"
/replace="c"
/replace="t"
/db_xref="dbSNP:376506811"
variation 1529
/gene="LGALS3"
/gene_synonym="CBP35; GAL3; GALBP; GALIG; L31; LGALS2;
MAC2"
/replace="a"
/replace="g"
/db_xref="dbSNP:201865041"
variation 1542
/gene="LGALS3"
/gene_synonym="CBP35; GAL3; GALBP; GALIG; L31; LGALS2;
MAC2"
/replace="c"
/replace="t"
/db_xref="dbSNP:201301078"
variation 1545
/gene="LGALS3"
/gene_synonym="CBP35; GAL3; GALBP; GALIG; L31; LGALS2;
MAC2"
/replace="c"
/replace="t"
/db_xref="dbSNP:137885280"
variation 1555
/gene="LGALS3"
/gene_synonym="CBP35; GAL3; GALBP; GALIG; L31; LGALS2;
MAC2"
/replace="a"
/replace="g"
/db_xref="dbSNP:189412756"
variation 1592
/gene="LGALS3"
/gene_synonym="CBP35; GAL3; GALBP; GALIG; L31; LGALS2;
MAC2"
/replace="a"
/replace="g"
/db_xref="dbSNP:10148371"
variation 1607
/gene="LGALS3"
/gene_synonym="CBP35; GAL3; GALBP; GALIG; L31; LGALS2;
MAC2"
/replace="c"
/replace="t"
/db_xref="dbSNP:200686001"
variation 1616
/gene="LGALS3"
/gene_synonym="CBP35; GAL3; GALBP; GALIG; L31; LGALS2;
MAC2"
/replace="c"
/replace="t"
/db_xref="dbSNP:373019488"
exon 1642..1956
/gene="LGALS3"
/gene_synonym="CBP35; GAL3; GALBP; GALIG; L31; LGALS2;
MAC2"
/inference="alignment:Splign:1.39.8"
variation 1642
/gene="LGALS3"
/gene_synonym="CBP35; GAL3; GALBP; GALIG; L31; LGALS2;
MAC2"
/replace="a"
/replace="g"
/db_xref="dbSNP:201096256"
variation 1647
/gene="LGALS3"
/gene_synonym="CBP35; GAL3; GALBP; GALIG; L31; LGALS2;
MAC2"
/replace="a"
/replace="t"
/db_xref="dbSNP:11125"
variation 1702
/gene="LGALS3"
/gene_synonym="CBP35; GAL3; GALBP; GALIG; L31; LGALS2;
MAC2"
/replace="c"
/replace="t"
/db_xref="dbSNP:11001"
variation 1728
/gene="LGALS3"
/gene_synonym="CBP35; GAL3; GALBP; GALIG; L31; LGALS2;
MAC2"
/replace="a"
/replace="c"
/db_xref="dbSNP:374550386"
variation 1754
/gene="LGALS3"
/gene_synonym="CBP35; GAL3; GALBP; GALIG; L31; LGALS2;
MAC2"
/replace="c"
/replace="t"
/db_xref="dbSNP:1042869"
variation 1763
/gene="LGALS3"
/gene_synonym="CBP35; GAL3; GALBP; GALIG; L31; LGALS2;
MAC2"
/replace="c"
/replace="t"
/db_xref="dbSNP:150161752"
variation 1783
/gene="LGALS3"
/gene_synonym="CBP35; GAL3; GALBP; GALIG; L31; LGALS2;
MAC2"
/replace="c"
/replace="t"
/db_xref="dbSNP:138668217"
variation 1799
/gene="LGALS3"
/gene_synonym="CBP35; GAL3; GALBP; GALIG; L31; LGALS2;
MAC2"
/replace="c"
/replace="t"
/db_xref="dbSNP:1042896"
variation 1813
/gene="LGALS3"
/gene_synonym="CBP35; GAL3; GALBP; GALIG; L31; LGALS2;
MAC2"
/replace="a"
/replace="t"
/db_xref="dbSNP:61975414"
variation 1815
/gene="LGALS3"
/gene_synonym="CBP35; GAL3; GALBP; GALIG; L31; LGALS2;
MAC2"
/replace="a"
/replace="t"
/db_xref="dbSNP:74959172"
variation 1816
/gene="LGALS3"
/gene_synonym="CBP35; GAL3; GALBP; GALIG; L31; LGALS2;
MAC2"
/replace=""
/replace="a"
/db_xref="dbSNP:71659941"
variation 1818..1819
/gene="LGALS3"
/gene_synonym="CBP35; GAL3; GALBP; GALIG; L31; LGALS2;
MAC2"
/replace=""
/replace="a"
/replace="aa"
/db_xref="dbSNP:71736436"
variation 1832
/gene="LGALS3"
/gene_synonym="CBP35; GAL3; GALBP; GALIG; L31; LGALS2;
MAC2"
/replace="c"
/replace="t"
/db_xref="dbSNP:1042906"
variation 1847
/gene="LGALS3"
/gene_synonym="CBP35; GAL3; GALBP; GALIG; L31; LGALS2;
MAC2"
/replace="a"
/replace="g"
/db_xref="dbSNP:371349669"
variation 1864
/gene="LGALS3"
/gene_synonym="CBP35; GAL3; GALBP; GALIG; L31; LGALS2;
MAC2"
/replace="a"
/replace="c"
/db_xref="dbSNP:1042918"
variation 1876
/gene="LGALS3"
/gene_synonym="CBP35; GAL3; GALBP; GALIG; L31; LGALS2;
MAC2"
/replace="a"
/replace="c"
/db_xref="dbSNP:369980295"
variation 1894
/gene="LGALS3"
/gene_synonym="CBP35; GAL3; GALBP; GALIG; L31; LGALS2;
MAC2"
/replace="c"
/replace="t"
/db_xref="dbSNP:182580267"
variation 1949..1950
/gene="LGALS3"
/gene_synonym="CBP35; GAL3; GALBP; GALIG; L31; LGALS2;
MAC2"
/replace=""
/replace="at"
/db_xref="dbSNP:149894805"
ORIGIN
gtgtgcaaatagaggaataaatagcagggcagcaactatgtctggaggtcattgtctttcctgtctcagtagtaatcaatcactgcttatcttcaaaaacccagagtaggggatggggcagttagtggggacagagggcagatgggtaagattcagagcacaggctagtgtgacggaagtttaaacttgtgagttaaatagggtttggcaatctagctggatagcatccctgccccttgaagagatgtttttgtggcgccacactactgacttaggcataatgcctagagatggattagaactgcacaatgaactagtggtgaggttcagtttaatggaaattggtgaaagcttttaggataaaatgataatctttgtttctttcaggaaaatggcagacaatttttcggtaagtgttttatgcctgtttcttccccttgatcagctccacatggttgagggttgggggttttgtttttaccatgactttcccttttcactctcccactgcgtggcttcccctggactcatttgtccaatgagggcttgcaagctggagccttgtttttccagcagcagatttgggaagaaagccaggcagagcgaggcctgggactcactcacagtaaccctttcaccaaaaggcccagggcggaagggagtggactctgccggcaggagctgagaaatcctctgagtagcgggaagtgcggtacagtctgggcattctgatgtttgtgattgtttttctcacggtgatgaaaaagtatgtgctataagtagaggagcgctaactcctgacttgagctaattatgaaaatgcagccctccctgatctgagacgttgggaggcaagaataaagtgaaaaagtatatgtaatcccaacatctaattttagtcttagaaactcaaactattaataagtggaaaaagtttaatgatatgcatgtaatgcctttgccatattcctctccttcttagatcacatattcctattttcctgaaaattctgcttttgagaatgctttctgtcccgtaattgtgtatgtctttctttccagctccatgatgcgttatctgggtctggaaacccaaaccctcaaggatggcctggcgcatgggggaaccagcctgctggggcagggggctacccaggggcttcctatcctggggcctaccccgggcaggcacccccaggggcttatcctggacaggcacctccaggcgcctaccctggagcacctggagcttatcccggagcacctgcacctggagtctacccagggccacccagcggccctggggcctacccatcttctggacagccaagtgccaccggagcctaccctgccactggcccctatggcgcccctgctgggccactgattgtgccttataacctgcctttgcctgggggagtggtgcctcgcatgctgataacaattctgggcacggtgaagcccaatgcaaacagaattgctttagatttccaaagagggaatgatgttgccttccactttaacccacgcttcaatgagaacaacaggagagtcattgtttgcaatacaaagctggataataactggggaagggaagaaagacagtcggttttcccatttgaaagtgggaaaccattcaaaatacaagtactggttgaacctgaccacttcaaggttgcagtgaatgatgctcacttgttgcagtacaatcatcgggttaaaaaactcaatgaaatcagcaaactgggaatttctggtgacatagacctcaccagtgcttcatataccatgatataatctgaaaggggcagattaaaaaaaaaaaaagaatctaaaccttacatgtgtaaaggtttcatgttcactgtgagtgaaaatttttacattcatcaatatccctcttgtaagtcatctacttaataaatattacagtgaattacctgtctcaatatgtcaaaaaaaaaaaaaaaaaa
//
ANNOTATIONS from NCBI Entrez Gene (20130726):
GeneID:3958 -> Molecular function: GO:0005515 [protein binding] evidence: IPI
GeneID:3958 -> Molecular function: GO:0019863 [IgE binding] evidence: IEA
GeneID:3958 -> Molecular function: GO:0030246 [carbohydrate binding] evidence: IEA
GeneID:3958 -> Biological process: GO:0001501 [skeletal system development] evidence: IEA
GeneID:3958 -> Biological process: GO:0006397 [mRNA processing] evidence: IEA
GeneID:3958 -> Biological process: GO:0008380 [RNA splicing] evidence: IEA
GeneID:3958 -> Biological process: GO:0030154 [cell differentiation] evidence: IEA
GeneID:3958 -> Biological process: GO:0030198 [extracellular matrix organization] evidence: IEA
GeneID:3958 -> Biological process: GO:0045087 [innate immune response] evidence: TAS
GeneID:3958 -> Cellular component: GO:0005578 [proteinaceous extracellular matrix] evidence: IEA
GeneID:3958 -> Cellular component: GO:0005634 [nucleus] evidence: IDA
GeneID:3958 -> Cellular component: GO:0005681 [spliceosomal complex] evidence: IEA
GeneID:3958 -> Cellular component: GO:0005737 [cytoplasm] evidence: IDA
GeneID:3958 -> Cellular component: GO:0005743 [mitochondrial inner membrane] evidence: IDA
GeneID:3958 -> Cellular component: GO:0005886 [plasma membrane] evidence: TAS
GeneID:3958 -> Cellular component: GO:0031012 [extracellular matrix] evidence: IDA
by
@meso_cacase at
DBCLS
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