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2024-04-24 07:23:34, GGRNA : RefSeq release 60 (20130726)
LOCUS NM_001265610 3260 bp mRNA linear PRI 20-APR-2013
DEFINITION Homo sapiens trafficking protein, kinesin binding 1 (TRAK1),
transcript variant 5, mRNA.
ACCESSION NM_001265610
VERSION NM_001265610.1 GI:388490363
KEYWORDS RefSeq.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3260)
AUTHORS van Spronsen,M., Mikhaylova,M., Lipka,J., Schlager,M.A., van den
Heuvel,D.J., Kuijpers,M., Wulf,P.S., Keijzer,N., Demmers,J.,
Kapitein,L.C., Jaarsma,D., Gerritsen,H.C., Akhmanova,A. and
Hoogenraad,C.C.
TITLE TRAK/Milton motor-adaptor proteins steer mitochondrial trafficking
to axons and dendrites
JOURNAL Neuron 77 (3), 485-502 (2013)
PUBMED 23395375
REMARK GeneRIF: The results of this study established a key role for
mammalian TRAK1 proteins in axonal and dendritic targeting of
mitochondria.
REFERENCE 2 (bases 1 to 3260)
AUTHORS Fox,C.S., Liu,Y., White,C.C., Feitosa,M., Smith,A.V.,
Heard-Costa,N., Lohman,K., Johnson,A.D., Foster,M.C.,
Greenawalt,D.M., Griffin,P., Ding,J., Newman,A.B., Tylavsky,F.,
Miljkovic,I., Kritchevsky,S.B., Launer,L., Garcia,M.,
Eiriksdottir,G., Carr,J.J., Gudnason,V., Harris,T.B., Cupples,L.A.
and Borecki,I.B.
CONSRTM GIANT Consortium; MAGIC Consortium; GLGC Consortium
TITLE Genome-wide association for abdominal subcutaneous and visceral
adipose reveals a novel locus for visceral fat in women
JOURNAL PLoS Genet. 8 (5), E1002695 (2012)
PUBMED 22589738
REFERENCE 3 (bases 1 to 3260)
AUTHORS An,Y., Zhou,Y., Ren,G., Tian,Q., Lu,Y., Li,H., Li,K., Su,T., Xu,B.,
Chen,S., Wang,T., Zhang,X., Nie,Y., Wang,X. and Zhao,Q.
TITLE Elevated expression of MGb2-Ag/TRAK1 is correlated with poor
prognosis in patients with colorectal cancer
JOURNAL Int J Colorectal Dis 26 (11), 1397-1404 (2011)
PUBMED 21573901
REMARK GeneRIF: MGb2-Ag/TRAK1 may play an important role in the
development of colorectal cancer (CRC) and may be a valuable
prognostic indicator of CRC.
REFERENCE 4 (bases 1 to 3260)
AUTHORS Xu,B., Roos,J.L., Dexheimer,P., Boone,B., Plummer,B., Levy,S.,
Gogos,J.A. and Karayiorgou,M.
TITLE Exome sequencing supports a de novo mutational paradigm for
schizophrenia
JOURNAL Nat. Genet. 43 (9), 864-868 (2011)
PUBMED 21822266
REMARK Publication Status: Online-Only
REFERENCE 5 (bases 1 to 3260)
AUTHORS Koutsopoulos,O.S., Laine,D., Osellame,L., Chudakov,D.M.,
Parton,R.G., Frazier,A.E. and Ryan,M.T.
TITLE Human Miltons associate with mitochondria and induce
microtubule-dependent remodeling of mitochondrial networks
JOURNAL Biochim. Biophys. Acta 1803 (5), 564-574 (2010)
PUBMED 20230862
REFERENCE 6 (bases 1 to 3260)
AUTHORS Ozyildirim,A.M., Wistow,G.J., Gao,J., Wang,J., Dickinson,D.P.,
Frierson,H.F. Jr. and Laurie,G.W.
TITLE The lacrimal gland transcriptome is an unusually rich source of
rare and poorly characterized gene transcripts
JOURNAL Invest. Ophthalmol. Vis. Sci. 46 (5), 1572-1580 (2005)
PUBMED 15851553
REFERENCE 7 (bases 1 to 3260)
AUTHORS Brickley,K., Smith,M.J., Beck,M. and Stephenson,F.A.
TITLE GRIF-1 and OIP106, members of a novel gene family of coiled-coil
domain proteins: association in vivo and in vitro with kinesin
JOURNAL J. Biol. Chem. 280 (15), 14723-14732 (2005)
PUBMED 15644324
REMARK GeneRIF: GRIF-1 and OIP106 have roles in protein and/or organelle
transport in excitable cells in a manner analogous to glutamate
receptor-interacting-protein 1
REFERENCE 8 (bases 1 to 3260)
AUTHORS Colland,F., Jacq,X., Trouplin,V., Mougin,C., Groizeleau,C.,
Hamburger,A., Meil,A., Wojcik,J., Legrain,P. and Gauthier,J.M.
TITLE Functional proteomics mapping of a human signaling pathway
JOURNAL Genome Res. 14 (7), 1324-1332 (2004)
PUBMED 15231748
REFERENCE 9 (bases 1 to 3260)
AUTHORS Iyer,S.P. and Hart,G.W.
TITLE Roles of the tetratricopeptide repeat domain in O-GlcNAc
transferase targeting and protein substrate specificity
JOURNAL J. Biol. Chem. 278 (27), 24608-24616 (2003)
PUBMED 12724313
REFERENCE 10 (bases 1 to 3260)
AUTHORS Iyer,S.P., Akimoto,Y. and Hart,G.W.
TITLE Identification and cloning of a novel family of coiled-coil domain
proteins that interact with O-GlcNAc transferase
JOURNAL J. Biol. Chem. 278 (7), 5399-5409 (2003)
PUBMED 12435728
COMMENT VALIDATED REFSEQ: This record has undergone validation or
preliminary review. The reference sequence was derived from
DA193280.1, AL713787.1 and AC018358.20.
Transcript Variant: This variant (5) differs in the 5' and 3' UTRs
and initiates translation at an alternate start codon, compared to
variant 1. The encoded isoform (5) is shorter and has distinct N-
and C-termini, compared to isoform 1.
Sequence Note: This RefSeq record was created from transcript and
genomic sequence data to make the sequence consistent with the
reference genome assembly. The genomic coordinates used for the
transcript record were based on transcript alignments.
Publication Note: This RefSeq record includes a subset of the
publications that are available for this gene. Please see the Gene
record to access additional publications.
##Evidence-Data-START##
Transcript exon combination :: AL713787.1 [ECO:0000332]
RNAseq introns :: single sample supports all introns
ERS025082, ERS025084 [ECO:0000348]
##Evidence-Data-END##
COMPLETENESS: complete on the 3' end.
PRIMARY REFSEQ_SPAN PRIMARY_IDENTIFIER PRIMARY_SPAN COMP
1-99 DA193280.1 1-99
100-621 AL713787.1 4-525
622-622 AC018358.20 81771-81771 c
623-1548 AL713787.1 527-1452
1549-3260 AC018358.20 65689-67400 c
FEATURES Location/Qualifiers
source 1..3260
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/chromosome="3"
/map="3p22.1"
gene 1..3260
/gene="TRAK1"
/gene_synonym="MILT1; OIP106"
/note="trafficking protein, kinesin binding 1"
/db_xref="GeneID:22906"
/db_xref="HGNC:29947"
/db_xref="MIM:608112"
exon 1..365
/gene="TRAK1"
/gene_synonym="MILT1; OIP106"
/inference="alignment:Splign:1.39.8"
variation 33
/gene="TRAK1"
/gene_synonym="MILT1; OIP106"
/replace="a"
/replace="g"
/db_xref="dbSNP:146233510"
variation 52
/gene="TRAK1"
/gene_synonym="MILT1; OIP106"
/replace="c"
/replace="t"
/db_xref="dbSNP:186891711"
variation 53
/gene="TRAK1"
/gene_synonym="MILT1; OIP106"
/replace="g"
/replace="t"
/db_xref="dbSNP:376699150"
misc_feature 176..178
/gene="TRAK1"
/gene_synonym="MILT1; OIP106"
/note="upstream in-frame stop codon"
variation 193
/gene="TRAK1"
/gene_synonym="MILT1; OIP106"
/replace="a"
/replace="g"
/db_xref="dbSNP:41286050"
variation 206
/gene="TRAK1"
/gene_synonym="MILT1; OIP106"
/replace="c"
/replace="g"
/db_xref="dbSNP:192013055"
CDS 302..1972
/gene="TRAK1"
/gene_synonym="MILT1; OIP106"
/note="isoform 5 is encoded by transcript variant 5;
OGT(O-Glc-NAc transferase)-interacting protein 106 KDa;
106 kDa O-GlcNAc transferase-interacting protein; milton
homolog 1; O-linked N-acetylglucosamine transferase
interacting protein 106"
/codon_start=1
/product="trafficking kinesin-binding protein 1 isoform 5"
/protein_id="NP_001252539.1"
/db_xref="GI:388490364"
/db_xref="CCDS:CCDS58826.1"
/db_xref="GeneID:22906"
/db_xref="HGNC:29947"
/db_xref="MIM:608112"
/translation="
MQKFIEADYYELDWYYEECSDVLCAERVGQMTKTYNDIDAVTRLLEEKERDLELAARIGQSLLKKNKTLTERNELLEEQVEHIREEVSQLRHELSMKDELLQFYTSAAEESEPESVCSTPLKRNESSSSVQNYFHLDSLQKKLKDLEEENVVLRSEASQLKTETITYEEKEQQLVNDCVKELRDANVQIASISEELAKKTEDAARQQEEITHLLSQIVDLQKKAKACAVENEELVQHLGAAKDAQRQLTAELRELEDKYAECMEMLHEAQEELKNLRNKTMPNTTSRRYHSLGLFPMDSLAAEIEGTMRKELQLEEAESPDITHQKRVFETVRNINQVVKQRSLTPSPMNIPGSNQSSAMNSLLSSCVSTPRSSFYGSDIGNVVLDNKTNSIILETEAADLGNDERSKKPGTPGTPGSHDLETALRRLSLRRENYLSERRFFEEEQERKLQELAEKGELRSGSLTPTESIMSLGTHSRFSEFTGFSGMSFSSRSYLPEKLQIVKPLEGDHAGPRPLSVLLGDSLWSLIHLRKAGHLCHAYSFFFRDSHPRCWFEFL
"
misc_feature 365..1141
/gene="TRAK1"
/gene_synonym="MILT1; OIP106"
/note="HAP1 N-terminal conserved region; Region: HAP1_N;
pfam04849"
/db_xref="CDD:191111"
misc_feature <869..1147
/gene="TRAK1"
/gene_synonym="MILT1; OIP106"
/note="ATP synthase B/B' CF(0); Region: ATP-synt_B;
cl07975"
/db_xref="CDD:212286"
misc_feature 1310..1825
/gene="TRAK1"
/gene_synonym="MILT1; OIP106"
/note="Kinesin associated protein; Region: Milton;
pfam12448"
/db_xref="CDD:152882"
variation 319
/gene="TRAK1"
/gene_synonym="MILT1; OIP106"
/replace="a"
/replace="g"
/db_xref="dbSNP:376792946"
variation 349
/gene="TRAK1"
/gene_synonym="MILT1; OIP106"
/replace="c"
/replace="t"
/db_xref="dbSNP:369295512"
exon 366..442
/gene="TRAK1"
/gene_synonym="MILT1; OIP106"
/inference="alignment:Splign:1.39.8"
variation 412
/gene="TRAK1"
/gene_synonym="MILT1; OIP106"
/replace="c"
/replace="t"
/db_xref="dbSNP:368078209"
variation 419
/gene="TRAK1"
/gene_synonym="MILT1; OIP106"
/replace="a"
/replace="g"
/db_xref="dbSNP:113672596"
exon 443..559
/gene="TRAK1"
/gene_synonym="MILT1; OIP106"
/inference="alignment:Splign:1.39.8"
variation 466
/gene="TRAK1"
/gene_synonym="MILT1; OIP106"
/replace="c"
/replace="t"
/db_xref="dbSNP:377073086"
variation 481
/gene="TRAK1"
/gene_synonym="MILT1; OIP106"
/replace="c"
/replace="g"
/db_xref="dbSNP:138576547"
variation 484
/gene="TRAK1"
/gene_synonym="MILT1; OIP106"
/replace="a"
/replace="g"
/db_xref="dbSNP:141558684"
variation 488
/gene="TRAK1"
/gene_synonym="MILT1; OIP106"
/replace="c"
/replace="t"
/db_xref="dbSNP:369716330"
variation 502
/gene="TRAK1"
/gene_synonym="MILT1; OIP106"
/replace="a"
/replace="g"
/db_xref="dbSNP:145771761"
variation 511
/gene="TRAK1"
/gene_synonym="MILT1; OIP106"
/replace="c"
/replace="t"
/db_xref="dbSNP:11544368"
variation 512
/gene="TRAK1"
/gene_synonym="MILT1; OIP106"
/replace="c"
/replace="g"
/db_xref="dbSNP:376036345"
variation 521
/gene="TRAK1"
/gene_synonym="MILT1; OIP106"
/replace="g"
/replace="t"
/db_xref="dbSNP:373262345"
exon 560..660
/gene="TRAK1"
/gene_synonym="MILT1; OIP106"
/inference="alignment:Splign:1.39.8"
variation 572
/gene="TRAK1"
/gene_synonym="MILT1; OIP106"
/replace="c"
/replace="t"
/db_xref="dbSNP:200488500"
variation 573
/gene="TRAK1"
/gene_synonym="MILT1; OIP106"
/replace="a"
/replace="g"
/db_xref="dbSNP:139582244"
variation 583
/gene="TRAK1"
/gene_synonym="MILT1; OIP106"
/replace="c"
/replace="g"
/db_xref="dbSNP:377117839"
variation 619
/gene="TRAK1"
/gene_synonym="MILT1; OIP106"
/replace="c"
/replace="t"
/db_xref="dbSNP:41289564"
variation 640
/gene="TRAK1"
/gene_synonym="MILT1; OIP106"
/replace="c"
/replace="t"
/db_xref="dbSNP:368331030"
exon 661..769
/gene="TRAK1"
/gene_synonym="MILT1; OIP106"
/inference="alignment:Splign:1.39.8"
variation 699
/gene="TRAK1"
/gene_synonym="MILT1; OIP106"
/replace="a"
/replace="g"
/db_xref="dbSNP:145279682"
variation 707
/gene="TRAK1"
/gene_synonym="MILT1; OIP106"
/replace="c"
/replace="t"
/db_xref="dbSNP:144666749"
variation 710
/gene="TRAK1"
/gene_synonym="MILT1; OIP106"
/replace="g"
/replace="t"
/db_xref="dbSNP:371843104"
variation 766
/gene="TRAK1"
/gene_synonym="MILT1; OIP106"
/replace="c"
/replace="t"
/db_xref="dbSNP:141503991"
exon 770..848
/gene="TRAK1"
/gene_synonym="MILT1; OIP106"
/inference="alignment:Splign:1.39.8"
variation 796
/gene="TRAK1"
/gene_synonym="MILT1; OIP106"
/replace="a"
/replace="c"
/db_xref="dbSNP:375344264"
variation 835
/gene="TRAK1"
/gene_synonym="MILT1; OIP106"
/replace="c"
/replace="t"
/db_xref="dbSNP:151106971"
exon 849..979
/gene="TRAK1"
/gene_synonym="MILT1; OIP106"
/inference="alignment:Splign:1.39.8"
variation 856
/gene="TRAK1"
/gene_synonym="MILT1; OIP106"
/replace="a"
/replace="c"
/db_xref="dbSNP:150238883"
variation 894
/gene="TRAK1"
/gene_synonym="MILT1; OIP106"
/replace="a"
/replace="t"
/db_xref="dbSNP:199959935"
variation 900
/gene="TRAK1"
/gene_synonym="MILT1; OIP106"
/replace="c"
/replace="t"
/db_xref="dbSNP:368794100"
variation 937
/gene="TRAK1"
/gene_synonym="MILT1; OIP106"
/replace="c"
/replace="t"
/db_xref="dbSNP:201576814"
variation 945
/gene="TRAK1"
/gene_synonym="MILT1; OIP106"
/replace="c"
/replace="t"
/db_xref="dbSNP:145303759"
variation 966
/gene="TRAK1"
/gene_synonym="MILT1; OIP106"
/replace="a"
/replace="g"
/db_xref="dbSNP:137886266"
variation 973
/gene="TRAK1"
/gene_synonym="MILT1; OIP106"
/replace="a"
/replace="c"
/db_xref="dbSNP:188394460"
exon 980..1054
/gene="TRAK1"
/gene_synonym="MILT1; OIP106"
/inference="alignment:Splign:1.39.8"
variation 982
/gene="TRAK1"
/gene_synonym="MILT1; OIP106"
/replace="c"
/replace="t"
/db_xref="dbSNP:144162412"
variation 1005
/gene="TRAK1"
/gene_synonym="MILT1; OIP106"
/replace="c"
/replace="t"
/db_xref="dbSNP:376442996"
variation 1009
/gene="TRAK1"
/gene_synonym="MILT1; OIP106"
/replace="a"
/replace="g"
/db_xref="dbSNP:60098029"
variation 1015
/gene="TRAK1"
/gene_synonym="MILT1; OIP106"
/replace="c"
/replace="g"
/db_xref="dbSNP:369469560"
variation 1021
/gene="TRAK1"
/gene_synonym="MILT1; OIP106"
/replace="c"
/replace="t"
/db_xref="dbSNP:201397120"
exon 1055..1192
/gene="TRAK1"
/gene_synonym="MILT1; OIP106"
/inference="alignment:Splign:1.39.8"
variation 1110
/gene="TRAK1"
/gene_synonym="MILT1; OIP106"
/replace="a"
/replace="g"
/db_xref="dbSNP:144731827"
variation 1130
/gene="TRAK1"
/gene_synonym="MILT1; OIP106"
/replace="c"
/replace="t"
/db_xref="dbSNP:370668547"
variation 1152
/gene="TRAK1"
/gene_synonym="MILT1; OIP106"
/replace="c"
/replace="t"
/db_xref="dbSNP:139261502"
variation 1173
/gene="TRAK1"
/gene_synonym="MILT1; OIP106"
/replace="c"
/replace="t"
/db_xref="dbSNP:374334482"
variation 1174
/gene="TRAK1"
/gene_synonym="MILT1; OIP106"
/replace="a"
/replace="g"
/db_xref="dbSNP:9851455"
variation 1190
/gene="TRAK1"
/gene_synonym="MILT1; OIP106"
/replace="a"
/replace="g"
/db_xref="dbSNP:144710739"
exon 1193..1269
/gene="TRAK1"
/gene_synonym="MILT1; OIP106"
/inference="alignment:Splign:1.39.8"
variation 1210
/gene="TRAK1"
/gene_synonym="MILT1; OIP106"
/replace="a"
/replace="g"
/db_xref="dbSNP:376778379"
variation 1227
/gene="TRAK1"
/gene_synonym="MILT1; OIP106"
/replace="g"
/replace="t"
/db_xref="dbSNP:370150047"
variation 1241
/gene="TRAK1"
/gene_synonym="MILT1; OIP106"
/replace="c"
/replace="t"
/db_xref="dbSNP:146849711"
variation 1252
/gene="TRAK1"
/gene_synonym="MILT1; OIP106"
/replace="c"
/replace="t"
/db_xref="dbSNP:140638437"
variation 1253
/gene="TRAK1"
/gene_synonym="MILT1; OIP106"
/replace="a"
/replace="g"
/db_xref="dbSNP:200860677"
variation 1257
/gene="TRAK1"
/gene_synonym="MILT1; OIP106"
/replace="c"
/replace="g"
/db_xref="dbSNP:372269973"
exon 1270..1506
/gene="TRAK1"
/gene_synonym="MILT1; OIP106"
/inference="alignment:Splign:1.39.8"
variation 1281
/gene="TRAK1"
/gene_synonym="MILT1; OIP106"
/replace="a"
/replace="g"
/db_xref="dbSNP:371113304"
variation 1323
/gene="TRAK1"
/gene_synonym="MILT1; OIP106"
/replace="a"
/replace="g"
/db_xref="dbSNP:137919210"
variation 1337
/gene="TRAK1"
/gene_synonym="MILT1; OIP106"
/replace="c"
/replace="t"
/db_xref="dbSNP:374216835"
variation 1357
/gene="TRAK1"
/gene_synonym="MILT1; OIP106"
/replace="c"
/replace="t"
/db_xref="dbSNP:376316651"
variation 1362
/gene="TRAK1"
/gene_synonym="MILT1; OIP106"
/replace="c"
/replace="t"
/db_xref="dbSNP:370414753"
variation 1369
/gene="TRAK1"
/gene_synonym="MILT1; OIP106"
/replace="a"
/replace="g"
/db_xref="dbSNP:201859615"
variation 1374
/gene="TRAK1"
/gene_synonym="MILT1; OIP106"
/replace="c"
/replace="t"
/db_xref="dbSNP:138673537"
variation 1378
/gene="TRAK1"
/gene_synonym="MILT1; OIP106"
/replace="a"
/replace="c"
/db_xref="dbSNP:41289572"
variation 1381
/gene="TRAK1"
/gene_synonym="MILT1; OIP106"
/replace="c"
/replace="g"
/db_xref="dbSNP:71315528"
variation 1402
/gene="TRAK1"
/gene_synonym="MILT1; OIP106"
/replace="c"
/replace="t"
/db_xref="dbSNP:368017667"
variation 1403
/gene="TRAK1"
/gene_synonym="MILT1; OIP106"
/replace="a"
/replace="g"
/db_xref="dbSNP:200470888"
variation 1412
/gene="TRAK1"
/gene_synonym="MILT1; OIP106"
/replace="c"
/replace="t"
/db_xref="dbSNP:148528290"
variation 1429
/gene="TRAK1"
/gene_synonym="MILT1; OIP106"
/replace="c"
/replace="t"
/db_xref="dbSNP:374390537"
variation 1443
/gene="TRAK1"
/gene_synonym="MILT1; OIP106"
/replace="g"
/replace="t"
/db_xref="dbSNP:77593921"
variation 1451
/gene="TRAK1"
/gene_synonym="MILT1; OIP106"
/replace="a"
/replace="g"
/db_xref="dbSNP:368474947"
variation 1456
/gene="TRAK1"
/gene_synonym="MILT1; OIP106"
/replace="c"
/replace="t"
/db_xref="dbSNP:34458401"
variation 1495
/gene="TRAK1"
/gene_synonym="MILT1; OIP106"
/replace="a"
/replace="c"
/db_xref="dbSNP:201574981"
variation 1498
/gene="TRAK1"
/gene_synonym="MILT1; OIP106"
/replace="c"
/replace="t"
/db_xref="dbSNP:143049389"
variation 1499
/gene="TRAK1"
/gene_synonym="MILT1; OIP106"
/replace="a"
/replace="g"
/db_xref="dbSNP:148568284"
variation 1500
/gene="TRAK1"
/gene_synonym="MILT1; OIP106"
/replace="a"
/replace="g"
/db_xref="dbSNP:376148227"
exon 1507..3260
/gene="TRAK1"
/gene_synonym="MILT1; OIP106"
/inference="alignment:Splign:1.39.8"
variation 1518
/gene="TRAK1"
/gene_synonym="MILT1; OIP106"
/replace="g"
/replace="t"
/db_xref="dbSNP:370817285"
variation 1520
/gene="TRAK1"
/gene_synonym="MILT1; OIP106"
/replace="a"
/replace="t"
/db_xref="dbSNP:377190225"
variation 1530
/gene="TRAK1"
/gene_synonym="MILT1; OIP106"
/replace="c"
/replace="t"
/db_xref="dbSNP:138190882"
variation 1534
/gene="TRAK1"
/gene_synonym="MILT1; OIP106"
/replace="g"
/replace="t"
/db_xref="dbSNP:367869302"
variation 1540
/gene="TRAK1"
/gene_synonym="MILT1; OIP106"
/replace="a"
/replace="g"
/db_xref="dbSNP:370176823"
variation 1572
/gene="TRAK1"
/gene_synonym="MILT1; OIP106"
/replace="c"
/replace="t"
/db_xref="dbSNP:143656268"
variation 1594
/gene="TRAK1"
/gene_synonym="MILT1; OIP106"
/replace="c"
/replace="t"
/db_xref="dbSNP:138239150"
variation 1611
/gene="TRAK1"
/gene_synonym="MILT1; OIP106"
/replace="c"
/replace="t"
/db_xref="dbSNP:148722617"
variation 1612
/gene="TRAK1"
/gene_synonym="MILT1; OIP106"
/replace="a"
/replace="g"
/db_xref="dbSNP:201849317"
variation 1628
/gene="TRAK1"
/gene_synonym="MILT1; OIP106"
/replace="a"
/replace="g"
/db_xref="dbSNP:146404227"
variation 1630
/gene="TRAK1"
/gene_synonym="MILT1; OIP106"
/replace="a"
/replace="g"
/db_xref="dbSNP:139748722"
variation 1663
/gene="TRAK1"
/gene_synonym="MILT1; OIP106"
/replace="a"
/replace="g"
/db_xref="dbSNP:369449368"
variation 1673
/gene="TRAK1"
/gene_synonym="MILT1; OIP106"
/replace="a"
/replace="g"
/db_xref="dbSNP:151087421"
variation 1679
/gene="TRAK1"
/gene_synonym="MILT1; OIP106"
/replace="c"
/replace="t"
/db_xref="dbSNP:372408014"
variation 1682
/gene="TRAK1"
/gene_synonym="MILT1; OIP106"
/replace="a"
/replace="g"
/db_xref="dbSNP:372066516"
variation 1684
/gene="TRAK1"
/gene_synonym="MILT1; OIP106"
/replace="c"
/replace="t"
/db_xref="dbSNP:375194394"
variation 1685
/gene="TRAK1"
/gene_synonym="MILT1; OIP106"
/replace="a"
/replace="g"
/db_xref="dbSNP:369505744"
variation 1713
/gene="TRAK1"
/gene_synonym="MILT1; OIP106"
/replace="c"
/replace="t"
/db_xref="dbSNP:199801758"
variation 1715
/gene="TRAK1"
/gene_synonym="MILT1; OIP106"
/replace="a"
/replace="t"
/db_xref="dbSNP:372573676"
variation 1725
/gene="TRAK1"
/gene_synonym="MILT1; OIP106"
/replace="c"
/replace="t"
/db_xref="dbSNP:377046178"
variation 1734
/gene="TRAK1"
/gene_synonym="MILT1; OIP106"
/replace="a"
/replace="g"
/db_xref="dbSNP:149693845"
variation 1748
/gene="TRAK1"
/gene_synonym="MILT1; OIP106"
/replace="a"
/replace="t"
/db_xref="dbSNP:116570962"
variation 1751
/gene="TRAK1"
/gene_synonym="MILT1; OIP106"
/replace="a"
/replace="g"
/db_xref="dbSNP:112579771"
variation 1753
/gene="TRAK1"
/gene_synonym="MILT1; OIP106"
/replace="c"
/replace="t"
/db_xref="dbSNP:146070004"
variation 1763
/gene="TRAK1"
/gene_synonym="MILT1; OIP106"
/replace="a"
/replace="g"
/db_xref="dbSNP:372868771"
variation 1832
/gene="TRAK1"
/gene_synonym="MILT1; OIP106"
/replace="a"
/replace="g"
/db_xref="dbSNP:34248438"
variation 1833
/gene="TRAK1"
/gene_synonym="MILT1; OIP106"
/replace="c"
/replace="t"
/db_xref="dbSNP:201520832"
variation 1834
/gene="TRAK1"
/gene_synonym="MILT1; OIP106"
/replace="g"
/replace="t"
/db_xref="dbSNP:376172950"
variation 1841
/gene="TRAK1"
/gene_synonym="MILT1; OIP106"
/replace="c"
/replace="t"
/db_xref="dbSNP:368165578"
variation 1853
/gene="TRAK1"
/gene_synonym="MILT1; OIP106"
/replace="a"
/replace="g"
/db_xref="dbSNP:372427225"
variation 1867
/gene="TRAK1"
/gene_synonym="MILT1; OIP106"
/replace="c"
/replace="t"
/db_xref="dbSNP:113748092"
variation 1870
/gene="TRAK1"
/gene_synonym="MILT1; OIP106"
/replace="c"
/replace="t"
/db_xref="dbSNP:369613464"
variation 1900
/gene="TRAK1"
/gene_synonym="MILT1; OIP106"
/replace="a"
/replace="g"
/db_xref="dbSNP:9311309"
variation 1935
/gene="TRAK1"
/gene_synonym="MILT1; OIP106"
/replace="a"
/replace="g"
/db_xref="dbSNP:369941061"
variation 1957
/gene="TRAK1"
/gene_synonym="MILT1; OIP106"
/replace="c"
/replace="g"
/db_xref="dbSNP:183752746"
variation 2050
/gene="TRAK1"
/gene_synonym="MILT1; OIP106"
/replace="c"
/replace="t"
/db_xref="dbSNP:76462969"
variation 2198
/gene="TRAK1"
/gene_synonym="MILT1; OIP106"
/replace="a"
/replace="g"
/db_xref="dbSNP:79500038"
variation 2201
/gene="TRAK1"
/gene_synonym="MILT1; OIP106"
/replace="a"
/replace="c"
/replace="g"
/db_xref="dbSNP:9311310"
variation 2237
/gene="TRAK1"
/gene_synonym="MILT1; OIP106"
/replace="a"
/replace="g"
/db_xref="dbSNP:139090851"
variation 2272..2274
/gene="TRAK1"
/gene_synonym="MILT1; OIP106"
/replace=""
/replace="t"
/db_xref="dbSNP:35921270"
variation 2272
/gene="TRAK1"
/gene_synonym="MILT1; OIP106"
/replace="a"
/replace="t"
/db_xref="dbSNP:79408169"
variation 2298
/gene="TRAK1"
/gene_synonym="MILT1; OIP106"
/replace="a"
/replace="g"
/db_xref="dbSNP:149915818"
variation 2380
/gene="TRAK1"
/gene_synonym="MILT1; OIP106"
/replace="c"
/replace="t"
/db_xref="dbSNP:79948485"
variation 2399
/gene="TRAK1"
/gene_synonym="MILT1; OIP106"
/replace="a"
/replace="t"
/db_xref="dbSNP:188179659"
variation 2407
/gene="TRAK1"
/gene_synonym="MILT1; OIP106"
/replace="a"
/replace="g"
/db_xref="dbSNP:193260353"
variation 2525
/gene="TRAK1"
/gene_synonym="MILT1; OIP106"
/replace="a"
/replace="g"
/db_xref="dbSNP:115650099"
variation 2535
/gene="TRAK1"
/gene_synonym="MILT1; OIP106"
/replace="c"
/replace="t"
/db_xref="dbSNP:9829097"
variation 2566..2567
/gene="TRAK1"
/gene_synonym="MILT1; OIP106"
/replace=""
/replace="tt"
/db_xref="dbSNP:145667231"
variation 2566
/gene="TRAK1"
/gene_synonym="MILT1; OIP106"
/replace=""
/replace="t"
/replace="ttt"
/replace="tttt"
/db_xref="dbSNP:34602604"
variation 2576
/gene="TRAK1"
/gene_synonym="MILT1; OIP106"
/replace=""
/replace="tt"
/replace="ttt"
/db_xref="dbSNP:66997507"
variation 2577
/gene="TRAK1"
/gene_synonym="MILT1; OIP106"
/replace=""
/replace="tt"
/replace="tttt"
/db_xref="dbSNP:67007447"
variation 2584
/gene="TRAK1"
/gene_synonym="MILT1; OIP106"
/replace=""
/replace="aa"
/replace="aaa"
/db_xref="dbSNP:71078425"
variation 2586
/gene="TRAK1"
/gene_synonym="MILT1; OIP106"
/replace=""
/replace="ttt"
/db_xref="dbSNP:60498260"
variation 2588..2592
/gene="TRAK1"
/gene_synonym="MILT1; OIP106"
/replace=""
/replace="attta"
/db_xref="dbSNP:74935366"
variation 2677
/gene="TRAK1"
/gene_synonym="MILT1; OIP106"
/replace="g"
/replace="t"
/db_xref="dbSNP:375797814"
variation 2703
/gene="TRAK1"
/gene_synonym="MILT1; OIP106"
/replace="a"
/replace="g"
/db_xref="dbSNP:56347833"
variation 2718
/gene="TRAK1"
/gene_synonym="MILT1; OIP106"
/replace="c"
/replace="t"
/db_xref="dbSNP:144939326"
variation 2734
/gene="TRAK1"
/gene_synonym="MILT1; OIP106"
/replace="c"
/replace="t"
/db_xref="dbSNP:73831718"
variation 2837
/gene="TRAK1"
/gene_synonym="MILT1; OIP106"
/replace=""
/replace="c"
/db_xref="dbSNP:59419342"
variation 2842
/gene="TRAK1"
/gene_synonym="MILT1; OIP106"
/replace="a"
/replace="c"
/db_xref="dbSNP:200762079"
variation 2857
/gene="TRAK1"
/gene_synonym="MILT1; OIP106"
/replace="a"
/replace="g"
/db_xref="dbSNP:1129295"
variation 2982
/gene="TRAK1"
/gene_synonym="MILT1; OIP106"
/replace="c"
/replace="t"
/db_xref="dbSNP:149091247"
variation 2996
/gene="TRAK1"
/gene_synonym="MILT1; OIP106"
/replace=""
/replace="c"
/db_xref="dbSNP:11294121"
variation 3001
/gene="TRAK1"
/gene_synonym="MILT1; OIP106"
/replace="a"
/replace="g"
/db_xref="dbSNP:367678182"
variation 3094
/gene="TRAK1"
/gene_synonym="MILT1; OIP106"
/replace="c"
/replace="t"
/db_xref="dbSNP:9853735"
variation 3107..3108
/gene="TRAK1"
/gene_synonym="MILT1; OIP106"
/replace=""
/replace="ta"
/db_xref="dbSNP:371500558"
STS 3114..3238
/gene="TRAK1"
/gene_synonym="MILT1; OIP106"
/standard_name="WI-15128"
/db_xref="UniSTS:81442"
variation 3188
/gene="TRAK1"
/gene_synonym="MILT1; OIP106"
/replace="a"
/replace="g"
/db_xref="dbSNP:377241812"
variation 3246
/gene="TRAK1"
/gene_synonym="MILT1; OIP106"
/replace="a"
/replace="g"
/db_xref="dbSNP:184049215"
ORIGIN
attcagggctgctgtccagtgctgctttattggcagtgctgccagggtctccgttagctctctgcaaattgccttcctttctgctcctcctactccctccttcccccatagaatttttcttttcattgcccactttactgttttggctccagactgtcgttaagaatgtacagcctaattctggtgtgtttcgggatattcttctgtccagtattctggaagggcggggaggcatggcagcgttttacttgacgttgatggtgctgtgaagtccattctttcctctgcaagactactgactatgcagaaatttatcgaagcggattattatgaactagactggtattatgaagaatgctcggatgttttatgtgctgaaagagttggccagatgactaagacatataatgacatagatgctgtcactcggcttcttgaggagaaagagcgggatttagaattggccgctcgcatcggccagtcgttgttgaagaagaacaagaccctaaccgagaggaacgagctgctggaggagcaggtggaacacatcagggaggaggtgtctcagctccggcatgagctgtccatgaaggatgagctgcttcagttctacaccagcgctgcggaggagagtgagcccgagtccgtttgctcaaccccgttgaagaggaatgagtcgtcctcctcagtccagaattactttcatttggattctcttcaaaagaagctgaaagaccttgaagaggagaatgttgtacttcgatccgaggccagccagctgaagacagagaccatcacctatgaggagaaggagcagcagctggtcaatgactgcgtgaaggagctgagggatgccaatgtccagattgctagtatctcagaggaactggccaagaagacggaagatgctgcccgccagcaagaggagatcacacacctgctatcgcaaatagttgatttgcagaaaaaggcaaaagcttgcgcagtggaaaatgaagaacttgtccagcatctgggggctgctaaggatgcccagcggcagctcacagccgagctgcgtgagctggaggacaagtacgcagagtgcatggagatgctgcatgaggcgcaggaggagctgaagaacctccggaacaaaaccatgcccaataccacgtctcggcgctaccactcactgggcctgtttcccatggattccttggcagcagagattgagggaacgatgcgcaaggagctgcagttggaagaggccgagtctccagacatcactcaccagaagcgtgtctttgagacagtaagaaacatcaaccaggttgtcaagcagagatctctgaccccttctcccatgaacatccccggctccaaccagtcctcggccatgaactccctcctgtccagctgcgtcagcaccccccggtccagcttctacggcagcgacataggcaacgtcgtcctcgacaacaagaccaacagcatcattctggaaacagaggcagccgacctgggaaacgatgagcggagtaagaagccggggacgccgggcaccccaggctcccacgacctggagacggcgctgaggcggctgtccctgcgccgggagaactacctctcggagaggaggttctttgaggaggagcaagagaggaagctccaggagctggcggagaagggcgagctgcgcagcggctccctcacacccactgagagcatcatgtccctgggcacgcactcccgcttctccgagttcaccggcttctctggcatgtccttcagcagccgctcctacctgcctgagaagctccagatcgtgaagccgctggaaggtgatcacgcggggcctcggcccctctctgtcctcctgggggactccctttggtccctgatccacctgcggaaggcggggcacctctgtcacgcctactcctttttcttccgcgacagccacccgcgctgctggtttgagttcctctgagggtggtgctcagcctaggcctccgtccctcccctctggctggcaggtgtgacaatgcacacataggccatgaaactcgccgaggaaagacaagcatgtgcactgtggtcttctagttctttcctttgcctttagaaccttagaaataaaaacttttgtggcggtagaggcactgctaactgattcaaaaattaattaggttttgcctgtgggtgtgaggaatgcagaaaattaatgctttagcttttctgcagttttggtgtcggggagaggttccaagcaaactctattaaatggggatttttttttccccataaccacctgaatgtgatttgtgggcttatgtgttctgatttgaacttcatatagcaaggttgtggcttttggcagatgcagtatgttctgagcgcggctcctagagtctacaatttggagtccaggaaggggtggctgtggagacaagtgagttttgtacctccgtaagccaccctttttcagggtcagttcatgtgttagtatcaggggcatctcagatgattaaactcatgggaaaaacttcctccttccctctctccctcttgccctcctgcctctttttttttttttttttttttaatttaggcacttataaaatgttttccctctacctgctgctactctgccaagagccaccaagtgcttatatttttcattttttactcctttagtttggaaagccatatacgtttgagaaggtgttttaaaactctgtgttacacttacgatgcaaagccaaatcagaacttctgtaaggcagaactttcccaactttaaaaaaattattgtcccctctaaggagccttcttagacgttttttcctaatcaccccccaaagacattttaataccacatatatattgtttatgtactatatgtatatacataaacaatacataagcaatacatctgtggtattaaaattaaaaagaatccaattatgtttacctcaaaagaacctgtttttgcttcttgggagcaatattgcccctgtgagactgcatgctataaggtaaggttgtgcttgttaaagacccaagacatgactgggttccacagtctccaaaggaagagggtgggctagtttgtttttattattattttaaaattgtataattggggtctttcttagagttcagaaaaggtatagcttactcttttttaattgtttatttagttgtaagcttggtgattgttttctgatccacattgtgtgtgttcttcaataaaatctttcatttctgcaatttta
//
ANNOTATIONS from NCBI Entrez Gene (20130726):
GeneID:22906 -> Molecular function: GO:0005515 [protein binding] evidence: IPI
GeneID:22906 -> Molecular function: GO:0050811 [GABA receptor binding] evidence: IEA
GeneID:22906 -> Biological process: GO:0006357 [regulation of transcription from RNA polymerase II promoter] evidence: ISS
GeneID:22906 -> Biological process: GO:0006493 [protein O-linked glycosylation] evidence: ISS
GeneID:22906 -> Biological process: GO:0006605 [protein targeting] evidence: ISS
GeneID:22906 -> Biological process: GO:0008333 [endosome to lysosome transport] evidence: IDA
GeneID:22906 -> Cellular component: GO:0005634 [nucleus] evidence: ISS
GeneID:22906 -> Cellular component: GO:0005737 [cytoplasm] evidence: IDA
GeneID:22906 -> Cellular component: GO:0005739 [mitochondrion] evidence: IDA
GeneID:22906 -> Cellular component: GO:0005769 [early endosome] evidence: IDA
by
@meso_cacase at
DBCLS
This page is licensed under a Creative Commons Attribution 2.1 Japan License.