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2024-04-18 10:41:35, GGRNA : RefSeq release 60 (20130726)
LOCUS NM_001100168 3451 bp mRNA linear PRI 15-JUL-2013
DEFINITION Homo sapiens chemokine (C-C motif) receptor 5 (gene/pseudogene)
(CCR5), transcript variant B, mRNA.
ACCESSION NM_001100168
VERSION NM_001100168.1 GI:154091327
KEYWORDS RefSeq.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3451)
AUTHORS Steen,A., Thiele,S., Guo,D., Hansen,L.S., Frimurer,T.M. and
Rosenkilde,M.M.
TITLE Biased and constitutive signaling in the CC-chemokine receptor CCR5
by manipulating the interface between transmembrane helices 6 and 7
JOURNAL J. Biol. Chem. 288 (18), 12511-12521 (2013)
PUBMED 23493400
REMARK GeneRIF: These results provide important information on the
molecular interplay and impact of TM6 and TM7 for CCR5 activity,
which may be extrapolated to other chemokine receptors and possibly
to other 7TM receptors.
REFERENCE 2 (bases 1 to 3451)
AUTHORS Schnur,E., Kessler,N., Zherdev,Y., Noah,E., Scherf,T., Ding,F.X.,
Rabinovich,S., Arshava,B., Kurbatska,V., Leonciks,A., Tsimanis,A.,
Rosen,O., Naider,F. and Anglister,J.
TITLE NMR mapping of RANTES surfaces interacting with CCR5 using linked
extracellular domains
JOURNAL FEBS J. 280 (9), 2068-2084 (2013)
PUBMED 23480650
REMARK GeneRIF: N-terminal-CCR5 and extracellular loop 2 are the major
contributors to CCR5 binding to RANTES.
REFERENCE 3 (bases 1 to 3451)
AUTHORS Bjorkander,S., Heidari-Hamedani,G., Bremme,K., Gunnarsson,I. and
Holmlund,U.
TITLE Peripheral monocyte expression of the chemokine receptors CCR2,
CCR5 and CXCR3 is altered at parturition in healthy women and in
women with systemic lupus erythematosus
JOURNAL Scand. J. Immunol. 77 (3), 200-212 (2013)
PUBMED 23298254
REMARK GeneRIF: Data indicate that women with systemic lupus erythematosus
(SLE) responded similar to pregnancy as did healthy women with
lower percentages of CCR2+, CCR5+ and CXCR3+ monocytes.
REFERENCE 4 (bases 1 to 3451)
AUTHORS de Voux,A., Chan,M.C., Folefoc,A.T., Madziva,M.T. and Flanagan,C.A.
TITLE Constitutively active CCR5 chemokine receptors differ in mediating
HIV envelope-dependent fusion
JOURNAL PLoS ONE 8 (1), E54532 (2013)
PUBMED 23355876
REMARK GeneRIF: Constitutively active CCR5 chemokine receptors differ in
mediating HIV envelope-dependent fusion.
REFERENCE 5 (bases 1 to 3451)
AUTHORS Ivanoshchuk,D.E., Mikhailova,S.V., Kulikov,I.V., Maksimov,V.N.,
Voevoda,M.I. and Romashchenko,A.G.
TITLE [CCR5, CCR2, apoe, p53, ITGB3 and HFE gene polymorphism in Western
Siberia long-livers]
JOURNAL Adv Gerontol 25 (3), 394-397 (2012)
PUBMED 23289212
REMARK GeneRIF: carriage of the delta32 polymorphism for the CCR5 gene,
does not influence on predisposition to the longevity.
REFERENCE 6 (bases 1 to 3451)
AUTHORS Madsen,H.O., Poulsen,K., Dahl,O., Clark,B.F. and Hjorth,J.P.
TITLE Retropseudogenes constitute the major part of the human elongation
factor 1 alpha gene family
JOURNAL Nucleic Acids Res. 18 (6), 1513-1516 (1990)
PUBMED 2183196
REFERENCE 7 (bases 1 to 3451)
AUTHORS Whiteheart,S.W., Shenbagamurthi,P., Chen,L., Cotter,R.J. and
Hart,G.W.
TITLE Murine elongation factor 1 alpha (EF-1 alpha) is
posttranslationally modified by novel amide-linked
ethanolamine-phosphoglycerol moieties. Addition of
ethanolamine-phosphoglycerol to specific glutamic acid residues on
EF-1 alpha
JOURNAL J. Biol. Chem. 264 (24), 14334-14341 (1989)
PUBMED 2569467
REFERENCE 8 (bases 1 to 3451)
AUTHORS Uetsuki,T., Naito,A., Nagata,S. and Kaziro,Y.
TITLE Isolation and characterization of the human chromosomal gene for
polypeptide chain elongation factor-1 alpha
JOURNAL J. Biol. Chem. 264 (10), 5791-5798 (1989)
PUBMED 2564392
REFERENCE 9 (bases 1 to 3451)
AUTHORS Itoh,H., Toyama,R., Kozasa,T., Tsukamoto,T., Matsuoka,M. and
Kaziro,Y.
TITLE Presence of three distinct molecular species of Gi protein alpha
subunit. Structure of rat cDNAs and human genomic DNAs
JOURNAL J. Biol. Chem. 263 (14), 6656-6664 (1988)
PUBMED 2834384
REFERENCE 10 (bases 1 to 3451)
AUTHORS Ann,D.K., Wu,M.M., Huang,T., Carlson,D.M. and Wu,R.
TITLE Retinol-regulated gene expression in human tracheobronchial
epithelial cells. Enhanced expression of elongation factor EF-1
alpha
JOURNAL J. Biol. Chem. 263 (8), 3546-3549 (1988)
PUBMED 3346208
COMMENT REVIEWED REFSEQ: This record has been curated by NCBI staff. The
reference sequence was derived from AC098613.2, DA818906.1,
U54994.1 and BC038398.1.
Summary: This gene encodes a member of the beta chemokine receptor
family, which is predicted to be a seven transmembrane protein
similar to G protein-coupled receptors. This protein is expressed
by T cells and macrophages, and is known to be an important
co-receptor for macrophage-tropic virus, including HIV, to enter
host cells. Defective alleles of this gene have been associated
with the HIV infection resistance. The ligands of this receptor
include monocyte chemoattractant protein 2 (MCP-2), macrophage
inflammatory protein 1 alpha (MIP-1 alpha), macrophage inflammatory
protein 1 beta (MIP-1 beta) and regulated on activation normal T
expressed and secreted protein (RANTES). Expression of this gene
was also detected in a promyeloblastic cell line, suggesting that
this protein may play a role in granulocyte lineage proliferation
and differentiation. This gene is located at the chemokine receptor
gene cluster region. Two transcript variants encoding the same
protein have been found for this gene. [provided by RefSeq, Jul
2008].
Transcript Variant: This variant (B) differs in the 5' UTR compared
to variant A. Both variants encode the same protein.
Sequence Note: This RefSeq record was created from transcript and
genomic sequence data because no single transcript was available
for the full length of the gene. The extent of this transcript is
supported by published experimental evidence.
Publication Note: This RefSeq record includes a subset of the
publications that are available for this gene. Please see the Gene
record to access additional publications.
##Evidence-Data-START##
CDS exon combination :: U54994.1, BC038398.1 [ECO:0000331]
##Evidence-Data-END##
COMPLETENESS: complete on the 3' end.
PRIMARY REFSEQ_SPAN PRIMARY_IDENTIFIER PRIMARY_SPAN COMP
1-57 AC098613.2 26671-26727
58-532 DA818906.1 82-556
533-2198 U54994.1 465-2130
2199-2899 BC038398.1 2120-2820
2900-3040 U54994.1 2832-2972
3041-3451 BC038398.1 2962-3372
FEATURES Location/Qualifiers
source 1..3451
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/chromosome="3"
/map="3p21.31"
gene 1..3451
/gene="CCR5"
/gene_synonym="CC-CKR-5; CCCKR5; CCR-5; CD195; CKR-5;
CKR5; CMKBR5; IDDM22"
/note="chemokine (C-C motif) receptor 5 (gene/pseudogene)"
/db_xref="GeneID:1234"
/db_xref="HGNC:1606"
/db_xref="MIM:601373"
exon 1..57
/gene="CCR5"
/gene_synonym="CC-CKR-5; CCCKR5; CCR-5; CD195; CKR-5;
CKR5; CMKBR5; IDDM22"
/inference="alignment:Splign:1.39.8"
variation 29
/gene="CCR5"
/gene_synonym="CC-CKR-5; CCCKR5; CCR-5; CD195; CKR-5;
CKR5; CMKBR5; IDDM22"
/replace="a"
/replace="g"
/db_xref="dbSNP:2856758"
variation 43
/gene="CCR5"
/gene_synonym="CC-CKR-5; CCCKR5; CCR-5; CD195; CKR-5;
CKR5; CMKBR5; IDDM22"
/replace="c"
/replace="t"
/db_xref="dbSNP:2856759"
misc_feature 54..56
/gene="CCR5"
/gene_synonym="CC-CKR-5; CCCKR5; CCR-5; CD195; CKR-5;
CKR5; CMKBR5; IDDM22"
/note="upstream in-frame stop codon"
exon 58..111
/gene="CCR5"
/gene_synonym="CC-CKR-5; CCCKR5; CCR-5; CD195; CKR-5;
CKR5; CMKBR5; IDDM22"
/inference="alignment:Splign:1.39.8"
exon 112..3426
/gene="CCR5"
/gene_synonym="CC-CKR-5; CCCKR5; CCR-5; CD195; CKR-5;
CKR5; CMKBR5; IDDM22"
/inference="alignment:Splign:1.39.8"
variation 113
/gene="CCR5"
/gene_synonym="CC-CKR-5; CCCKR5; CCR-5; CD195; CKR-5;
CKR5; CMKBR5; IDDM22"
/replace="c"
/replace="g"
/db_xref="dbSNP:184985767"
CDS 123..1181
/gene="CCR5"
/gene_synonym="CC-CKR-5; CCCKR5; CCR-5; CD195; CKR-5;
CKR5; CMKBR5; IDDM22"
/note="chemr13; C-C motif chemokine receptor 5 A159A;
chemokine receptor CCR5; HIV-1 fusion coreceptor"
/codon_start=1
/product="C-C chemokine receptor type 5"
/protein_id="NP_001093638.1"
/db_xref="GI:154091328"
/db_xref="CCDS:CCDS2739.1"
/db_xref="GeneID:1234"
/db_xref="HGNC:1606"
/db_xref="MIM:601373"
/translation="
MDYQVSSPIYDINYYTSEPCQKINVKQIAARLLPPLYSLVFIFGFVGNMLVILILINCKRLKSMTDIYLLNLAISDLFFLLTVPFWAHYAAAQWDFGNTMCQLLTGLYFIGFFSGIFFIILLTIDRYLAVVHAVFALKARTVTFGVVTSVITWVVAVFASLPGIIFTRSQKEGLHYTCSSHFPYSQYQFWKNFQTLKIVILGLVLPLLVMVICYSGILKTLLRCRNEKKRHRAVRLIFTIMIVYFLFWAPYNIVLLLNTFQEFFGLNNCSSSNRLDQAMQVTETLGMTHCCINPIIYAFVGEKFRNYLLVFFQKHIAKRFCKCCSIFQQEAPERASSVYTRSTGEQEISVGL
"
misc_feature 129..131
/gene="CCR5"
/gene_synonym="CC-CKR-5; CCCKR5; CCR-5; CD195; CKR-5;
CKR5; CMKBR5; IDDM22"
/experiment="experimental evidence, no additional details
recorded"
/note="Sulfotyrosine; propagated from UniProtKB/Swiss-Prot
(P51681.1); sulfatation site"
misc_feature 150..152
/gene="CCR5"
/gene_synonym="CC-CKR-5; CCCKR5; CCR-5; CD195; CKR-5;
CKR5; CMKBR5; IDDM22"
/experiment="experimental evidence, no additional details
recorded"
/note="Sulfotyrosine; propagated from UniProtKB/Swiss-Prot
(P51681.1); sulfatation site"
misc_feature 159..1103
/gene="CCR5"
/gene_synonym="CC-CKR-5; CCCKR5; CCR-5; CD195; CKR-5;
CKR5; CMKBR5; IDDM22"
/note="chemokine receptor-like protein; Provisional;
Region: PHA02834"
/db_xref="CDD:165177"
misc_feature 162..164
/gene="CCR5"
/gene_synonym="CC-CKR-5; CCCKR5; CCR-5; CD195; CKR-5;
CKR5; CMKBR5; IDDM22"
/experiment="experimental evidence, no additional details
recorded"
/note="Sulfotyrosine; propagated from UniProtKB/Swiss-Prot
(P51681.1); sulfatation site"
misc_feature 213..296
/gene="CCR5"
/gene_synonym="CC-CKR-5; CCCKR5; CCR-5; CD195; CKR-5;
CKR5; CMKBR5; IDDM22"
/inference="non-experimental evidence, no additional
details recorded"
/note="propagated from UniProtKB/Swiss-Prot (P51681.1);
transmembrane region"
misc_feature 327..389
/gene="CCR5"
/gene_synonym="CC-CKR-5; CCCKR5; CCR-5; CD195; CKR-5;
CKR5; CMKBR5; IDDM22"
/inference="non-experimental evidence, no additional
details recorded"
/note="propagated from UniProtKB/Swiss-Prot (P51681.1);
transmembrane region"
misc_feature 429..494
/gene="CCR5"
/gene_synonym="CC-CKR-5; CCCKR5; CCR-5; CD195; CKR-5;
CKR5; CMKBR5; IDDM22"
/inference="non-experimental evidence, no additional
details recorded"
/note="propagated from UniProtKB/Swiss-Prot (P51681.1);
transmembrane region"
misc_feature 546..620
/gene="CCR5"
/gene_synonym="CC-CKR-5; CCCKR5; CCR-5; CD195; CKR-5;
CKR5; CMKBR5; IDDM22"
/inference="non-experimental evidence, no additional
details recorded"
/note="propagated from UniProtKB/Swiss-Prot (P51681.1);
transmembrane region"
misc_feature 717..776
/gene="CCR5"
/gene_synonym="CC-CKR-5; CCCKR5; CCR-5; CD195; CKR-5;
CKR5; CMKBR5; IDDM22"
/inference="non-experimental evidence, no additional
details recorded"
/note="propagated from UniProtKB/Swiss-Prot (P51681.1);
transmembrane region"
misc_feature 828..902
/gene="CCR5"
/gene_synonym="CC-CKR-5; CCCKR5; CCR-5; CD195; CKR-5;
CKR5; CMKBR5; IDDM22"
/inference="non-experimental evidence, no additional
details recorded"
/note="propagated from UniProtKB/Swiss-Prot (P51681.1);
transmembrane region"
misc_feature 954..1025
/gene="CCR5"
/gene_synonym="CC-CKR-5; CCCKR5; CCR-5; CD195; CKR-5;
CKR5; CMKBR5; IDDM22"
/inference="non-experimental evidence, no additional
details recorded"
/note="propagated from UniProtKB/Swiss-Prot (P51681.1);
transmembrane region"
misc_feature 1128..1130
/gene="CCR5"
/gene_synonym="CC-CKR-5; CCCKR5; CCR-5; CD195; CKR-5;
CKR5; CMKBR5; IDDM22"
/experiment="experimental evidence, no additional details
recorded"
/note="Phosphoserine, by BARK1; propagated from
UniProtKB/Swiss-Prot (P51681.1); phosphorylation site"
misc_feature 1131..1133
/gene="CCR5"
/gene_synonym="CC-CKR-5; CCCKR5; CCR-5; CD195; CKR-5;
CKR5; CMKBR5; IDDM22"
/experiment="experimental evidence, no additional details
recorded"
/note="Phosphoserine, by BARK1; propagated from
UniProtKB/Swiss-Prot (P51681.1); phosphorylation site"
misc_feature 1146..1148
/gene="CCR5"
/gene_synonym="CC-CKR-5; CCCKR5; CCR-5; CD195; CKR-5;
CKR5; CMKBR5; IDDM22"
/experiment="experimental evidence, no additional details
recorded"
/note="Phosphoserine, by BARK1; propagated from
UniProtKB/Swiss-Prot (P51681.1); phosphorylation site"
misc_feature 1167..1169
/gene="CCR5"
/gene_synonym="CC-CKR-5; CCCKR5; CCR-5; CD195; CKR-5;
CKR5; CMKBR5; IDDM22"
/experiment="experimental evidence, no additional details
recorded"
/note="Phosphoserine, by BARK1; propagated from
UniProtKB/Swiss-Prot (P51681.1); phosphorylation site"
variation 165
/gene="CCR5"
/gene_synonym="CC-CKR-5; CCCKR5; CCR-5; CD195; CKR-5;
CKR5; CMKBR5; IDDM22"
/replace="c"
/replace="t"
/db_xref="dbSNP:200209014"
variation 172
/gene="CCR5"
/gene_synonym="CC-CKR-5; CCCKR5; CCR-5; CD195; CKR-5;
CKR5; CMKBR5; IDDM22"
/replace="a"
/replace="c"
/db_xref="dbSNP:369206494"
variation 174
/gene="CCR5"
/gene_synonym="CC-CKR-5; CCCKR5; CCR-5; CD195; CKR-5;
CKR5; CMKBR5; IDDM22"
/replace="a"
/replace="g"
/db_xref="dbSNP:142904831"
variation 180
/gene="CCR5"
/gene_synonym="CC-CKR-5; CCCKR5; CCR-5; CD195; CKR-5;
CKR5; CMKBR5; IDDM22"
/replace="a"
/replace="t"
/db_xref="dbSNP:145061115"
variation 199
/gene="CCR5"
/gene_synonym="CC-CKR-5; CCCKR5; CCR-5; CD195; CKR-5;
CKR5; CMKBR5; IDDM22"
/replace="a"
/replace="g"
/db_xref="dbSNP:189601230"
variation 207
/gene="CCR5"
/gene_synonym="CC-CKR-5; CCCKR5; CCR-5; CD195; CKR-5;
CKR5; CMKBR5; IDDM22"
/replace="g"
/replace="t"
/db_xref="dbSNP:1800939"
variation 214
/gene="CCR5"
/gene_synonym="CC-CKR-5; CCCKR5; CCR-5; CD195; CKR-5;
CKR5; CMKBR5; IDDM22"
/replace="a"
/replace="g"
/db_xref="dbSNP:56340326"
variation 216
/gene="CCR5"
/gene_synonym="CC-CKR-5; CCCKR5; CCR-5; CD195; CKR-5;
CKR5; CMKBR5; IDDM22"
/replace="c"
/replace="t"
/db_xref="dbSNP:374426321"
variation 227
/gene="CCR5"
/gene_synonym="CC-CKR-5; CCCKR5; CCR-5; CD195; CKR-5;
CKR5; CMKBR5; IDDM22"
/replace="a"
/replace="g"
/db_xref="dbSNP:113471490"
variation 258
/gene="CCR5"
/gene_synonym="CC-CKR-5; CCCKR5; CCR-5; CD195; CKR-5;
CKR5; CMKBR5; IDDM22"
/replace="a"
/replace="g"
/db_xref="dbSNP:41425744"
variation 286
/gene="CCR5"
/gene_synonym="CC-CKR-5; CCCKR5; CCR-5; CD195; CKR-5;
CKR5; CMKBR5; IDDM22"
/replace="a"
/replace="t"
/db_xref="dbSNP:1799863"
variation 287
/gene="CCR5"
/gene_synonym="CC-CKR-5; CCCKR5; CCR-5; CD195; CKR-5;
CKR5; CMKBR5; IDDM22"
/replace="g"
/replace="t"
/db_xref="dbSNP:148106779"
variation 302
/gene="CCR5"
/gene_synonym="CC-CKR-5; CCCKR5; CCR-5; CD195; CKR-5;
CKR5; CMKBR5; IDDM22"
/replace="g"
/replace="t"
/db_xref="dbSNP:1800940"
variation 309
/gene="CCR5"
/gene_synonym="CC-CKR-5; CCCKR5; CCR-5; CD195; CKR-5;
CKR5; CMKBR5; IDDM22"
/replace="a"
/replace="t"
/db_xref="dbSNP:142829420"
variation 322
/gene="CCR5"
/gene_synonym="CC-CKR-5; CCCKR5; CCR-5; CD195; CKR-5;
CKR5; CMKBR5; IDDM22"
/replace="c"
/replace="t"
/db_xref="dbSNP:199722561"
variation 338
/gene="CCR5"
/gene_synonym="CC-CKR-5; CCCKR5; CCR-5; CD195; CKR-5;
CKR5; CMKBR5; IDDM22"
/replace="a"
/replace="g"
/db_xref="dbSNP:143880323"
variation 340
/gene="CCR5"
/gene_synonym="CC-CKR-5; CCCKR5; CCR-5; CD195; CKR-5;
CKR5; CMKBR5; IDDM22"
/replace="c"
/replace="t"
/db_xref="dbSNP:56198941"
variation 347
/gene="CCR5"
/gene_synonym="CC-CKR-5; CCCKR5; CCR-5; CD195; CKR-5;
CKR5; CMKBR5; IDDM22"
/replace="c"
/replace="t"
/db_xref="dbSNP:1800941"
variation 399
/gene="CCR5"
/gene_synonym="CC-CKR-5; CCCKR5; CCR-5; CD195; CKR-5;
CKR5; CMKBR5; IDDM22"
/replace="c"
/replace="g"
/db_xref="dbSNP:376364792"
variation 405
/gene="CCR5"
/gene_synonym="CC-CKR-5; CCCKR5; CCR-5; CD195; CKR-5;
CKR5; CMKBR5; IDDM22"
/replace="a"
/replace="g"
/db_xref="dbSNP:149975182"
variation 425
/gene="CCR5"
/gene_synonym="CC-CKR-5; CCCKR5; CCR-5; CD195; CKR-5;
CKR5; CMKBR5; IDDM22"
/replace="a"
/replace="t"
/db_xref="dbSNP:1800560"
variation 431
/gene="CCR5"
/gene_synonym="CC-CKR-5; CCCKR5; CCR-5; CD195; CKR-5;
CKR5; CMKBR5; IDDM22"
/replace="c"
/replace="g"
/db_xref="dbSNP:56068070"
variation 438
/gene="CCR5"
/gene_synonym="CC-CKR-5; CCCKR5; CCR-5; CD195; CKR-5;
CKR5; CMKBR5; IDDM22"
/replace="a"
/replace="g"
/db_xref="dbSNP:183662584"
variation 441
/gene="CCR5"
/gene_synonym="CC-CKR-5; CCCKR5; CCR-5; CD195; CKR-5;
CKR5; CMKBR5; IDDM22"
/replace="c"
/replace="t"
/db_xref="dbSNP:138174483"
variation 460
/gene="CCR5"
/gene_synonym="CC-CKR-5; CCCKR5; CCR-5; CD195; CKR-5;
CKR5; CMKBR5; IDDM22"
/replace="c"
/replace="t"
/db_xref="dbSNP:200815713"
variation 480
/gene="CCR5"
/gene_synonym="CC-CKR-5; CCCKR5; CCR-5; CD195; CKR-5;
CKR5; CMKBR5; IDDM22"
/replace="a"
/replace="g"
/db_xref="dbSNP:370409212"
variation 482
/gene="CCR5"
/gene_synonym="CC-CKR-5; CCCKR5; CCR-5; CD195; CKR-5;
CKR5; CMKBR5; IDDM22"
/replace="c"
/replace="t"
/db_xref="dbSNP:200108729"
variation 484
/gene="CCR5"
/gene_synonym="CC-CKR-5; CCCKR5; CCR-5; CD195; CKR-5;
CKR5; CMKBR5; IDDM22"
/replace="g"
/replace="t"
/db_xref="dbSNP:150497029"
variation 494
/gene="CCR5"
/gene_synonym="CC-CKR-5; CCCKR5; CCR-5; CD195; CKR-5;
CKR5; CMKBR5; IDDM22"
/replace="c"
/replace="t"
/db_xref="dbSNP:138380934"
variation 495
/gene="CCR5"
/gene_synonym="CC-CKR-5; CCCKR5; CCR-5; CD195; CKR-5;
CKR5; CMKBR5; IDDM22"
/replace="a"
/replace="g"
/db_xref="dbSNP:146209111"
variation 504
/gene="CCR5"
/gene_synonym="CC-CKR-5; CCCKR5; CCR-5; CD195; CKR-5;
CKR5; CMKBR5; IDDM22"
/replace="a"
/replace="c"
/replace="t"
/db_xref="dbSNP:201179081"
variation 513
/gene="CCR5"
/gene_synonym="CC-CKR-5; CCCKR5; CCR-5; CD195; CKR-5;
CKR5; CMKBR5; IDDM22"
/replace="g"
/replace="t"
/db_xref="dbSNP:34418657"
variation 544
/gene="CCR5"
/gene_synonym="CC-CKR-5; CCCKR5; CCR-5; CD195; CKR-5;
CKR5; CMKBR5; IDDM22"
/replace="c"
/replace="t"
/db_xref="dbSNP:371901382"
variation 599
/gene="CCR5"
/gene_synonym="CC-CKR-5; CCCKR5; CCR-5; CD195; CKR-5;
CKR5; CMKBR5; IDDM22"
/replace="a"
/replace="g"
/db_xref="dbSNP:55639502"
variation 614
/gene="CCR5"
/gene_synonym="CC-CKR-5; CCCKR5; CCR-5; CD195; CKR-5;
CKR5; CMKBR5; IDDM22"
/replace="a"
/replace="c"
/replace="g"
/db_xref="dbSNP:1800942"
variation 616
/gene="CCR5"
/gene_synonym="CC-CKR-5; CCCKR5; CCR-5; CD195; CKR-5;
CKR5; CMKBR5; IDDM22"
/replace="c"
/replace="t"
/db_xref="dbSNP:372054532"
variation 628
/gene="CCR5"
/gene_synonym="CC-CKR-5; CCCKR5; CCR-5; CD195; CKR-5;
CKR5; CMKBR5; IDDM22"
/replace="a"
/replace="c"
/db_xref="dbSNP:376687230"
variation 637
/gene="CCR5"
/gene_synonym="CC-CKR-5; CCCKR5; CCR-5; CD195; CKR-5;
CKR5; CMKBR5; IDDM22"
/replace="a"
/replace="c"
/db_xref="dbSNP:377330713"
variation 653
/gene="CCR5"
/gene_synonym="CC-CKR-5; CCCKR5; CCR-5; CD195; CKR-5;
CKR5; CMKBR5; IDDM22"
/replace="c"
/replace="t"
/db_xref="dbSNP:369351284"
variation 654
/gene="CCR5"
/gene_synonym="CC-CKR-5; CCCKR5; CCR-5; CD195; CKR-5;
CKR5; CMKBR5; IDDM22"
/replace="c"
/replace="t"
/db_xref="dbSNP:199824195"
variation 676..707
/gene="CCR5"
/gene_synonym="CC-CKR-5; CCCKR5; CCR-5; CD195; CKR-5;
CKR5; CMKBR5; IDDM22"
/replace=""
/replace="gtcagtatcaattctggaagaatttccagaca"
/db_xref="dbSNP:333"
variation 676
/gene="CCR5"
/gene_synonym="CC-CKR-5; CCCKR5; CCR-5; CD195; CKR-5;
CKR5; CMKBR5; IDDM22"
/replace="g"
/replace="t"
/db_xref="dbSNP:112590754"
variation 677
/gene="CCR5"
/gene_synonym="CC-CKR-5; CCCKR5; CCR-5; CD195; CKR-5;
CKR5; CMKBR5; IDDM22"
/replace="g"
/replace="t"
/db_xref="dbSNP:111718604"
variation 678
/gene="CCR5"
/gene_synonym="CC-CKR-5; CCCKR5; CCR-5; CD195; CKR-5;
CKR5; CMKBR5; IDDM22"
/replace="a"
/replace="c"
/db_xref="dbSNP:113869679"
variation 682
/gene="CCR5"
/gene_synonym="CC-CKR-5; CCCKR5; CCR-5; CD195; CKR-5;
CKR5; CMKBR5; IDDM22"
/replace="a"
/replace="g"
/db_xref="dbSNP:372782701"
variation 690
/gene="CCR5"
/gene_synonym="CC-CKR-5; CCCKR5; CCR-5; CD195; CKR-5;
CKR5; CMKBR5; IDDM22"
/replace="c"
/replace="t"
/db_xref="dbSNP:201797884"
variation 697
/gene="CCR5"
/gene_synonym="CC-CKR-5; CCCKR5; CCR-5; CD195; CKR-5;
CKR5; CMKBR5; IDDM22"
/replace="a"
/replace="t"
/db_xref="dbSNP:199827265"
variation 701
/gene="CCR5"
/gene_synonym="CC-CKR-5; CCCKR5; CCR-5; CD195; CKR-5;
CKR5; CMKBR5; IDDM22"
/replace="c"
/replace="g"
/db_xref="dbSNP:56345960"
variation 704
/gene="CCR5"
/gene_synonym="CC-CKR-5; CCCKR5; CCR-5; CD195; CKR-5;
CKR5; CMKBR5; IDDM22"
/replace="a"
/replace="c"
/db_xref="dbSNP:62625034"
STS 730..1159
/gene="CCR5"
/gene_synonym="CC-CKR-5; CCCKR5; CCR-5; CD195; CKR-5;
CKR5; CMKBR5; IDDM22"
/standard_name="D3S4504"
/db_xref="UniSTS:474434"
variation 739
/gene="CCR5"
/gene_synonym="CC-CKR-5; CCCKR5; CCR-5; CD195; CKR-5;
CKR5; CMKBR5; IDDM22"
/replace="c"
/replace="t"
/db_xref="dbSNP:113552054"
variation 740
/gene="CCR5"
/gene_synonym="CC-CKR-5; CCCKR5; CCR-5; CD195; CKR-5;
CKR5; CMKBR5; IDDM22"
/replace="a"
/replace="g"
/db_xref="dbSNP:139737901"
variation 767
/gene="CCR5"
/gene_synonym="CC-CKR-5; CCCKR5; CCR-5; CD195; CKR-5;
CKR5; CMKBR5; IDDM22"
/replace="a"
/replace="g"
/db_xref="dbSNP:376137306"
variation 769
/gene="CCR5"
/gene_synonym="CC-CKR-5; CCCKR5; CCR-5; CD195; CKR-5;
CKR5; CMKBR5; IDDM22"
/replace="g"
/replace="t"
/db_xref="dbSNP:371598347"
variation 781
/gene="CCR5"
/gene_synonym="CC-CKR-5; CCCKR5; CCR-5; CD195; CKR-5;
CKR5; CMKBR5; IDDM22"
/replace="c"
/replace="t"
/db_xref="dbSNP:151126808"
variation 788
/gene="CCR5"
/gene_synonym="CC-CKR-5; CCCKR5; CCR-5; CD195; CKR-5;
CKR5; CMKBR5; IDDM22"
/replace="g"
/replace="t"
/db_xref="dbSNP:201290940"
variation 789
/gene="CCR5"
/gene_synonym="CC-CKR-5; CCCKR5; CCR-5; CD195; CKR-5;
CKR5; CMKBR5; IDDM22"
/replace="c"
/replace="t"
/db_xref="dbSNP:200419576"
variation 790
/gene="CCR5"
/gene_synonym="CC-CKR-5; CCCKR5; CCR-5; CD195; CKR-5;
CKR5; CMKBR5; IDDM22"
/replace="a"
/replace="g"
/db_xref="dbSNP:1800452"
variation 795
/gene="CCR5"
/gene_synonym="CC-CKR-5; CCCKR5; CCR-5; CD195; CKR-5;
CKR5; CMKBR5; IDDM22"
/replace="c"
/replace="t"
/db_xref="dbSNP:146972949"
variation 800
/gene="CCR5"
/gene_synonym="CC-CKR-5; CCCKR5; CCR-5; CD195; CKR-5;
CKR5; CMKBR5; IDDM22"
/replace="c"
/replace="t"
/db_xref="dbSNP:373358134"
variation 822
/gene="CCR5"
/gene_synonym="CC-CKR-5; CCCKR5; CCR-5; CD195; CKR-5;
CKR5; CMKBR5; IDDM22"
/replace="c"
/replace="g"
/db_xref="dbSNP:371621013"
variation 827
/gene="CCR5"
/gene_synonym="CC-CKR-5; CCCKR5; CCR-5; CD195; CKR-5;
CKR5; CMKBR5; IDDM22"
/replace="g"
/replace="t"
/db_xref="dbSNP:147615392"
variation 841
/gene="CCR5"
/gene_synonym="CC-CKR-5; CCCKR5; CCR-5; CD195; CKR-5;
CKR5; CMKBR5; IDDM22"
/replace="a"
/replace="c"
/replace="t"
/db_xref="dbSNP:199780106"
variation 844
/gene="CCR5"
/gene_synonym="CC-CKR-5; CCCKR5; CCR-5; CD195; CKR-5;
CKR5; CMKBR5; IDDM22"
/replace="c"
/replace="t"
/db_xref="dbSNP:201301850"
variation 859
/gene="CCR5"
/gene_synonym="CC-CKR-5; CCCKR5; CCR-5; CD195; CKR-5;
CKR5; CMKBR5; IDDM22"
/replace="c"
/replace="t"
/db_xref="dbSNP:143181119"
variation 863
/gene="CCR5"
/gene_synonym="CC-CKR-5; CCCKR5; CCR-5; CD195; CKR-5;
CKR5; CMKBR5; IDDM22"
/replace="c"
/replace="t"
/db_xref="dbSNP:141139165"
variation 881
/gene="CCR5"
/gene_synonym="CC-CKR-5; CCCKR5; CCR-5; CD195; CKR-5;
CKR5; CMKBR5; IDDM22"
/replace="c"
/replace="t"
/db_xref="dbSNP:367851873"
variation 892
/gene="CCR5"
/gene_synonym="CC-CKR-5; CCCKR5; CCR-5; CD195; CKR-5;
CKR5; CMKBR5; IDDM22"
/replace="a"
/replace="t"
/db_xref="dbSNP:142469507"
variation 928
/gene="CCR5"
/gene_synonym="CC-CKR-5; CCCKR5; CCR-5; CD195; CKR-5;
CKR5; CMKBR5; IDDM22"
/replace="a"
/replace="g"
/replace="t"
/db_xref="dbSNP:184279915"
variation 946
/gene="CCR5"
/gene_synonym="CC-CKR-5; CCCKR5; CCR-5; CD195; CKR-5;
CKR5; CMKBR5; IDDM22"
/replace="g"
/replace="t"
/db_xref="dbSNP:112762802"
STS 959..1142
/gene="CCR5"
/gene_synonym="CC-CKR-5; CCCKR5; CCR-5; CD195; CKR-5;
CKR5; CMKBR5; IDDM22"
/standard_name="RH65248"
/db_xref="UniSTS:88902"
variation 961
/gene="CCR5"
/gene_synonym="CC-CKR-5; CCCKR5; CCR-5; CD195; CKR-5;
CKR5; CMKBR5; IDDM22"
/replace="a"
/replace="c"
/db_xref="dbSNP:374495269"
STS 971..1147
/gene="CCR5"
/gene_synonym="CC-CKR-5; CCCKR5; CCR-5; CD195; CKR-5;
CKR5; CMKBR5; IDDM22"
/standard_name="STS-X91492"
/db_xref="UniSTS:43626"
variation 982
/gene="CCR5"
/gene_synonym="CC-CKR-5; CCCKR5; CCR-5; CD195; CKR-5;
CKR5; CMKBR5; IDDM22"
/replace="g"
/replace="t"
/db_xref="dbSNP:55956105"
variation 984
/gene="CCR5"
/gene_synonym="CC-CKR-5; CCCKR5; CCR-5; CD195; CKR-5;
CKR5; CMKBR5; IDDM22"
/replace="a"
/replace="g"
/db_xref="dbSNP:150592242"
variation 986
/gene="CCR5"
/gene_synonym="CC-CKR-5; CCCKR5; CCR-5; CD195; CKR-5;
CKR5; CMKBR5; IDDM22"
/replace="a"
/replace="g"
/db_xref="dbSNP:372879037"
variation 989
/gene="CCR5"
/gene_synonym="CC-CKR-5; CCCKR5; CCR-5; CD195; CKR-5;
CKR5; CMKBR5; IDDM22"
/replace="c"
/replace="g"
/db_xref="dbSNP:149622978"
variation 993
/gene="CCR5"
/gene_synonym="CC-CKR-5; CCCKR5; CCR-5; CD195; CKR-5;
CKR5; CMKBR5; IDDM22"
/replace="c"
/replace="t"
/db_xref="dbSNP:200740810"
variation 996
/gene="CCR5"
/gene_synonym="CC-CKR-5; CCCKR5; CCR-5; CD195; CKR-5;
CKR5; CMKBR5; IDDM22"
/replace="a"
/replace="g"
/db_xref="dbSNP:375777270"
variation 1004
/gene="CCR5"
/gene_synonym="CC-CKR-5; CCCKR5; CCR-5; CD195; CKR-5;
CKR5; CMKBR5; IDDM22"
/replace="c"
/replace="t"
/db_xref="dbSNP:368391698"
variation 1023
/gene="CCR5"
/gene_synonym="CC-CKR-5; CCCKR5; CCR-5; CD195; CKR-5;
CKR5; CMKBR5; IDDM22"
/replace="a"
/replace="g"
/db_xref="dbSNP:55916127"
variation 1024
/gene="CCR5"
/gene_synonym="CC-CKR-5; CCCKR5; CCR-5; CD195; CKR-5;
CKR5; CMKBR5; IDDM22"
/replace="g"
/replace="t"
/db_xref="dbSNP:1800943"
variation 1067
/gene="CCR5"
/gene_synonym="CC-CKR-5; CCCKR5; CCR-5; CD195; CKR-5;
CKR5; CMKBR5; IDDM22"
/replace="c"
/replace="t"
/db_xref="dbSNP:371813238"
variation 1074
/gene="CCR5"
/gene_synonym="CC-CKR-5; CCCKR5; CCR-5; CD195; CKR-5;
CKR5; CMKBR5; IDDM22"
/replace="a"
/replace="g"
/db_xref="dbSNP:188772198"
variation 1077
/gene="CCR5"
/gene_synonym="CC-CKR-5; CCCKR5; CCR-5; CD195; CKR-5;
CKR5; CMKBR5; IDDM22"
/replace="c"
/replace="t"
/db_xref="dbSNP:374959868"
variation 1078
/gene="CCR5"
/gene_synonym="CC-CKR-5; CCCKR5; CCR-5; CD195; CKR-5;
CKR5; CMKBR5; IDDM22"
/replace="a"
/replace="g"
/db_xref="dbSNP:369373756"
variation 1106
/gene="CCR5"
/gene_synonym="CC-CKR-5; CCCKR5; CCR-5; CD195; CKR-5;
CKR5; CMKBR5; IDDM22"
/replace="c"
/replace="g"
/db_xref="dbSNP:372786661"
variation 1110..1111
/gene="CCR5"
/gene_synonym="CC-CKR-5; CCCKR5; CCR-5; CD195; CKR-5;
CKR5; CMKBR5; IDDM22"
/replace=""
/replace="c"
/db_xref="dbSNP:34962689"
variation 1112
/gene="CCR5"
/gene_synonym="CC-CKR-5; CCCKR5; CCR-5; CD195; CKR-5;
CKR5; CMKBR5; IDDM22"
/replace="a"
/replace="g"
/db_xref="dbSNP:35853487"
variation 1113
/gene="CCR5"
/gene_synonym="CC-CKR-5; CCCKR5; CCR-5; CD195; CKR-5;
CKR5; CMKBR5; IDDM22"
/replace="c"
/replace="g"
/db_xref="dbSNP:199846907"
variation 1115
/gene="CCR5"
/gene_synonym="CC-CKR-5; CCCKR5; CCR-5; CD195; CKR-5;
CKR5; CMKBR5; IDDM22"
/replace="c"
/replace="t"
/db_xref="dbSNP:201780857"
variation 1118
/gene="CCR5"
/gene_synonym="CC-CKR-5; CCCKR5; CCR-5; CD195; CKR-5;
CKR5; CMKBR5; IDDM22"
/replace="c"
/replace="t"
/db_xref="dbSNP:148802293"
variation 1122
/gene="CCR5"
/gene_synonym="CC-CKR-5; CCCKR5; CCR-5; CD195; CKR-5;
CKR5; CMKBR5; IDDM22"
/replace="a"
/replace="c"
/replace="t"
/db_xref="dbSNP:147879075"
variation 1126
/gene="CCR5"
/gene_synonym="CC-CKR-5; CCCKR5; CCR-5; CD195; CKR-5;
CKR5; CMKBR5; IDDM22"
/replace="c"
/replace="t"
/db_xref="dbSNP:1800944"
variation 1138
/gene="CCR5"
/gene_synonym="CC-CKR-5; CCCKR5; CCR-5; CD195; CKR-5;
CKR5; CMKBR5; IDDM22"
/replace="a"
/replace="t"
/db_xref="dbSNP:1800945"
variation 1153
/gene="CCR5"
/gene_synonym="CC-CKR-5; CCCKR5; CCR-5; CD195; CKR-5;
CKR5; CMKBR5; IDDM22"
/replace="g"
/replace="t"
/db_xref="dbSNP:375916464"
variation 1160
/gene="CCR5"
/gene_synonym="CC-CKR-5; CCCKR5; CCR-5; CD195; CKR-5;
CKR5; CMKBR5; IDDM22"
/replace="a"
/replace="g"
/db_xref="dbSNP:2157060"
variation 1184
/gene="CCR5"
/gene_synonym="CC-CKR-5; CCCKR5; CCR-5; CD195; CKR-5;
CKR5; CMKBR5; IDDM22"
/replace="c"
/replace="t"
/db_xref="dbSNP:191297617"
variation 1293
/gene="CCR5"
/gene_synonym="CC-CKR-5; CCCKR5; CCR-5; CD195; CKR-5;
CKR5; CMKBR5; IDDM22"
/replace="c"
/replace="g"
/db_xref="dbSNP:146080174"
variation 1375
/gene="CCR5"
/gene_synonym="CC-CKR-5; CCCKR5; CCR-5; CD195; CKR-5;
CKR5; CMKBR5; IDDM22"
/replace="a"
/replace="g"
/db_xref="dbSNP:112622745"
variation 1418
/gene="CCR5"
/gene_synonym="CC-CKR-5; CCCKR5; CCR-5; CD195; CKR-5;
CKR5; CMKBR5; IDDM22"
/replace="a"
/replace="g"
/db_xref="dbSNP:183840358"
variation 1471
/gene="CCR5"
/gene_synonym="CC-CKR-5; CCCKR5; CCR-5; CD195; CKR-5;
CKR5; CMKBR5; IDDM22"
/replace="c"
/replace="g"
/db_xref="dbSNP:41414147"
variation 1544
/gene="CCR5"
/gene_synonym="CC-CKR-5; CCCKR5; CCR-5; CD195; CKR-5;
CKR5; CMKBR5; IDDM22"
/replace="c"
/replace="t"
/db_xref="dbSNP:143589063"
variation 1680
/gene="CCR5"
/gene_synonym="CC-CKR-5; CCCKR5; CCR-5; CD195; CKR-5;
CKR5; CMKBR5; IDDM22"
/replace="c"
/replace="t"
/db_xref="dbSNP:369515918"
variation 1801
/gene="CCR5"
/gene_synonym="CC-CKR-5; CCCKR5; CCR-5; CD195; CKR-5;
CKR5; CMKBR5; IDDM22"
/replace="a"
/replace="t"
/db_xref="dbSNP:145725153"
variation 1833
/gene="CCR5"
/gene_synonym="CC-CKR-5; CCCKR5; CCR-5; CD195; CKR-5;
CKR5; CMKBR5; IDDM22"
/replace="c"
/replace="t"
/db_xref="dbSNP:373926603"
variation 1874
/gene="CCR5"
/gene_synonym="CC-CKR-5; CCCKR5; CCR-5; CD195; CKR-5;
CKR5; CMKBR5; IDDM22"
/replace="a"
/replace="g"
/db_xref="dbSNP:41495153"
variation 1880
/gene="CCR5"
/gene_synonym="CC-CKR-5; CCCKR5; CCR-5; CD195; CKR-5;
CKR5; CMKBR5; IDDM22"
/replace="a"
/replace="g"
/db_xref="dbSNP:142957506"
variation 1898
/gene="CCR5"
/gene_synonym="CC-CKR-5; CCCKR5; CCR-5; CD195; CKR-5;
CKR5; CMKBR5; IDDM22"
/replace="a"
/replace="g"
/db_xref="dbSNP:151122728"
variation 1918
/gene="CCR5"
/gene_synonym="CC-CKR-5; CCCKR5; CCR-5; CD195; CKR-5;
CKR5; CMKBR5; IDDM22"
/replace="c"
/replace="t"
/db_xref="dbSNP:375306827"
variation 1945
/gene="CCR5"
/gene_synonym="CC-CKR-5; CCCKR5; CCR-5; CD195; CKR-5;
CKR5; CMKBR5; IDDM22"
/replace="c"
/replace="t"
/db_xref="dbSNP:17765882"
variation 1965
/gene="CCR5"
/gene_synonym="CC-CKR-5; CCCKR5; CCR-5; CD195; CKR-5;
CKR5; CMKBR5; IDDM22"
/replace="a"
/replace="g"
/db_xref="dbSNP:41418945"
variation 1968
/gene="CCR5"
/gene_synonym="CC-CKR-5; CCCKR5; CCR-5; CD195; CKR-5;
CKR5; CMKBR5; IDDM22"
/replace="a"
/replace="g"
/db_xref="dbSNP:41466044"
variation 1990
/gene="CCR5"
/gene_synonym="CC-CKR-5; CCCKR5; CCR-5; CD195; CKR-5;
CKR5; CMKBR5; IDDM22"
/replace="a"
/replace="g"
/db_xref="dbSNP:190456231"
variation 2125
/gene="CCR5"
/gene_synonym="CC-CKR-5; CCCKR5; CCR-5; CD195; CKR-5;
CKR5; CMKBR5; IDDM22"
/replace="a"
/replace="g"
/db_xref="dbSNP:41345848"
variation 2127
/gene="CCR5"
/gene_synonym="CC-CKR-5; CCCKR5; CCR-5; CD195; CKR-5;
CKR5; CMKBR5; IDDM22"
/replace="a"
/replace="g"
/db_xref="dbSNP:141257116"
variation 2151
/gene="CCR5"
/gene_synonym="CC-CKR-5; CCCKR5; CCR-5; CD195; CKR-5;
CKR5; CMKBR5; IDDM22"
/replace="c"
/replace="t"
/db_xref="dbSNP:200501663"
variation 2167
/gene="CCR5"
/gene_synonym="CC-CKR-5; CCCKR5; CCR-5; CD195; CKR-5;
CKR5; CMKBR5; IDDM22"
/replace="a"
/replace="t"
/db_xref="dbSNP:201290180"
variation 2171
/gene="CCR5"
/gene_synonym="CC-CKR-5; CCCKR5; CCR-5; CD195; CKR-5;
CKR5; CMKBR5; IDDM22"
/replace="a"
/replace="g"
/db_xref="dbSNP:199648605"
variation 2199
/gene="CCR5"
/gene_synonym="CC-CKR-5; CCCKR5; CCR-5; CD195; CKR-5;
CKR5; CMKBR5; IDDM22"
/replace="g"
/replace="t"
/db_xref="dbSNP:1800874"
variation 2209
/gene="CCR5"
/gene_synonym="CC-CKR-5; CCCKR5; CCR-5; CD195; CKR-5;
CKR5; CMKBR5; IDDM22"
/replace="a"
/replace="c"
/db_xref="dbSNP:200364389"
variation 2225
/gene="CCR5"
/gene_synonym="CC-CKR-5; CCCKR5; CCR-5; CD195; CKR-5;
CKR5; CMKBR5; IDDM22"
/replace="c"
/replace="g"
/db_xref="dbSNP:201423367"
variation 2237
/gene="CCR5"
/gene_synonym="CC-CKR-5; CCCKR5; CCR-5; CD195; CKR-5;
CKR5; CMKBR5; IDDM22"
/replace="c"
/replace="t"
/db_xref="dbSNP:186889269"
variation 2272
/gene="CCR5"
/gene_synonym="CC-CKR-5; CCCKR5; CCR-5; CD195; CKR-5;
CKR5; CMKBR5; IDDM22"
/replace="c"
/replace="g"
/db_xref="dbSNP:146926765"
variation 2327
/gene="CCR5"
/gene_synonym="CC-CKR-5; CCCKR5; CCR-5; CD195; CKR-5;
CKR5; CMKBR5; IDDM22"
/replace="g"
/replace="t"
/db_xref="dbSNP:137866928"
variation 2347
/gene="CCR5"
/gene_synonym="CC-CKR-5; CCCKR5; CCR-5; CD195; CKR-5;
CKR5; CMKBR5; IDDM22"
/replace="c"
/replace="t"
/db_xref="dbSNP:41535253"
variation 2415
/gene="CCR5"
/gene_synonym="CC-CKR-5; CCCKR5; CCR-5; CD195; CKR-5;
CKR5; CMKBR5; IDDM22"
/replace="a"
/replace="g"
/db_xref="dbSNP:41526948"
variation 2427
/gene="CCR5"
/gene_synonym="CC-CKR-5; CCCKR5; CCR-5; CD195; CKR-5;
CKR5; CMKBR5; IDDM22"
/replace="c"
/replace="t"
/db_xref="dbSNP:77024144"
variation 2579
/gene="CCR5"
/gene_synonym="CC-CKR-5; CCCKR5; CCR-5; CD195; CKR-5;
CKR5; CMKBR5; IDDM22"
/replace="c"
/replace="t"
/db_xref="dbSNP:201417500"
variation 2580
/gene="CCR5"
/gene_synonym="CC-CKR-5; CCCKR5; CCR-5; CD195; CKR-5;
CKR5; CMKBR5; IDDM22"
/replace="a"
/replace="c"
/db_xref="dbSNP:3188094"
variation 2584
/gene="CCR5"
/gene_synonym="CC-CKR-5; CCCKR5; CCR-5; CD195; CKR-5;
CKR5; CMKBR5; IDDM22"
/replace="a"
/replace="g"
/db_xref="dbSNP:190094030"
variation 2608
/gene="CCR5"
/gene_synonym="CC-CKR-5; CCCKR5; CCR-5; CD195; CKR-5;
CKR5; CMKBR5; IDDM22"
/replace="c"
/replace="t"
/db_xref="dbSNP:181602248"
variation 2612
/gene="CCR5"
/gene_synonym="CC-CKR-5; CCCKR5; CCR-5; CD195; CKR-5;
CKR5; CMKBR5; IDDM22"
/replace="c"
/replace="g"
/db_xref="dbSNP:185327310"
variation 2694
/gene="CCR5"
/gene_synonym="CC-CKR-5; CCCKR5; CCR-5; CD195; CKR-5;
CKR5; CMKBR5; IDDM22"
/replace="g"
/replace="t"
/db_xref="dbSNP:1048115"
variation 2787
/gene="CCR5"
/gene_synonym="CC-CKR-5; CCCKR5; CCR-5; CD195; CKR-5;
CKR5; CMKBR5; IDDM22"
/replace="g"
/replace="t"
/db_xref="dbSNP:141737357"
variation 2798
/gene="CCR5"
/gene_synonym="CC-CKR-5; CCCKR5; CCR-5; CD195; CKR-5;
CKR5; CMKBR5; IDDM22"
/replace="a"
/replace="c"
/db_xref="dbSNP:41442546"
variation 2895
/gene="CCR5"
/gene_synonym="CC-CKR-5; CCCKR5; CCR-5; CD195; CKR-5;
CKR5; CMKBR5; IDDM22"
/replace="a"
/replace="g"
/db_xref="dbSNP:190136403"
variation 2901
/gene="CCR5"
/gene_synonym="CC-CKR-5; CCCKR5; CCR-5; CD195; CKR-5;
CKR5; CMKBR5; IDDM22"
/replace="a"
/replace="g"
/db_xref="dbSNP:376306118"
variation 2953
/gene="CCR5"
/gene_synonym="CC-CKR-5; CCCKR5; CCR-5; CD195; CKR-5;
CKR5; CMKBR5; IDDM22"
/replace="c"
/replace="t"
/db_xref="dbSNP:182052831"
variation 2960
/gene="CCR5"
/gene_synonym="CC-CKR-5; CCCKR5; CCR-5; CD195; CKR-5;
CKR5; CMKBR5; IDDM22"
/replace="c"
/replace="g"
/db_xref="dbSNP:41512547"
variation 3041
/gene="CCR5"
/gene_synonym="CC-CKR-5; CCCKR5; CCR-5; CD195; CKR-5;
CKR5; CMKBR5; IDDM22"
/replace="a"
/replace="c"
/db_xref="dbSNP:746492"
variation 3043
/gene="CCR5"
/gene_synonym="CC-CKR-5; CCCKR5; CCR-5; CD195; CKR-5;
CKR5; CMKBR5; IDDM22"
/replace="c"
/replace="t"
/db_xref="dbSNP:200688955"
variation 3055
/gene="CCR5"
/gene_synonym="CC-CKR-5; CCCKR5; CCR-5; CD195; CKR-5;
CKR5; CMKBR5; IDDM22"
/replace="g"
/replace="t"
/db_xref="dbSNP:186138215"
variation 3069
/gene="CCR5"
/gene_synonym="CC-CKR-5; CCCKR5; CCR-5; CD195; CKR-5;
CKR5; CMKBR5; IDDM22"
/replace="a"
/replace="t"
/db_xref="dbSNP:192256035"
variation 3211
/gene="CCR5"
/gene_synonym="CC-CKR-5; CCCKR5; CCR-5; CD195; CKR-5;
CKR5; CMKBR5; IDDM22"
/replace="a"
/replace="g"
/db_xref="dbSNP:184040468"
variation 3227
/gene="CCR5"
/gene_synonym="CC-CKR-5; CCCKR5; CCR-5; CD195; CKR-5;
CKR5; CMKBR5; IDDM22"
/replace="a"
/replace="g"
/db_xref="dbSNP:370386700"
variation 3254
/gene="CCR5"
/gene_synonym="CC-CKR-5; CCCKR5; CCR-5; CD195; CKR-5;
CKR5; CMKBR5; IDDM22"
/replace="g"
/replace="t"
/db_xref="dbSNP:188577829"
variation 3299
/gene="CCR5"
/gene_synonym="CC-CKR-5; CCCKR5; CCR-5; CD195; CKR-5;
CKR5; CMKBR5; IDDM22"
/replace="a"
/replace="g"
/db_xref="dbSNP:374785441"
polyA_signal 3403..3408
/gene="CCR5"
/gene_synonym="CC-CKR-5; CCCKR5; CCR-5; CD195; CKR-5;
CKR5; CMKBR5; IDDM22"
polyA_site 3426
/gene="CCR5"
/gene_synonym="CC-CKR-5; CCCKR5; CCR-5; CD195; CKR-5;
CKR5; CMKBR5; IDDM22"
ORIGIN
cttcagatagattatatctggagtgaagaatcctgccacctatgtatctggcatagtctcatctggccagaagagctgagacatccgttcccctacaagaaactctccccgggtggaacaagatggattatcaagtgtcaagtccaatctatgacatcaattattatacatcggagccctgccaaaaaatcaatgtgaagcaaatcgcagcccgcctcctgcctccgctctactcactggtgttcatctttggttttgtgggcaacatgctggtcatcctcatcctgataaactgcaaaaggctgaagagcatgactgacatctacctgctcaacctggccatctctgacctgtttttccttcttactgtccccttctgggctcactatgctgccgcccagtgggactttggaaatacaatgtgtcaactcttgacagggctctattttataggcttcttctctggaatcttcttcatcatcctcctgacaatcgataggtacctggctgtcgtccatgctgtgtttgctttaaaagccaggacggtcacctttggggtggtgacaagtgtgatcacttgggtggtggctgtgtttgcgtctctcccaggaatcatctttaccagatctcaaaaagaaggtcttcattacacctgcagctctcattttccatacagtcagtatcaattctggaagaatttccagacattaaagatagtcatcttggggctggtcctgccgctgcttgtcatggtcatctgctactcgggaatcctaaaaactctgcttcggtgtcgaaatgagaagaagaggcacagggctgtgaggcttatcttcaccatcatgattgtttattttctcttctgggctccctacaacattgtccttctcctgaacaccttccaggaattctttggcctgaataattgcagtagctctaacaggttggaccaagctatgcaggtgacagagactcttgggatgacgcactgctgcatcaaccccatcatctatgcctttgtcggggagaagttcagaaactacctcttagtcttcttccaaaagcacattgccaaacgcttctgcaaatgctgttctattttccagcaagaggctcccgagcgagcaagctcagtttacacccgatccactggggagcaggaaatatctgtgggcttgtgacacggactcaagtgggctggtgacccagtcagagttgtgcacatggcttagttttcatacacagcctgggctgggggtggggtgggagaggtcttttttaaaaggaagttactgttatagagggtctaagattcatccatttatttggcatctgtttaaagtagattagatcttttaagcccatcaattatagaaagccaaatcaaaatatgttgatgaaaaatagcaacctttttatctccccttcacatgcatcaagttattgacaaactctcccttcactccgaaagttccttatgtatatttaaaagaaagcctcagagaattgctgattcttgagtttagtgatctgaacagaaataccaaaattatttcagaaatgtacaactttttacctagtacaaggcaacatataggttgtaaatgtgtttaaaacaggtctttgtcttgctatggggagaaaagacatgaatatgattagtaaagaaatgacacttttcatgtgtgatttcccctccaaggtatggttaataagtttcactgacttagaaccaggcgagagacttgtggcctgggagagctggggaagcttcttaaatgagaaggaatttgagttggatcatctattgctggcaaagacagaagcctcactgcaagcactgcatgggcaagcttggctgtagaaggagacagagctggttgggaagacatggggaggaaggacaaggctagatcatgaagaaccttgacggcattgctccgtctaagtcatgagctgagcagggagatcctggttggtgttgcagaaggtttactctgtggccaaaggagggtcaggaaggatgagcatttagggcaaggagaccaccaacagccctcaggtcagggtgaggatggcctctgctaagctcaaggcgtgaggatgggaaggagggaggtattcgtaaggatgggaaggagggaggtattcgtgcagcatatgaggatgcagagtcagcagaactggggtggatttgggttggaagtgagggtcagagaggagtcagagagaatccctagtcttcaagcagattggagaaacccttgaaaagacatcaagcacagaaggaggaggaggaggtttaggtcaagaagaagatggattggtgtaaaaggatgggtctggtttgcagagcttgaacacagtctcacccagactccaggctgtctttcactgaatgcttctgacttcatagatttccttcccatcccagctgaaatactgaggggtctccaggaggagactagatttatgaatacacgaggtatgaggtctaggaacatacttcagctcacacatgagatctaggtgaggattgattacctagtagtcatttcatgggttgttgggaggattctatgaggcaaccacaggcagcatttagcacatactacacattcaataagcatcaaactcttagttactcattcagggatagcactgagcaaagcattgagcaaaggggtcccatagaggtgagggaagcctgaaaaactaagatgctgcctgcccagtgcacacaagtgtaggtatcattttctgcatttaaccgtcaataggcaaaggggggaagggacatattcatttggaaataagctgccttgagccttaaaacccacaaaagtacaatttaccagcctccgtatttcagactgaatgggggtggggggggcgccttaggtacttattccagatgccttctccagacaaaccagaagcaacagaaaaaatcgtctctccctccctttgaaatgaatataccccttagtgtttgggtatattcatttcaaagggagagagagaggtttttttctgttctgtctcatatgattgtgcacatacttgagactgttttgaatttgggggatggctaaaaccatcatagtacaggtaaggtgagggaatagtaagtggtgagaactactcagggaatgaaggtgtcagaataataagaggtgctactgactttctcagcctctgaatatgaacggtgagcattgtggctgtcagcaggaagcaacgaagggaaatgtctttccttttgctcttaagttgtggagagtgcaacagtagcataggaccctaccctctgggccaagtcaaagacattctgacatcttagtatttgcatattcttatgtatgtgaaagttacaaattgcttgaaagaaaatatgcatctaataaaaaacaccttctaaaataaaaaaaaaaaaaaaaaaaaaaaaaaa
//
ANNOTATIONS from NCBI Entrez Gene (20130726):
GeneID:1234 -> Molecular function: GO:0003779 [actin binding] evidence: IDA
GeneID:1234 -> Molecular function: GO:0004435 [phosphatidylinositol phospholipase C activity] evidence: TAS
GeneID:1234 -> Molecular function: GO:0004950 [chemokine receptor activity] evidence: TAS
GeneID:1234 -> Molecular function: GO:0005515 [protein binding] evidence: IPI
GeneID:1234 -> Molecular function: GO:0015026 [coreceptor activity] evidence: TAS
GeneID:1234 -> Molecular function: GO:0016493 [C-C chemokine receptor activity] evidence: IDA
GeneID:1234 -> Molecular function: GO:0016493 [C-C chemokine receptor activity] evidence: NAS
GeneID:1234 -> Molecular function: GO:0019957 [C-C chemokine binding] evidence: IPI
GeneID:1234 -> Molecular function: GO:0071791 [chemokine (C-C motif) ligand 5 binding] evidence: IPI
GeneID:1234 -> Biological process: GO:0000165 [MAPK cascade] evidence: IEP
GeneID:1234 -> Biological process: GO:0002407 [dendritic cell chemotaxis] evidence: TAS
GeneID:1234 -> Biological process: GO:0006816 [calcium ion transport] evidence: IDA
GeneID:1234 -> Biological process: GO:0006935 [chemotaxis] evidence: TAS
GeneID:1234 -> Biological process: GO:0006954 [inflammatory response] evidence: IEA
GeneID:1234 -> Biological process: GO:0006955 [immune response] evidence: IEA
GeneID:1234 -> Biological process: GO:0006968 [cellular defense response] evidence: TAS
GeneID:1234 -> Biological process: GO:0007166 [cell surface receptor signaling pathway] evidence: TAS
GeneID:1234 -> Biological process: GO:0007186 [G-protein coupled receptor signaling pathway] evidence: IMP
GeneID:1234 -> Biological process: GO:0007204 [elevation of cytosolic calcium ion concentration] evidence: TAS
GeneID:1234 -> Biological process: GO:0007267 [cell-cell signaling] evidence: IDA
GeneID:1234 -> Biological process: GO:0014808 [release of sequestered calcium ion into cytosol by sarcoplasmic reticulum] evidence: IDA
GeneID:1234 -> Biological process: GO:0016032 [viral process] evidence: TAS
GeneID:1234 -> Biological process: GO:0019048 [modulation by virus of host morphology or physiology] evidence: IEA
GeneID:1234 -> Biological process: GO:0019722 [calcium-mediated signaling] evidence: IDA
GeneID:1234 -> Biological process: GO:0023052 [signaling] evidence: IEP
GeneID:1234 -> Biological process: GO:0030260 [entry into host cell] evidence: TAS
GeneID:1234 -> Biological process: GO:0070098 [chemokine-mediated signaling pathway] evidence: TAS
GeneID:1234 -> Biological process: GO:0070723 [response to cholesterol] evidence: IMP
GeneID:1234 -> Biological process: GO:0071222 [cellular response to lipopolysaccharide] evidence: IEP
GeneID:1234 -> Cellular component: GO:0005737 [cytoplasm] evidence: TAS
GeneID:1234 -> Cellular component: GO:0005768 [endosome] evidence: IDA
GeneID:1234 -> Cellular component: GO:0005886 [plasma membrane] evidence: TAS
GeneID:1234 -> Cellular component: GO:0005887 [integral to plasma membrane] evidence: TAS
GeneID:1234 -> Cellular component: GO:0009897 [external side of plasma membrane] evidence: IDA
GeneID:1234 -> Cellular component: GO:0009986 [cell surface] evidence: IDA
by
@meso_cacase at
DBCLS
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