Home |
Help |
Advanced search
2024-04-16 23:20:06, GGRNA : RefSeq release 60 (20130726)
LOCUS NM_016376 7959 bp mRNA linear PRI 11-MAY-2013
DEFINITION Homo sapiens ankyrin repeat and FYVE domain containing 1 (ANKFY1),
transcript variant 1, mRNA.
ACCESSION NM_016376
VERSION NM_016376.3 GI:110815812
KEYWORDS RefSeq.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 7959)
AUTHORS Zhang,J., Reiling,C., Reinecke,J.B., Prislan,I., Marky,L.A.,
Sorgen,P.L., Naslavsky,N. and Caplan,S.
TITLE Rabankyrin-5 interacts with EHD1 and Vps26 to regulate endocytic
trafficking and retromer function
JOURNAL Traffic 13 (5), 745-757 (2012)
PUBMED 22284051
REMARK GeneRIF: Rabankyrin-5 interacts with EHD1 and Vps26 to regulate
endocytic trafficking and retromer function
REFERENCE 2 (bases 1 to 7959)
AUTHORS Bouslam,N., Bouhouche,A., Benomar,A., Hanein,S., Klebe,S.,
Azzedine,H., Di Giandomenico,S., Boland-Auge,A., Santorelli,F.M.,
Durr,A., Brice,A., Yahyaoui,M. and Stevanin,G.
TITLE A novel locus for autosomal recessive spastic ataxia on chromosome
17p
JOURNAL Hum. Genet. 121 (3-4), 413-420 (2007)
PUBMED 17273843
REFERENCE 3 (bases 1 to 7959)
AUTHORS Schnatwinkel,C., Christoforidis,S., Lindsay,M.R.,
Uttenweiler-Joseph,S., Wilm,M., Parton,R.G. and Zerial,M.
TITLE The Rab5 effector Rabankyrin-5 regulates and coordinates different
endocytic mechanisms
JOURNAL PLoS Biol. 2 (9), E261 (2004)
PUBMED 15328530
REMARK GeneRIF: Rab5 regulates and coordinates different endocytic
mechanisms through its effector Rabankyrin-5
REFERENCE 4 (bases 1 to 7959)
AUTHORS Kuriyama,H., Asakawa,S., Minoshima,S., Maruyama,H., Ishii,N.,
Ito,K., Gejyo,F., Arakawa,M., Shimizu,N. and Kuwano,R.
TITLE Characterization and chromosomal mapping of a novel human gene,
ANKHZN
JOURNAL Gene 253 (2), 151-160 (2000)
PUBMED 10940552
REFERENCE 5 (bases 1 to 7959)
AUTHORS Ito,K., Ishii,N., Miyashita,A., Tominaga,K., Kuriyama,H.,
Maruyama,H., Shirai,M., Naito,M., Arakawa,M. and Kuwano,R.
TITLE Molecular cloning of a novel 130-kDa cytoplasmic protein, Ankhzn,
containing Ankyrin repeats hooked to a zinc finger motif
JOURNAL Biochem. Biophys. Res. Commun. 257 (1), 206-213 (1999)
PUBMED 10092534
REMARK GeneRIF: Characterization of the related mouse gene
COMMENT REVIEWED REFSEQ: This record has been curated by NCBI staff. The
reference sequence was derived from DA856905.1, AK057047.1 and
AC087292.14.
On Jul 28, 2006 this sequence version replaced gi:31317211.
Summary: This gene encodes a cytoplasmic protein that contains a
coiled-coil structure and a BTB/POZ domain at its N-terminus,
ankyrin repeats in the middle portion, and a FYVE-finger motif at
its C-terminus. This protein belongs to a subgroup of double zinc
finger proteins which may be involved in vesicle or protein
transport. Alternate splicing results in multiple transcript
variants of this gene. [provided by RefSeq, Apr 2012].
Transcript Variant: This variant (1) encodes isoform (1).
##Evidence-Data-START##
Transcript exon combination :: BC060812.1, AK292930.1 [ECO:0000332]
RNAseq introns :: mixed/partial sample support
ERS025081, ERS025082 [ECO:0000350]
##Evidence-Data-END##
COMPLETENESS: complete on the 3' end.
PRIMARY REFSEQ_SPAN PRIMARY_IDENTIFIER PRIMARY_SPAN COMP
1-551 DA856905.1 1-551
552-1558 AK057047.1 410-1416
1559-1559 AC087292.14 172048-172048 c
1560-3494 AK057047.1 1418-3352
3495-7959 AC087292.14 150422-154886 c
FEATURES Location/Qualifiers
source 1..7959
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/chromosome="17"
/map="17p13.3"
gene 1..7959
/gene="ANKFY1"
/gene_synonym="ANKHZN; BTBD23; ZFYVE14"
/note="ankyrin repeat and FYVE domain containing 1"
/db_xref="GeneID:51479"
/db_xref="HGNC:20763"
/db_xref="MIM:607927"
exon 1..48
/gene="ANKFY1"
/gene_synonym="ANKHZN; BTBD23; ZFYVE14"
/inference="alignment:Splign:1.39.8"
CDS 39..3551
/gene="ANKFY1"
/gene_synonym="ANKHZN; BTBD23; ZFYVE14"
/note="isoform 1 is encoded by transcript variant 1;
ankyrin repeat hooked to zinc finger motif; Rabankyrin-5;
ankyrin repeat and FYVE domain-containing protein 1;
ankyrin repeats hooked to a zinc finger motif"
/codon_start=1
/product="ankyrin repeat and FYVE domain-containing
protein 1 isoform 1"
/protein_id="NP_057460.3"
/db_xref="GI:110815813"
/db_xref="CCDS:CCDS42236.1"
/db_xref="GeneID:51479"
/db_xref="HGNC:20763"
/db_xref="MIM:607927"
/translation="
MAEEEVAKLEKHLMLLRQEYVKLQKKLAETEKRCALLAAQANKESSSESFISRLLAIVADLYEQEQYSDLKIKVGDRHISAHKFVLAARSDSWSLANLSSTKELDLSDANPEVTMTMLRWIYTDELEFREDDVFLTELMKLANRFQLQLLRERCEKGVMSLVNVRNCIRFYQTAEELNASTLMNYCAEIIASHWDDLRKEDFSSMSAQLLYKMIKSKTEYPLHKAIKVEREDVVFLYLIEMDSQLPGKLNEADHNGDLALDLALSRRLESIATTLVSHKADVDMVDKSGWSLLHKGIQRGDLFAATFLIKNGAFVNAATLGAQETPLHLVALYSSKKHSADVMSEMAQIAEALLQAGANPNMQDSKGRTPLHVSIMAGNEYVFSQLLQCKQLDLELKDHEGSTALWLAVQHITVSSDQSVNPFEDVPVVNGTSFDENSFAARLIQRGSHTDAPDTATGNCLLQRAAGAGNEAAALFLATNGAHVNHRNKWGETPLHTACRHGLANLTAELLQQGANPNLQTEEALPLPKEAASLTSLADSVHLQTPLHMAIAYNHPDVVSVILEQKANALHATNNLQIIPDFSLKDSRDQTVLGLALWTGMHTIAAQLLGSGAAINDTMSDGQTLLHMAIQRQDSKSALFLLEHQADINVSRTQDGETALQLAIRNQLPLVVDAICTRGADMSVPDEKGNPPLWLALANNLEDIASTLVRHGCDATCWGPGPGGCLQTLLHRAIDENNEPTACFLIRSGCDVNSPRQPGANGEGEEEARDGQTPLHLAASWGLEETVQCLLEFGANVNAQDAEGRTPIHVAISSQHGVIIQLLVSHPDIHLNVRDRQGLTPFACAMTFKNNKSAEAILKRESGAAEQVDNKGRNFLHVAVQNSDIESVLFLISVHANVNSRVQDASKLTPLHLAVQAGSEIIVRNLLLAGAKVNELTKHRQTALHLAAQQDLPTICSVLLENGVDFAAVDENGNNALHLAVMHGRLNNIRVLLTECTVDAEAFNLRGQSPLHILGQYGKENAAAIFDLFLECMPGYPLDKPDADGSTVLLLAYMKGNANLCRAIVRSGARLGVNNNQGVNIFNYQVATKQLLFRLLDMLSKEPPWCDGSYCYECTARFGVTTRKHHCRHCGRLLCHKCSTKEIPIIKFDLNKPVRVCNICFDVLTLGGVS
"
misc_feature 42..44
/gene="ANKFY1"
/gene_synonym="ANKHZN; BTBD23; ZFYVE14"
/experiment="experimental evidence, no additional details
recorded"
/note="N-acetylalanine; propagated from
UniProtKB/Swiss-Prot (Q9P2R3.2); acetylation site"
misc_feature 216..506
/gene="ANKFY1"
/gene_synonym="ANKHZN; BTBD23; ZFYVE14"
/note="BTB/POZ domain; Region: BTB; pfam00651"
/db_xref="CDD:201372"
misc_feature 537..>743
/gene="ANKFY1"
/gene_synonym="ANKHZN; BTBD23; ZFYVE14"
/note="BTB And C-terminal Kelch; Region: BACK; smart00875"
/db_xref="CDD:197943"
misc_feature 687..779
/gene="ANKFY1"
/gene_synonym="ANKHZN; BTBD23; ZFYVE14"
/experiment="experimental evidence, no additional details
recorded"
/note="propagated from UniProtKB/Swiss-Prot (Q9P2R3.2);
Region: ANK 1"
misc_feature 693..1049
/gene="ANKFY1"
/gene_synonym="ANKHZN; BTBD23; ZFYVE14"
/note="ankyrin repeats; ankyrin repeats mediate
protein-protein interactions in very diverse families of
proteins. The number of ANK repeats in a protein can range
from 2 to over 20 (ankyrins, for example). ANK repeats may
occur in combinations with other...; Region: ANK; cd00204"
/db_xref="CDD:29261"
misc_feature 801..890
/gene="ANKFY1"
/gene_synonym="ANKHZN; BTBD23; ZFYVE14"
/experiment="experimental evidence, no additional details
recorded"
/note="propagated from UniProtKB/Swiss-Prot (Q9P2R3.2);
Region: ANK 2"
misc_feature 885..1274
/gene="ANKFY1"
/gene_synonym="ANKHZN; BTBD23; ZFYVE14"
/note="ankyrin repeats; ankyrin repeats mediate
protein-protein interactions in very diverse families of
proteins. The number of ANK repeats in a protein can range
from 2 to over 20 (ankyrins, for example). ANK repeats may
occur in combinations with other...; Region: ANK; cd00204"
/db_xref="CDD:29261"
misc_feature 900..989
/gene="ANKFY1"
/gene_synonym="ANKHZN; BTBD23; ZFYVE14"
/experiment="experimental evidence, no additional details
recorded"
/note="propagated from UniProtKB/Swiss-Prot (Q9P2R3.2);
Region: ANK 3"
misc_feature 915..1232
/gene="ANKFY1"
/gene_synonym="ANKHZN; BTBD23; ZFYVE14"
/note="Ankyrin repeats (3 copies); Region: Ank_2;
pfam12796"
/db_xref="CDD:205076"
misc_feature 1002..1124
/gene="ANKFY1"
/gene_synonym="ANKHZN; BTBD23; ZFYVE14"
/experiment="experimental evidence, no additional details
recorded"
/note="propagated from UniProtKB/Swiss-Prot (Q9P2R3.2);
Region: ANK 4"
misc_feature 1134..1226
/gene="ANKFY1"
/gene_synonym="ANKHZN; BTBD23; ZFYVE14"
/experiment="experimental evidence, no additional details
recorded"
/note="propagated from UniProtKB/Swiss-Prot (Q9P2R3.2);
Region: ANK 5"
misc_feature 1227..1727
/gene="ANKFY1"
/gene_synonym="ANKHZN; BTBD23; ZFYVE14"
/note="ankyrin repeats; ankyrin repeats mediate
protein-protein interactions in very diverse families of
proteins. The number of ANK repeats in a protein can range
from 2 to over 20 (ankyrins, for example). ANK repeats may
occur in combinations with other...; Region: ANK; cd00204"
/db_xref="CDD:29261"
misc_feature 1476..1742
/gene="ANKFY1"
/gene_synonym="ANKHZN; BTBD23; ZFYVE14"
/note="Ankyrin repeats (3 copies); Region: Ank_2;
pfam12796"
/db_xref="CDD:205076"
misc_feature 1506..1595
/gene="ANKFY1"
/gene_synonym="ANKHZN; BTBD23; ZFYVE14"
/experiment="experimental evidence, no additional details
recorded"
/note="propagated from UniProtKB/Swiss-Prot (Q9P2R3.2);
Region: ANK 6"
misc_feature 1662..2063
/gene="ANKFY1"
/gene_synonym="ANKHZN; BTBD23; ZFYVE14"
/note="ankyrin repeats; ankyrin repeats mediate
protein-protein interactions in very diverse families of
proteins. The number of ANK repeats in a protein can range
from 2 to over 20 (ankyrins, for example). ANK repeats may
occur in combinations with other...; Region: ANK; cd00204"
/db_xref="CDD:29261"
misc_feature 1662..1754
/gene="ANKFY1"
/gene_synonym="ANKHZN; BTBD23; ZFYVE14"
/experiment="experimental evidence, no additional details
recorded"
/note="propagated from UniProtKB/Swiss-Prot (Q9P2R3.2);
Region: ANK 7"
misc_feature 1677..1988
/gene="ANKFY1"
/gene_synonym="ANKHZN; BTBD23; ZFYVE14"
/note="Ankyrin repeats (3 copies); Region: Ank_2;
pfam12796"
/db_xref="CDD:205076"
misc_feature 1800..1889
/gene="ANKFY1"
/gene_synonym="ANKHZN; BTBD23; ZFYVE14"
/experiment="experimental evidence, no additional details
recorded"
/note="propagated from UniProtKB/Swiss-Prot (Q9P2R3.2);
Region: ANK 8"
misc_feature 1884..2411
/gene="ANKFY1"
/gene_synonym="ANKHZN; BTBD23; ZFYVE14"
/note="ankyrin repeats; ankyrin repeats mediate
protein-protein interactions in very diverse families of
proteins. The number of ANK repeats in a protein can range
from 2 to over 20 (ankyrins, for example). ANK repeats may
occur in combinations with other...; Region: ANK; cd00204"
/db_xref="CDD:29261"
misc_feature 1899..1988
/gene="ANKFY1"
/gene_synonym="ANKHZN; BTBD23; ZFYVE14"
/experiment="experimental evidence, no additional details
recorded"
/note="propagated from UniProtKB/Swiss-Prot (Q9P2R3.2);
Region: ANK 9"
misc_feature 1914..2180
/gene="ANKFY1"
/gene_synonym="ANKHZN; BTBD23; ZFYVE14"
/note="Ankyrin repeats (3 copies); Region: Ank_2;
pfam12796"
/db_xref="CDD:205076"
misc_feature 2001..2090
/gene="ANKFY1"
/gene_synonym="ANKHZN; BTBD23; ZFYVE14"
/experiment="experimental evidence, no additional details
recorded"
/note="propagated from UniProtKB/Swiss-Prot (Q9P2R3.2);
Region: ANK 10"
misc_feature 2100..2189
/gene="ANKFY1"
/gene_synonym="ANKHZN; BTBD23; ZFYVE14"
/experiment="experimental evidence, no additional details
recorded"
/note="propagated from UniProtKB/Swiss-Prot (Q9P2R3.2);
Region: ANK 11"
misc_feature 2211..2300
/gene="ANKFY1"
/gene_synonym="ANKHZN; BTBD23; ZFYVE14"
/experiment="experimental evidence, no additional details
recorded"
/note="propagated from UniProtKB/Swiss-Prot (Q9P2R3.2);
Region: ANK 12"
misc_feature 2226..2543
/gene="ANKFY1"
/gene_synonym="ANKHZN; BTBD23; ZFYVE14"
/note="Ankyrin repeats (3 copies); Region: Ank_2;
pfam12796"
/db_xref="CDD:205076"
misc_feature 2343..2819
/gene="ANKFY1"
/gene_synonym="ANKHZN; BTBD23; ZFYVE14"
/note="ankyrin repeats; ankyrin repeats mediate
protein-protein interactions in very diverse families of
proteins. The number of ANK repeats in a protein can range
from 2 to over 20 (ankyrins, for example). ANK repeats may
occur in combinations with other...; Region: ANK; cd00204"
/db_xref="CDD:29261"
misc_feature 2346..2435
/gene="ANKFY1"
/gene_synonym="ANKHZN; BTBD23; ZFYVE14"
/experiment="experimental evidence, no additional details
recorded"
/note="propagated from UniProtKB/Swiss-Prot (Q9P2R3.2);
Region: ANK 13"
misc_feature 2445..2537
/gene="ANKFY1"
/gene_synonym="ANKHZN; BTBD23; ZFYVE14"
/experiment="experimental evidence, no additional details
recorded"
/note="propagated from UniProtKB/Swiss-Prot (Q9P2R3.2);
Region: ANK 14"
misc_feature 2547..2636
/gene="ANKFY1"
/gene_synonym="ANKHZN; BTBD23; ZFYVE14"
/experiment="experimental evidence, no additional details
recorded"
/note="propagated from UniProtKB/Swiss-Prot (Q9P2R3.2);
Region: ANK 15"
misc_feature 2637..3017
/gene="ANKFY1"
/gene_synonym="ANKHZN; BTBD23; ZFYVE14"
/note="ankyrin repeats; ankyrin repeats mediate
protein-protein interactions in very diverse families of
proteins. The number of ANK repeats in a protein can range
from 2 to over 20 (ankyrins, for example). ANK repeats may
occur in combinations with other...; Region: ANK; cd00204"
/db_xref="CDD:29261"
misc_feature 2649..2738
/gene="ANKFY1"
/gene_synonym="ANKHZN; BTBD23; ZFYVE14"
/experiment="experimental evidence, no additional details
recorded"
/note="propagated from UniProtKB/Swiss-Prot (Q9P2R3.2);
Region: ANK 16"
misc_feature 2664..2948
/gene="ANKFY1"
/gene_synonym="ANKHZN; BTBD23; ZFYVE14"
/note="Ankyrin repeats (3 copies); Region: Ank_2;
pfam12796"
/db_xref="CDD:205076"
misc_feature 2754..2843
/gene="ANKFY1"
/gene_synonym="ANKHZN; BTBD23; ZFYVE14"
/experiment="experimental evidence, no additional details
recorded"
/note="propagated from UniProtKB/Swiss-Prot (Q9P2R3.2);
Region: ANK 17"
misc_feature 2838..3233
/gene="ANKFY1"
/gene_synonym="ANKHZN; BTBD23; ZFYVE14"
/note="ankyrin repeats; ankyrin repeats mediate
protein-protein interactions in very diverse families of
proteins. The number of ANK repeats in a protein can range
from 2 to over 20 (ankyrins, for example). ANK repeats may
occur in combinations with other...; Region: ANK; cd00204"
/db_xref="CDD:29261"
misc_feature 2853..2942
/gene="ANKFY1"
/gene_synonym="ANKHZN; BTBD23; ZFYVE14"
/experiment="experimental evidence, no additional details
recorded"
/note="propagated from UniProtKB/Swiss-Prot (Q9P2R3.2);
Region: ANK 18"
misc_feature 2913..3077
/gene="ANKFY1"
/gene_synonym="ANKHZN; BTBD23; ZFYVE14"
/note="Ankyrin repeats (many copies); Region: Ank_5;
pfam13857"
/db_xref="CDD:206028"
misc_feature 2952..3044
/gene="ANKFY1"
/gene_synonym="ANKHZN; BTBD23; ZFYVE14"
/experiment="experimental evidence, no additional details
recorded"
/note="propagated from UniProtKB/Swiss-Prot (Q9P2R3.2);
Region: ANK 19"
misc_feature 3054..3152
/gene="ANKFY1"
/gene_synonym="ANKHZN; BTBD23; ZFYVE14"
/experiment="experimental evidence, no additional details
recorded"
/note="propagated from UniProtKB/Swiss-Prot (Q9P2R3.2);
Region: ANK 20"
misc_feature 3168..3257
/gene="ANKFY1"
/gene_synonym="ANKHZN; BTBD23; ZFYVE14"
/experiment="experimental evidence, no additional details
recorded"
/note="propagated from UniProtKB/Swiss-Prot (Q9P2R3.2);
Region: ANK 21"
misc_feature 3345..3530
/gene="ANKFY1"
/gene_synonym="ANKHZN; BTBD23; ZFYVE14"
/note="Protein present in Fab1, YOTB, Vac1, and EEA1;
Region: FYVE; smart00064"
/db_xref="CDD:197498"
misc_feature 3357..3524
/gene="ANKFY1"
/gene_synonym="ANKHZN; BTBD23; ZFYVE14"
/note="FYVE domain; Zinc-binding domain; targets proteins
to membrane lipids via interaction with
phosphatidylinositol-3-phosphate, PI3P; present in Fab1,
YOTB, Vac1, and EEA1; Region: FYVE; cd00065"
/db_xref="CDD:28947"
misc_feature order(3369..3371,3378..3380,3417..3419,3426..3428,
3441..3443,3450..3452,3507..3509,3516..3518)
/gene="ANKFY1"
/gene_synonym="ANKHZN; BTBD23; ZFYVE14"
/note="Zn binding sites [ion binding]; other site"
/db_xref="CDD:28947"
misc_feature order(3405..3422,3435..3437,3501..3503)
/gene="ANKFY1"
/gene_synonym="ANKHZN; BTBD23; ZFYVE14"
/note="phosphatidylinositol 3-phosphate binding site
[chemical binding]; other site"
/db_xref="CDD:28947"
exon 49..241
/gene="ANKFY1"
/gene_synonym="ANKHZN; BTBD23; ZFYVE14"
/inference="alignment:Splign:1.39.8"
exon 242..360
/gene="ANKFY1"
/gene_synonym="ANKHZN; BTBD23; ZFYVE14"
/inference="alignment:Splign:1.39.8"
exon 361..496
/gene="ANKFY1"
/gene_synonym="ANKHZN; BTBD23; ZFYVE14"
/inference="alignment:Splign:1.39.8"
exon 497..620
/gene="ANKFY1"
/gene_synonym="ANKHZN; BTBD23; ZFYVE14"
/inference="alignment:Splign:1.39.8"
exon 621..770
/gene="ANKFY1"
/gene_synonym="ANKHZN; BTBD23; ZFYVE14"
/inference="alignment:Splign:1.39.8"
exon 771..936
/gene="ANKFY1"
/gene_synonym="ANKHZN; BTBD23; ZFYVE14"
/inference="alignment:Splign:1.39.8"
variation 800
/gene="ANKFY1"
/gene_synonym="ANKHZN; BTBD23; ZFYVE14"
/replace="c"
/replace="t"
/db_xref="dbSNP:369749781"
variation 830
/gene="ANKFY1"
/gene_synonym="ANKHZN; BTBD23; ZFYVE14"
/replace="c"
/replace="t"
/db_xref="dbSNP:3744671"
exon 937..1141
/gene="ANKFY1"
/gene_synonym="ANKHZN; BTBD23; ZFYVE14"
/inference="alignment:Splign:1.39.8"
exon 1142..1210
/gene="ANKFY1"
/gene_synonym="ANKHZN; BTBD23; ZFYVE14"
/inference="alignment:Splign:1.39.8"
exon 1211..1410
/gene="ANKFY1"
/gene_synonym="ANKHZN; BTBD23; ZFYVE14"
/inference="alignment:Splign:1.39.8"
exon 1411..1508
/gene="ANKFY1"
/gene_synonym="ANKHZN; BTBD23; ZFYVE14"
/inference="alignment:Splign:1.39.8"
exon 1509..1737
/gene="ANKFY1"
/gene_synonym="ANKHZN; BTBD23; ZFYVE14"
/inference="alignment:Splign:1.39.8"
variation 1559
/gene="ANKFY1"
/gene_synonym="ANKHZN; BTBD23; ZFYVE14"
/replace="a"
/replace="g"
/db_xref="dbSNP:2020118"
variation 1676
/gene="ANKFY1"
/gene_synonym="ANKHZN; BTBD23; ZFYVE14"
/replace="a"
/replace="t"
/db_xref="dbSNP:1973059"
exon 1738..1836
/gene="ANKFY1"
/gene_synonym="ANKHZN; BTBD23; ZFYVE14"
/inference="alignment:Splign:1.39.8"
exon 1837..1990
/gene="ANKFY1"
/gene_synonym="ANKHZN; BTBD23; ZFYVE14"
/inference="alignment:Splign:1.39.8"
exon 1991..2162
/gene="ANKFY1"
/gene_synonym="ANKHZN; BTBD23; ZFYVE14"
/inference="alignment:Splign:1.39.8"
exon 2163..2281
/gene="ANKFY1"
/gene_synonym="ANKHZN; BTBD23; ZFYVE14"
/inference="alignment:Splign:1.39.8"
exon 2282..2438
/gene="ANKFY1"
/gene_synonym="ANKHZN; BTBD23; ZFYVE14"
/inference="alignment:Splign:1.39.8"
exon 2439..2639
/gene="ANKFY1"
/gene_synonym="ANKHZN; BTBD23; ZFYVE14"
/inference="alignment:Splign:1.39.8"
exon 2640..2816
/gene="ANKFY1"
/gene_synonym="ANKHZN; BTBD23; ZFYVE14"
/inference="alignment:Splign:1.39.8"
exon 2817..2964
/gene="ANKFY1"
/gene_synonym="ANKHZN; BTBD23; ZFYVE14"
/inference="alignment:Splign:1.39.8"
exon 2965..3055
/gene="ANKFY1"
/gene_synonym="ANKHZN; BTBD23; ZFYVE14"
/inference="alignment:Splign:1.39.8"
exon 3056..3180
/gene="ANKFY1"
/gene_synonym="ANKHZN; BTBD23; ZFYVE14"
/inference="alignment:Splign:1.39.8"
exon 3181..3327
/gene="ANKFY1"
/gene_synonym="ANKHZN; BTBD23; ZFYVE14"
/inference="alignment:Splign:1.39.8"
exon 3328..3418
/gene="ANKFY1"
/gene_synonym="ANKHZN; BTBD23; ZFYVE14"
/inference="alignment:Splign:1.39.8"
exon 3419..7959
/gene="ANKFY1"
/gene_synonym="ANKHZN; BTBD23; ZFYVE14"
/inference="alignment:Splign:1.39.8"
STS 4394..4504
/gene="ANKFY1"
/gene_synonym="ANKHZN; BTBD23; ZFYVE14"
/standard_name="G54294"
/db_xref="UniSTS:116130"
variation 4609
/gene="ANKFY1"
/gene_synonym="ANKHZN; BTBD23; ZFYVE14"
/replace="c"
/replace="t"
/db_xref="dbSNP:1045016"
STS 4884..5065
/gene="ANKFY1"
/gene_synonym="ANKHZN; BTBD23; ZFYVE14"
/standard_name="RH103073"
/db_xref="UniSTS:97407"
variation 4889
/gene="ANKFY1"
/gene_synonym="ANKHZN; BTBD23; ZFYVE14"
/replace="g"
/replace="t"
/db_xref="dbSNP:3760471"
variation 6765
/gene="ANKFY1"
/gene_synonym="ANKHZN; BTBD23; ZFYVE14"
/replace=""
/replace="a"
/db_xref="dbSNP:3840875"
variation 7072
/gene="ANKFY1"
/gene_synonym="ANKHZN; BTBD23; ZFYVE14"
/replace="a"
/replace="g"
/db_xref="dbSNP:1043587"
variation 7309
/gene="ANKFY1"
/gene_synonym="ANKHZN; BTBD23; ZFYVE14"
/replace="c"
/replace="t"
/db_xref="dbSNP:1043592"
STS 7369..7493
/gene="ANKFY1"
/gene_synonym="ANKHZN; BTBD23; ZFYVE14"
/standard_name="SHGC-36655"
/db_xref="UniSTS:81079"
ORIGIN
gcacttctcgcgaggttgcaggcagtgccgggccagacatggcggaagaggaggtggccaagttggagaagcacttgatgcttctgcggcaggagtatgtcaagctgcagaagaagctggcggagacagagaagcgctgcgctctcttggctgcgcaggcaaacaaggagagcagcagcgagtccttcatcagccgtctgctggccatcgtggcagacctctacgagcaggagcagtacagcgatctgaagataaaggttggggacaggcacatcagtgctcacaagtttgtcctggcagcccgcagtgacagctggagtctggctaacttgtcttccactaaagagttggacctgtcagatgctaatcctgaggtgacgatgacaatgcttcgctggatctatacagatgagctggagttcagagaggatgatgtgttcctgactgaactgatgaaactagcaaatcggtttcagctacagctcctcagggagagatgtgagaagggtgttatgtctctagtgaatgtcaggaactgtattcgcttctaccagacggcagaggagctgaatgccagcacactgatgaactactgtgcagaaattattgcaagtcattgggacgacctgaggaaggaggatttcagcagcatgagcgctcagttgttatacaaaatgatcaaatccaagacagagtacccgctacataaagccatcaaagtggagagagaagacgtggtcttcctgtatctgattgaaatggattcccagctccctgggaagctgaatgaagcggatcataacggagatctggcattagatctagccctctcacgacgactggagagtattgccaccacgctggttagtcacaaagctgatgtggacatggtggacaagagtggctggagcttgttacacaaaggaatccaaagaggagatctctttgctgccactttcctcattaagaatggggcctttgtcaacgctgctacactgggtgcccaggagacaccactgcaccttgtggccttgtacagttcaaagaaacactcagcagatgtgatgtctgagatggcgcagattgcagaggcccttctgcaggctggtgccaaccccaacatgcaggacagcaaggggaggactcctttacatgtgtccatcatggccgggaatgaatatgtgttcagtcagctgctgcagtgcaaacaactagatttagaactcaaagaccacgagggcagcacggctctgtggctggcagtgcagcatatcacagtgtcttctgaccagtctgtgaaccccttcgaagatgtccccgtggtaaatgggacttcatttgatgagaacagctttgcagccagactcatccagcgcggcagccacacagacgcacctgacacggcgacaggaaactgtttactacagcgggcagctggagcaggaaacgaggcagcagctcttttcctggcaaccaacggtgcccatgtcaaccacagaaacaagtggggagaaaccccgttgcacacagcgtgtcggcatggcctggccaacctcacggcagagctcctgcagcaaggcgccaacccaaacctgcagacggaggaagctctgcctctgccaaaggaggccgcatccctgaccagcttggcggacagcgtccatctgcagacgccactgcacatggcgatcgcctataaccatccggatgtggtgtctgtcatcctggagcagaaagccaatgctcttcatgccaccaacaacttgcagatcattccggacttcagcctcaaagattcccgagaccagactgtgctgggcctggcattatggactggcatgcacacgatcgcagcccagctgctgggctctggagccgccatcaatgacaccatgtcggatgggcagacgctactgcacatggccatacagcggcaggacagcaagagcgcactcttcctgctggagcaccaggcagatataaatgtcagcaggactcaggacggggagacagccctccagctggccatcagaaaccagcttccactcgtagttgatgccatatgcacccgaggagctgacatgtctgtgccagatgagaaggggaaccccccgctgtggcttgcattggcaaacaatctggaggacatcgcatccactctggtcagacatggctgtgatgccacatgctggggtccgggacctggtgggtgccttcagacgctcctgcacagagccattgatgaaaacaacgagcccaccgcctgctttcttattcgcagtggctgtgacgtgaacagtcccagacaaccaggcgccaatggagaaggagaggaagaggctagagatgggcagacccctttgcatttggcagcctcttgggggctggaagagacagtacagtgtcttctggagtttggtgccaacgtgaacgcacaggatgcagaaggaagaacccccatccacgtggccatcagcagccaacacggtgtcatcattcagctgttggtttctcaccccgatatccatttgaatgtacgagacagacaagggctgaccccgtttgcctgtgccatgactttcaagaacaacaagtcagccgaggccattctcaaacgagagtccggggctgctgagcaggtggataacaagggccggaatttccttcatgtggcagttcagaactctgatattgaaagtgtgctgttcctgatcagtgtccacgctaatgtgaattcaagagtccaggatgcctccaagttgacccccctgcacctcgctgtccaagcaggctcagaaattattgtccgcaatttgcttcttgcgggagccaaagtgaacgaattaaccaagcatcgccagactgccctccatcttgctgcccagcaggacctgcccaccatctgctcagtcctcctagagaatggcgtggactttgctgccgtggatgagaatggaaacaatgctcttcatcttgctgtcatgcacggccggctcaacaacatccgggttctcctgacagagtgcacagtggacgccgaagcctttaatctcagaggccagtcaccactgcacattttgggacaatatggcaaggagaatgcagcggccatctttgatctcttcctagaatgcatgccggggtatcctctggacaagccggatgcagacggcagcacggtgctgctcctggcatacatgaaagggaacgccaacttgtgccgcgccatcgtccggtcgggggctcgcctcggggtgaataacaaccagggagtcaacatcttcaactaccaggtcgccaccaagcagctcctgttccgactgctggatatgctgtccaaggagcctccgtggtgtgacggctcctactgctatgagtgcactgccaggttcggagtcaccactcgcaaacaccactgtcgtcactgcggacgtcttctttgccataaatgctcgaccaaggagattcctattataaagtttgatctgaacaagcctgtgcgggtttgcaacatttgttttgatgtactgactctgggtggggtttcttagtgagccccccggagggtccaggccacgtccttggtcacctccccagcagctgctctgctcaccagcctgaccccacccagagcaggagctggcgggtgtcttcctgcggcaatagactggaacgattaaggaccatggtgtgatagatcccatttcaaatgattccatatgattgtcagtgtgtgtgtcagactgtgatcgatttcactagatgtctcactcatcagaccaggccattgggcctaagtggtaaatgtgattaggaattagacctctccccattctgctagcaacatacagggacacttggaaaaccatttccccttccagtagcttggtgtccatcccagagcattcatgaagtcttcccgcctgggctgactgatgaggcagagcctctcagcgtaggaagctggctgcttaatgagctggctttactctagggtaagtggctgtggacttttctgcacagtgttttcataaagataataggatcctcttgccctgaagtctttttttctttttacgctaagctgtatttttagtgagctaccccttttaaaaaggtgaaatctttcttaacagggttcaaagatgagagctgaaaaatcgtggccttaacaactgaaagctttacagtgttcatgctactgaggtgtcaggagtgcagctgggccgcttgacacctcgtagcagccgtctcattctctcgtcttgctgcgtcctgtctgtggagtcctcagtcactctgctgttggagagtgctggaggaaatgcacttttactgtgctgcactttttatagagctgcattgtcggtgattccaatttaaaaatccatattcaaaaataccctcacacatccctgcatcagtgattctaatgatcagctttgactggacctcagctcacacgaatctccaaggaaaaactctacagagcatcttttagagcaagagattcatacaggccaagtgatgagagggggagtcaccaaggcttcagccccaagggcatctccagcctcaggccggcaggtcctatgtccttgacacaaatgcttcttgctgaaatcctccctagtgatgctgcgagtgctgttggtcccagttctgtgtagcttgccctgccccatgaagggccaccagccaagggccctggccacgtgtgcgccaccttactttggaagtctctggcttgtgtgctggatgaggctgccagaacttgttgggcgttcatcgctgttagtacatatattaaccgtgaggtgttaaacttttcttttgaaggtttggccagtttctaaaaaatgcacatttaaagagaagcatctaccacggctttaaaacaaaacaactctgagatgaacaatatgtgttatactcagagattaacaatctcaatcatacatactgattctttcagacatttaataaccactacatttttttgcattaatgaagtttgactatatgtgtaaagggactaaatatttttgcaacagcctgttctttgttcattcttttctggatagtgtgtcctctgtattgcggtagatttatacattctgttgcctaaatatgtgtgtaaaatgagctgataaactggagtactacttaaaaaaaagtctgtgatttataagatgtatatgctttctatgtgaatataagcttgtgcacaatgtttaaaagaaaaacaatgaattagaagagatcccccgtcccccagtctgacatatttcatacagaatgtttaaaagaaaaactctgctagtcttggcaaacatttggccatgtgaggcatgtggtcagtttccattttctattacctggaaagggccataaggaagcaggcagggcttaggtagcttggttacctaagttagaaagtaagagaatcatgattcggatatgaattgaagtggttggtacatggatacctgttctttaaaaggaatgtgggagatgagtcaagggtgaggccgattgttctgcccatgccctaccataccaatttcaataacaatcttgcctgtcattgcactcagaatcttaagatcatgtttcaaatatgttgattcaaacttgcttctaagcctgagtccagggatagcaatggtactgaccagctatggactgggagaacattgagtcctgttttccattggcttcagggcgcatccatgtggatataggaaaagcctctttccacagacttaggaagccccccgaccacgcggacgctcgctgggctgcactcagcaggctgcttgagtgggagctgactccaacatgccctgccctggctgggactaggcatgcttccagcccttcccgtgctctccctgctgtcaacacttgcgtacaaacctgcctagctgttgtaagttttcatcagtagcttaagtactagtagcaaaaacttaaattcattcagaaagttgccacttctgaatgagtagagcaggaaaagtaaactttactgaaacataatttgctgcaacagtcaacattgttatgctgaatgtgctctcaactgccctttgctcatcgccagatttattatccagtgtattcctaacagtcttttgttgtcgttgtttttaaaacaaaggtacggaccatgtgctatatataaatcgaatggcttaaactaatttgctatgatcctctaacaccgaaatttcccataaacttaagtgcctacacttaggacttttgaactttcagtcatctttttcgtggtgtctcactgaacgatgtgttagaacatgtgttccatttggagttttgggcctgtgcacggtcaaccccaattaccaatttagttgaggctggattcgattgctcagttcacctgccacgttctctccaaggagtggggtctacgtgacctttagtcctctacctcagagccccgagtcatttctgaccaccccgttctgtgtcctcactcttgtccctgaatgggtccctgtgtggatctcagtgtgtgtgtggtttctccactcctccccgctcatgtcccacacctgccatattgaaccgtttctgcactaatcttctccacgggcacggagtggagggaacgtcttgggaaaggggagagcttgacctccatctaggtttcttttatctggagaaaaagaacacttttgaactatgtaatgcttcaccctgaaaggcaagctaacgctaacttcccaggtgacagtagcaggaacaaggaagggtaatgtttccatgacagacacttgcttcccttgggacaagtcccagaagaactacctgaagcaccaaagctccccaccccagcctggtggcagaggaagcaggtggcaccaactcaccaaagggacttgggagccaccttctcactctgtggaagtactttagtgagagctgactggcaagataaaaaccctgaaattcccagaagttacagatgccttaaagactttctttggaagatcattgcctgtactattccttttttgtgtggcataaataatatattaacctgttacaactgacaacattggttttctgcagctagggagtcttgagtcgagactgctcgccttgatgacttgctcttttttggcagatgtgtggagttggctgttacgacatccctgtgtgatcccagaggaggggcagtagctgggcagaaactgcaggcacacatttgggtggatcacctggcttccagccccttcggggtggtgctcagtgtggggtgatggtatcatagaggaccacggcgcttatcagcattgtttctttggagtctgtgtaatggaatgtatttttcaaatactgatatttgcattttctgtaacaattccttataataaaatgaagtaaaattgtgcatttaaagtggaaactttaataagacatttgtagttacttctaatgcagaagtaccaataagcattaaaaacaaattttagaaaactcctgacgtgaataagtttcttgaccagctgccctccagaaagtttgaattccaacatttttcaggaacatgctgttgacagcagtaaaagtagctattttatgtatgtatttttaatttttaaaagtttcagtaggtttttggggttcaggtggtgtttggttacgtgaggttctttagcggtgatttccaggattttggggcacccatcacccaagcagtgtacactggacccttttatccctcaccccaaccctttcccctgagcccccaaagtccactgtatcattcttaatgcctttacgtcctcatggcttagctcccgaaaagtagttattttaaacatactagctgcctgaacttactgtgcccttggcccagatttcagctcatagcaccgagcgtgatcactgaggcagtctcagtcaccgtcacctgacccctctgaa
//
ANNOTATIONS from NCBI Entrez Gene (20130726):
GeneID:51479 -> Molecular function: GO:0005515 [protein binding] evidence: IPI
GeneID:51479 -> Molecular function: GO:0046872 [metal ion binding] evidence: IEA
GeneID:51479 -> Cellular component: GO:0010008 [endosome membrane] evidence: ISS
GeneID:51479 -> Cellular component: GO:0043231 [intracellular membrane-bounded organelle] evidence: IDA
by
@meso_cacase at
DBCLS
This page is licensed under a Creative Commons Attribution 2.1 Japan License.