Home |
Help |
Advanced search
2025-05-09 18:39:29, GGRNA : RefSeq release 60 (20130726)
LOCUS NM_001164380 3065 bp mRNA linear PRI 07-JUN-2013
DEFINITION Homo sapiens staufen double-stranded RNA binding protein 2 (STAU2),
transcript variant 1, mRNA.
ACCESSION NM_001164380
VERSION NM_001164380.1 GI:256418994
KEYWORDS RefSeq.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3065)
AUTHORS Park,E., Gleghorn,M.L. and Maquat,L.E.
TITLE Staufen2 functions in Staufen1-mediated mRNA decay by binding to
itself and its paralog and promoting UPF1 helicase but not ATPase
activity
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 110 (2), 405-412 (2013)
PUBMED 23263869
REMARK GeneRIF: Staufen2 functions in Staufen1-mediated mRNA decay by
binding to itself and its paralog and promoting UPF1 helicase but
not ATPase activity.
REFERENCE 2 (bases 1 to 3065)
AUTHORS Lebeau,G., Miller,L.C., Tartas,M., McAdam,R., Laplante,I.,
Badeaux,F., DesGroseillers,L., Sossin,W.S. and Lacaille,J.C.
TITLE Staufen 2 regulates mGluR long-term depression and Map1b mRNA
distribution in hippocampal neurons
JOURNAL Learn. Mem. 18 (5), 314-326 (2011)
PUBMED 21508097
REMARK GeneRIF: We suggest a role for Stau2 in the generation and
regulation of Map1b mRNA containing granules that are required for
mGluR-long-term depression
Publication Status: Online-Only
REFERENCE 3 (bases 1 to 3065)
AUTHORS Furic,L., Maher-Laporte,M. and DesGroseillers,L.
TITLE A genome-wide approach identifies distinct but overlapping subsets
of cellular mRNAs associated with Staufen1- and Staufen2-containing
ribonucleoprotein complexes
JOURNAL RNA 14 (2), 324-335 (2008)
PUBMED 18094122
REMARK GeneRIF: Stau1- and Stau2-mRNPs associate with distinct but
overlapping sets of cellular mRNAs.
REFERENCE 4 (bases 1 to 3065)
AUTHORS Beausoleil,S.A., Villen,J., Gerber,S.A., Rush,J. and Gygi,S.P.
TITLE A probability-based approach for high-throughput protein
phosphorylation analysis and site localization
JOURNAL Nat. Biotechnol. 24 (10), 1285-1292 (2006)
PUBMED 16964243
REFERENCE 5 (bases 1 to 3065)
AUTHORS Duchaine,T.F., Hemraj,I., Furic,L., Deitinghoff,A., Kiebler,M.A.
and DesGroseillers,L.
TITLE Staufen2 isoforms localize to the somatodendritic domain of neurons
and interact with different organelles
JOURNAL J. Cell. Sci. 115 (PT 16), 3285-3295 (2002)
PUBMED 12140260
REMARK GeneRIF: Data show that Stau2 is localized to the neuronal soma and
dendrites, but it does not colocalize with Stau1-containing
particles.
REFERENCE 6 (bases 1 to 3065)
AUTHORS Kiebler,M.A. and DesGroseillers,L.
TITLE Molecular insights into mRNA transport and local translation in the
mammalian nervous system
JOURNAL Neuron 25 (1), 19-28 (2000)
PUBMED 10707969
REMARK Review article
REFERENCE 7 (bases 1 to 3065)
AUTHORS Buchner,G., Bassi,M.T., Andolfi,G., Ballabio,A. and Franco,B.
TITLE Identification of a novel homolog of the Drosophila staufen protein
in the chromosome 8q13-q21.1 region
JOURNAL Genomics 62 (1), 113-118 (1999)
PUBMED 10585778
COMMENT REVIEWED REFSEQ: This record has been curated by NCBI staff. The
reference sequence was derived from DB501161.1, AK002152.1,
AC100784.2 and AF459097.1.
Summary: Staufen homolog 2 is a member of the family of
double-stranded RNA (dsRNA)-binding proteins involved in the
transport and/or localization of mRNAs to different subcellular
compartments and/or organelles. These proteins are characterized by
the presence of multiple dsRNA-binding domains which are required
to bind RNAs having double-stranded secondary structures. Staufen
homolog 2 shares 48.5% and 59.9% similarity with drosophila and
human staufen, respectively. The exact function of Staufen homolog
2 is not known, but since it contains 3 copies of conserved dsRNA
binding domain, it could be involved in double-stranded RNA binding
events. Several transcript variants encoding different isoforms
have been found for this gene. [provided by RefSeq, Aug 2009].
Transcript Variant: This variant (1) represents the longest isoform
(a).
##Evidence-Data-START##
Transcript exon combination :: AK002152.1 [ECO:0000332]
RNAseq introns :: mixed/partial sample support
ERS025081, ERS025082 [ECO:0000350]
##Evidence-Data-END##
COMPLETENESS: complete on the 3' end.
PRIMARY REFSEQ_SPAN PRIMARY_IDENTIFIER PRIMARY_SPAN COMP
1-87 DB501161.1 1-87
88-932 AK002152.1 1-845
933-933 AC100784.2 53879-53879
934-3038 AK002152.1 847-2951
3039-3065 AF459097.1 2758-2784
FEATURES Location/Qualifiers
source 1..3065
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/chromosome="8"
/map="8q21.11"
gene 1..3065
/gene="STAU2"
/gene_synonym="39K2; 39K3"
/note="staufen double-stranded RNA binding protein 2"
/db_xref="GeneID:27067"
/db_xref="HGNC:11371"
/db_xref="MIM:605920"
exon 1..145
/gene="STAU2"
/gene_synonym="39K2; 39K3"
/inference="alignment:Splign:1.39.8"
variation complement(92)
/gene="STAU2"
/gene_synonym="39K2; 39K3"
/replace="c"
/replace="g"
/db_xref="dbSNP:182586484"
variation complement(141)
/gene="STAU2"
/gene_synonym="39K2; 39K3"
/replace="a"
/replace="g"
/db_xref="dbSNP:190921391"
exon 146..258
/gene="STAU2"
/gene_synonym="39K2; 39K3"
/inference="alignment:Splign:1.39.8"
variation complement(155)
/gene="STAU2"
/gene_synonym="39K2; 39K3"
/replace="a"
/replace="g"
/db_xref="dbSNP:367669479"
variation complement(180..181)
/gene="STAU2"
/gene_synonym="39K2; 39K3"
/replace=""
/replace="t"
/db_xref="dbSNP:367547275"
exon 259..324
/gene="STAU2"
/gene_synonym="39K2; 39K3"
/inference="alignment:Splign:1.39.8"
variation complement(269)
/gene="STAU2"
/gene_synonym="39K2; 39K3"
/replace="c"
/replace="t"
/db_xref="dbSNP:202210177"
variation complement(270)
/gene="STAU2"
/gene_synonym="39K2; 39K3"
/replace="g"
/replace="t"
/db_xref="dbSNP:375973716"
misc_feature 303..305
/gene="STAU2"
/gene_synonym="39K2; 39K3"
/note="upstream in-frame stop codon"
exon 325..455
/gene="STAU2"
/gene_synonym="39K2; 39K3"
/inference="alignment:Splign:1.39.8"
CDS 342..2054
/gene="STAU2"
/gene_synonym="39K2; 39K3"
/note="isoform a is encoded by transcript variant 1;
double-stranded RNA-binding protein Staufen homolog 2;
staufen homolog 2; staufen, RNA binding protein, homolog
2"
/codon_start=1
/product="double-stranded RNA-binding protein Staufen
homolog 2 isoform a"
/protein_id="NP_001157852.1"
/db_xref="GI:256418995"
/db_xref="CCDS:CCDS55247.1"
/db_xref="GeneID:27067"
/db_xref="HGNC:11371"
/db_xref="MIM:605920"
/translation="
MANPKEKTAMCLVNELARFNRVQPQYKLLNERGPAHSKMFSVQLSLGEQTWESEGSSIKKAQQAVANKALTESTLPKPVQKPPKSNVNNNPGSITPTVELNGLAMKRGEPAIYRPLDPKPFPNYRANYNFRGMYNQRYHCPVPKIFYVQLTVGNNEFFGEGKTRQAARHNAAMKALQALQNEPIPERSPQNGESGKDVDDDKDANKSEISLVFEIALKRNMPVSFEVIKESGPPHMKSFVTRVSVGEFSAEGEGNSKKLSKKRAATTVLQELKKLPPLPVVEKPKLFFKKRPKTIVKAGPEYGQGMNPISRLAQIQQAKKEKEPDYVLLSERGMPRRREFVMQVKVGNEVATGTGPNKKIAKKNAAEAMLLQLGYKASTNLQDQLEKTGENKGWSGPKPGFPEPTNNTPKGILHLSPDVYQEMEASRHKVISGTTLGYLSPKDMNQPSSSFFSISPTSNSSATIARELLMNGTSSTAEAIGLKGSSPTPPCSPVQPSKQLEYLARIQGFQAALSALKQFSEQGLDPIDGAMNIEKGSLEKQAKHLREKADNNQAPPGSIAQDCKKSNSAV
"
misc_feature 363..551
/gene="STAU2"
/gene_synonym="39K2; 39K3"
/note="Double-stranded RNA binding motif. Binding is not
sequence specific but is highly specific for double
stranded RNA. Found in a variety of proteins including
dsRNA dependent protein kinase PKR, RNA helicases,
Drosophila staufen protein, E. coli RNase III; Region:
DSRM; cd00048"
/db_xref="CDD:28930"
misc_feature order(363..365,381..386,507..518,525..527)
/gene="STAU2"
/gene_synonym="39K2; 39K3"
/note="dsRNA binding site [nucleotide binding]; other
site"
/db_xref="CDD:28930"
misc_feature <762..878
/gene="STAU2"
/gene_synonym="39K2; 39K3"
/note="Double-stranded RNA binding motif. Binding is not
sequence specific but is highly specific for double
stranded RNA. Found in a variety of proteins including
dsRNA dependent protein kinase PKR, RNA helicases,
Drosophila staufen protein, E. coli RNase III; Region:
DSRM; cd00048"
/db_xref="CDD:28930"
misc_feature order(825..836,843..845)
/gene="STAU2"
/gene_synonym="39K2; 39K3"
/note="dsRNA binding site [nucleotide binding]; other
site"
/db_xref="CDD:28930"
misc_feature 903..905
/gene="STAU2"
/gene_synonym="39K2; 39K3"
/experiment="experimental evidence, no additional details
recorded"
/note="Phosphoserine; propagated from UniProtKB/Swiss-Prot
(Q9NUL3.1); phosphorylation site"
misc_feature 966..1151
/gene="STAU2"
/gene_synonym="39K2; 39K3"
/note="Double-stranded RNA binding motif. Binding is not
sequence specific but is highly specific for double
stranded RNA. Found in a variety of proteins including
dsRNA dependent protein kinase PKR, RNA helicases,
Drosophila staufen protein, E. coli RNase III; Region:
DSRM; cd00048"
/db_xref="CDD:28930"
misc_feature order(978..983,1104..1115,1122..1124)
/gene="STAU2"
/gene_synonym="39K2; 39K3"
/note="dsRNA binding site [nucleotide binding]; other
site"
/db_xref="CDD:28930"
misc_feature 1158..1214
/gene="STAU2"
/gene_synonym="39K2; 39K3"
/inference="non-experimental evidence, no additional
details recorded"
/note="propagated from UniProtKB/Swiss-Prot (Q9NUL3.1);
Region: Nuclear localization signal 1 (By similarity)"
misc_feature 1260..1460
/gene="STAU2"
/gene_synonym="39K2; 39K3"
/note="Double-stranded RNA binding motif. Binding is not
sequence specific but is highly specific for double
stranded RNA. Found in a variety of proteins including
dsRNA dependent protein kinase PKR, RNA helicases,
Drosophila staufen protein, E. coli RNase III; Region:
DSRM; cd00048"
/db_xref="CDD:28930"
misc_feature order(1260..1262,1278..1283,1407..1418,1425..1427)
/gene="STAU2"
/gene_synonym="39K2; 39K3"
/note="dsRNA binding site [nucleotide binding]; other
site"
/db_xref="CDD:28930"
misc_feature 1458..1577
/gene="STAU2"
/gene_synonym="39K2; 39K3"
/inference="non-experimental evidence, no additional
details recorded"
/note="propagated from UniProtKB/Swiss-Prot (Q9NUL3.1);
Region: Nuclear localization signal 2 (By similarity)"
misc_feature 1482..2051
/gene="STAU2"
/gene_synonym="39K2; 39K3"
/inference="non-experimental evidence, no additional
details recorded"
/note="propagated from UniProtKB/Swiss-Prot (Q9NUL3.1);
Region: Required for dendritic transport (By similarity)"
misc_feature 1524..1526
/gene="STAU2"
/gene_synonym="39K2; 39K3"
/experiment="experimental evidence, no additional details
recorded"
/note="Phosphoserine; propagated from UniProtKB/Swiss-Prot
(Q9NUL3.1); phosphorylation site"
misc_feature 1554..1556
/gene="STAU2"
/gene_synonym="39K2; 39K3"
/experiment="experimental evidence, no additional details
recorded"
/note="Phosphothreonine; propagated from
UniProtKB/Swiss-Prot (Q9NUL3.1); phosphorylation site"
misc_feature 1587..1589
/gene="STAU2"
/gene_synonym="39K2; 39K3"
/experiment="experimental evidence, no additional details
recorded"
/note="Phosphoserine; propagated from UniProtKB/Swiss-Prot
(Q9NUL3.1); phosphorylation site"
misc_feature 1617..1619
/gene="STAU2"
/gene_synonym="39K2; 39K3"
/experiment="experimental evidence, no additional details
recorded"
/note="Phosphoserine; propagated from UniProtKB/Swiss-Prot
(Q9NUL3.1); phosphorylation site"
misc_feature 1659..1661
/gene="STAU2"
/gene_synonym="39K2; 39K3"
/experiment="experimental evidence, no additional details
recorded"
/note="Phosphoserine; propagated from UniProtKB/Swiss-Prot
(Q9NUL3.1); phosphorylation site"
misc_feature 1704..1706
/gene="STAU2"
/gene_synonym="39K2; 39K3"
/experiment="experimental evidence, no additional details
recorded"
/note="Phosphoserine; propagated from UniProtKB/Swiss-Prot
(Q9NUL3.1); phosphorylation site"
misc_feature 1815..1817
/gene="STAU2"
/gene_synonym="39K2; 39K3"
/experiment="experimental evidence, no additional details
recorded"
/note="Phosphoserine; propagated from UniProtKB/Swiss-Prot
(Q9NUL3.1); phosphorylation site"
variation complement(345)
/gene="STAU2"
/gene_synonym="39K2; 39K3"
/replace=""
/replace="g"
/db_xref="dbSNP:372171643"
exon 456..615
/gene="STAU2"
/gene_synonym="39K2; 39K3"
/inference="alignment:Splign:1.39.8"
variation complement(501)
/gene="STAU2"
/gene_synonym="39K2; 39K3"
/replace="a"
/replace="g"
/db_xref="dbSNP:368016256"
variation complement(552)
/gene="STAU2"
/gene_synonym="39K2; 39K3"
/replace="a"
/replace="c"
/db_xref="dbSNP:376969454"
variation complement(558)
/gene="STAU2"
/gene_synonym="39K2; 39K3"
/replace="c"
/replace="t"
/db_xref="dbSNP:201896770"
variation complement(562)
/gene="STAU2"
/gene_synonym="39K2; 39K3"
/replace="c"
/replace="t"
/db_xref="dbSNP:142944780"
variation complement(597)
/gene="STAU2"
/gene_synonym="39K2; 39K3"
/replace="a"
/replace="g"
/db_xref="dbSNP:372137114"
exon 616..751
/gene="STAU2"
/gene_synonym="39K2; 39K3"
/inference="alignment:Splign:1.39.8"
variation complement(671)
/gene="STAU2"
/gene_synonym="39K2; 39K3"
/replace="c"
/replace="t"
/db_xref="dbSNP:373781707"
variation complement(672)
/gene="STAU2"
/gene_synonym="39K2; 39K3"
/replace="a"
/replace="g"
/db_xref="dbSNP:200832177"
variation complement(686)
/gene="STAU2"
/gene_synonym="39K2; 39K3"
/replace="a"
/replace="g"
/db_xref="dbSNP:115816230"
variation complement(713)
/gene="STAU2"
/gene_synonym="39K2; 39K3"
/replace="c"
/replace="t"
/db_xref="dbSNP:150527132"
variation complement(715)
/gene="STAU2"
/gene_synonym="39K2; 39K3"
/replace="a"
/replace="g"
/db_xref="dbSNP:200996921"
exon 752..911
/gene="STAU2"
/gene_synonym="39K2; 39K3"
/inference="alignment:Splign:1.39.8"
variation complement(777)
/gene="STAU2"
/gene_synonym="39K2; 39K3"
/replace="c"
/replace="t"
/db_xref="dbSNP:199731066"
variation complement(787)
/gene="STAU2"
/gene_synonym="39K2; 39K3"
/replace="a"
/replace="g"
/db_xref="dbSNP:200297530"
variation complement(831)
/gene="STAU2"
/gene_synonym="39K2; 39K3"
/replace="a"
/replace="c"
/db_xref="dbSNP:201210593"
variation complement(839)
/gene="STAU2"
/gene_synonym="39K2; 39K3"
/replace="c"
/replace="t"
/db_xref="dbSNP:201898195"
STS 888..993
/gene="STAU2"
/gene_synonym="39K2; 39K3"
/standard_name="WI-16800"
/db_xref="UniSTS:64871"
exon 912..1019
/gene="STAU2"
/gene_synonym="39K2; 39K3"
/inference="alignment:Splign:1.39.8"
variation complement(933)
/gene="STAU2"
/gene_synonym="39K2; 39K3"
/replace="a"
/replace="g"
/db_xref="dbSNP:949493"
exon 1020..1232
/gene="STAU2"
/gene_synonym="39K2; 39K3"
/inference="alignment:Splign:1.39.8"
variation complement(1041)
/gene="STAU2"
/gene_synonym="39K2; 39K3"
/replace="c"
/replace="t"
/db_xref="dbSNP:376554654"
variation complement(1073)
/gene="STAU2"
/gene_synonym="39K2; 39K3"
/replace="a"
/replace="t"
/db_xref="dbSNP:199859315"
variation complement(1087)
/gene="STAU2"
/gene_synonym="39K2; 39K3"
/replace="c"
/replace="t"
/db_xref="dbSNP:184418849"
variation complement(1130)
/gene="STAU2"
/gene_synonym="39K2; 39K3"
/replace="c"
/replace="t"
/db_xref="dbSNP:28728027"
variation complement(1136)
/gene="STAU2"
/gene_synonym="39K2; 39K3"
/replace="a"
/replace="g"
/db_xref="dbSNP:368673903"
variation complement(1145)
/gene="STAU2"
/gene_synonym="39K2; 39K3"
/replace="c"
/replace="t"
/db_xref="dbSNP:144539323"
variation complement(1178)
/gene="STAU2"
/gene_synonym="39K2; 39K3"
/replace="c"
/replace="t"
/db_xref="dbSNP:201913123"
variation complement(1179)
/gene="STAU2"
/gene_synonym="39K2; 39K3"
/replace="a"
/replace="g"
/db_xref="dbSNP:373605907"
variation complement(1190)
/gene="STAU2"
/gene_synonym="39K2; 39K3"
/replace="a"
/replace="g"
/db_xref="dbSNP:192673893"
variation complement(1210)
/gene="STAU2"
/gene_synonym="39K2; 39K3"
/replace="a"
/replace="g"
/db_xref="dbSNP:199601674"
exon 1233..1370
/gene="STAU2"
/gene_synonym="39K2; 39K3"
/inference="alignment:Splign:1.39.8"
variation complement(1235)
/gene="STAU2"
/gene_synonym="39K2; 39K3"
/replace="c"
/replace="t"
/db_xref="dbSNP:371435229"
variation complement(1236)
/gene="STAU2"
/gene_synonym="39K2; 39K3"
/replace="a"
/replace="g"
/db_xref="dbSNP:142831475"
variation complement(1268)
/gene="STAU2"
/gene_synonym="39K2; 39K3"
/replace="c"
/replace="t"
/db_xref="dbSNP:370812556"
variation complement(1272)
/gene="STAU2"
/gene_synonym="39K2; 39K3"
/replace="c"
/replace="t"
/db_xref="dbSNP:138925194"
variation complement(1327)
/gene="STAU2"
/gene_synonym="39K2; 39K3"
/replace="a"
/replace="t"
/db_xref="dbSNP:376665220"
variation complement(1335)
/gene="STAU2"
/gene_synonym="39K2; 39K3"
/replace="a"
/replace="g"
/db_xref="dbSNP:368955920"
variation complement(1348)
/gene="STAU2"
/gene_synonym="39K2; 39K3"
/replace="a"
/replace="g"
/db_xref="dbSNP:369041333"
variation complement(1351)
/gene="STAU2"
/gene_synonym="39K2; 39K3"
/replace="a"
/replace="g"
/db_xref="dbSNP:377142999"
exon 1371..1502
/gene="STAU2"
/gene_synonym="39K2; 39K3"
/inference="alignment:Splign:1.39.8"
variation complement(1381)
/gene="STAU2"
/gene_synonym="39K2; 39K3"
/replace="g"
/replace="t"
/db_xref="dbSNP:147219043"
variation complement(1434)
/gene="STAU2"
/gene_synonym="39K2; 39K3"
/replace="g"
/replace="t"
/db_xref="dbSNP:200304414"
exon 1503..1563
/gene="STAU2"
/gene_synonym="39K2; 39K3"
/inference="alignment:Splign:1.39.8"
variation complement(1511)
/gene="STAU2"
/gene_synonym="39K2; 39K3"
/replace="a"
/replace="g"
/db_xref="dbSNP:199836880"
variation complement(1512)
/gene="STAU2"
/gene_synonym="39K2; 39K3"
/replace="a"
/replace="g"
/db_xref="dbSNP:200276587"
variation complement(1542)
/gene="STAU2"
/gene_synonym="39K2; 39K3"
/replace="c"
/replace="t"
/db_xref="dbSNP:201007858"
variation complement(1543)
/gene="STAU2"
/gene_synonym="39K2; 39K3"
/replace="c"
/replace="t"
/db_xref="dbSNP:202001506"
variation complement(1553)
/gene="STAU2"
/gene_synonym="39K2; 39K3"
/replace="a"
/replace="g"
/db_xref="dbSNP:142953051"
exon 1564..1871
/gene="STAU2"
/gene_synonym="39K2; 39K3"
/inference="alignment:Splign:1.39.8"
variation complement(1568)
/gene="STAU2"
/gene_synonym="39K2; 39K3"
/replace="a"
/replace="g"
/db_xref="dbSNP:138728668"
variation complement(1583)
/gene="STAU2"
/gene_synonym="39K2; 39K3"
/replace="c"
/replace="t"
/db_xref="dbSNP:150211307"
variation complement(1620)
/gene="STAU2"
/gene_synonym="39K2; 39K3"
/replace="c"
/replace="t"
/db_xref="dbSNP:140982689"
variation complement(1665)
/gene="STAU2"
/gene_synonym="39K2; 39K3"
/replace="a"
/replace="g"
/db_xref="dbSNP:199937946"
variation complement(1669)
/gene="STAU2"
/gene_synonym="39K2; 39K3"
/replace="a"
/replace="t"
/db_xref="dbSNP:376067283"
variation complement(1679)
/gene="STAU2"
/gene_synonym="39K2; 39K3"
/replace="a"
/replace="g"
/db_xref="dbSNP:148124805"
variation complement(1680)
/gene="STAU2"
/gene_synonym="39K2; 39K3"
/replace="c"
/replace="t"
/db_xref="dbSNP:373103243"
variation complement(1685)
/gene="STAU2"
/gene_synonym="39K2; 39K3"
/replace="a"
/replace="t"
/db_xref="dbSNP:370371919"
variation complement(1705)
/gene="STAU2"
/gene_synonym="39K2; 39K3"
/replace="c"
/replace="g"
/db_xref="dbSNP:377256202"
variation complement(1709)
/gene="STAU2"
/gene_synonym="39K2; 39K3"
/replace="c"
/replace="t"
/db_xref="dbSNP:373075598"
variation complement(1711)
/gene="STAU2"
/gene_synonym="39K2; 39K3"
/replace="c"
/replace="g"
/db_xref="dbSNP:369610486"
variation complement(1728)
/gene="STAU2"
/gene_synonym="39K2; 39K3"
/replace="a"
/replace="g"
/db_xref="dbSNP:145795257"
variation complement(1734)
/gene="STAU2"
/gene_synonym="39K2; 39K3"
/replace="a"
/replace="g"
/db_xref="dbSNP:375207062"
variation complement(1750)
/gene="STAU2"
/gene_synonym="39K2; 39K3"
/replace="c"
/replace="t"
/db_xref="dbSNP:202085377"
variation complement(1776)
/gene="STAU2"
/gene_synonym="39K2; 39K3"
/replace="a"
/replace="g"
/db_xref="dbSNP:140667237"
variation complement(1806)
/gene="STAU2"
/gene_synonym="39K2; 39K3"
/replace="a"
/replace="c"
/db_xref="dbSNP:374802646"
variation complement(1812)
/gene="STAU2"
/gene_synonym="39K2; 39K3"
/replace="c"
/replace="t"
/db_xref="dbSNP:146866411"
variation complement(1826)
/gene="STAU2"
/gene_synonym="39K2; 39K3"
/replace="a"
/replace="g"
/db_xref="dbSNP:370311327"
exon 1872..1960
/gene="STAU2"
/gene_synonym="39K2; 39K3"
/inference="alignment:Splign:1.39.8"
variation complement(1876)
/gene="STAU2"
/gene_synonym="39K2; 39K3"
/replace="a"
/replace="c"
/db_xref="dbSNP:376970137"
variation complement(1878)
/gene="STAU2"
/gene_synonym="39K2; 39K3"
/replace="g"
/replace="t"
/db_xref="dbSNP:75740279"
variation complement(1904)
/gene="STAU2"
/gene_synonym="39K2; 39K3"
/replace="a"
/replace="g"
/db_xref="dbSNP:73318729"
variation complement(1920)
/gene="STAU2"
/gene_synonym="39K2; 39K3"
/replace="a"
/replace="c"
/db_xref="dbSNP:114263344"
variation complement(1923)
/gene="STAU2"
/gene_synonym="39K2; 39K3"
/replace="a"
/replace="g"
/db_xref="dbSNP:139158161"
exon 1961..3057
/gene="STAU2"
/gene_synonym="39K2; 39K3"
/inference="alignment:Splign:1.39.8"
variation complement(1985)
/gene="STAU2"
/gene_synonym="39K2; 39K3"
/replace="a"
/replace="t"
/db_xref="dbSNP:145759808"
variation complement(1988)
/gene="STAU2"
/gene_synonym="39K2; 39K3"
/replace="a"
/replace="g"
/db_xref="dbSNP:368365328"
variation complement(2045)
/gene="STAU2"
/gene_synonym="39K2; 39K3"
/replace="a"
/replace="g"
/db_xref="dbSNP:146501256"
variation complement(2048)
/gene="STAU2"
/gene_synonym="39K2; 39K3"
/replace="c"
/replace="t"
/db_xref="dbSNP:369462384"
variation complement(2071)
/gene="STAU2"
/gene_synonym="39K2; 39K3"
/replace="c"
/replace="t"
/db_xref="dbSNP:375647181"
variation complement(2098)
/gene="STAU2"
/gene_synonym="39K2; 39K3"
/replace="a"
/replace="g"
/db_xref="dbSNP:184498114"
variation complement(2106)
/gene="STAU2"
/gene_synonym="39K2; 39K3"
/replace="a"
/replace="g"
/db_xref="dbSNP:143999038"
variation complement(2348)
/gene="STAU2"
/gene_synonym="39K2; 39K3"
/replace="c"
/replace="g"
/replace="t"
/db_xref="dbSNP:72659432"
variation complement(2380)
/gene="STAU2"
/gene_synonym="39K2; 39K3"
/replace="a"
/replace="g"
/db_xref="dbSNP:192055318"
variation complement(2393..2394)
/gene="STAU2"
/gene_synonym="39K2; 39K3"
/replace=""
/replace="g"
/db_xref="dbSNP:36069340"
variation complement(2427)
/gene="STAU2"
/gene_synonym="39K2; 39K3"
/replace="a"
/replace="t"
/db_xref="dbSNP:188780480"
variation complement(2443)
/gene="STAU2"
/gene_synonym="39K2; 39K3"
/replace="c"
/replace="t"
/db_xref="dbSNP:184724066"
variation complement(2458..2459)
/gene="STAU2"
/gene_synonym="39K2; 39K3"
/replace=""
/replace="tc"
/db_xref="dbSNP:149185059"
variation complement(2460)
/gene="STAU2"
/gene_synonym="39K2; 39K3"
/replace="a"
/replace="g"
/db_xref="dbSNP:193047022"
variation complement(2552)
/gene="STAU2"
/gene_synonym="39K2; 39K3"
/replace="c"
/replace="t"
/db_xref="dbSNP:187933579"
variation complement(2694)
/gene="STAU2"
/gene_synonym="39K2; 39K3"
/replace="g"
/replace="t"
/db_xref="dbSNP:77216259"
variation complement(2696)
/gene="STAU2"
/gene_synonym="39K2; 39K3"
/replace="a"
/replace="t"
/db_xref="dbSNP:76395585"
variation complement(2697)
/gene="STAU2"
/gene_synonym="39K2; 39K3"
/replace="a"
/replace="t"
/db_xref="dbSNP:77588845"
variation complement(2699)
/gene="STAU2"
/gene_synonym="39K2; 39K3"
/replace="a"
/replace="t"
/db_xref="dbSNP:75569575"
variation complement(2721)
/gene="STAU2"
/gene_synonym="39K2; 39K3"
/replace="a"
/replace="g"
/db_xref="dbSNP:182521597"
variation complement(2756)
/gene="STAU2"
/gene_synonym="39K2; 39K3"
/replace="c"
/replace="t"
/db_xref="dbSNP:375063234"
variation complement(2797)
/gene="STAU2"
/gene_synonym="39K2; 39K3"
/replace="c"
/replace="t"
/db_xref="dbSNP:146705265"
STS 2844..2961
/gene="STAU2"
/gene_synonym="39K2; 39K3"
/standard_name="D8S1387E"
/db_xref="UniSTS:55892"
variation complement(2865)
/gene="STAU2"
/gene_synonym="39K2; 39K3"
/replace="a"
/replace="g"
/db_xref="dbSNP:16938648"
variation complement(2881)
/gene="STAU2"
/gene_synonym="39K2; 39K3"
/replace="a"
/replace="g"
/db_xref="dbSNP:192977182"
STS 2932..3057
/gene="STAU2"
/gene_synonym="39K2; 39K3"
/standard_name="RH12642"
/db_xref="UniSTS:77739"
variation complement(2967)
/gene="STAU2"
/gene_synonym="39K2; 39K3"
/replace="a"
/replace="g"
/db_xref="dbSNP:187118704"
variation complement(3035)
/gene="STAU2"
/gene_synonym="39K2; 39K3"
/replace="a"
/replace="c"
/db_xref="dbSNP:113732226"
polyA_site 3057
/gene="STAU2"
/gene_synonym="39K2; 39K3"
ORIGIN
gggagcgccggggaggcgggcggaggcgggcggaggcggggggcggggagcccgaggggtggaagccggcggcggccgagcggggtcagttctctgtagtgtttgccaatgttggagccgtctgcaaagtgtccccggcaagaagaggctgcctaccacaaggactttagcttactttttaaagattgaagaaaaaaaagaagacagaaaaagaagaactcaaagatacacaaagtaatttgaaccaaggctcagaagtttttggagccgtgagggatacagcagtttggtcaatattgtcttaacatgcttcaaataaatcagcttctctccaagataaaatggcaaacccaaaagagaaaactgcaatgtgtctggtaaatgagttagcccgtttcaatagagtccaaccccagtataaacttctgaatgaaagagggcctgctcattcaaagatgttctcagtgcagctgagtcttggtgagcagacatgggaatccgaaggcagcagtataaagaaggctcagcaggctgttgccaataaagctttgactgaatctacgcttcccaaaccagttcagaagccacccaaaagtaatgttaacaataacccaggcagtataactccaactgtggaactgaatgggcttgctatgaaaaggggagagcctgccatctacaggccattagatccaaagccattcccaaattatagagctaattacaactttcggggcatgtacaatcagaggtatcattgcccagtgcctaagatcttttatgttcagctcactgtaggaaataatgaattttttggggaaggaaagactcgacaagctgctagacacaatgctgcaatgaaagccctccaagcactgcagaatgaacctattccagaaagatctcctcagaatggtgaatcaggaaaggatgtggatgatgacaaagatgcaaataagtctgagatcagcttagtgtttgaaattgctctgaagcgaaatatgcctgtcagttttgaggttattaaagaaagtggaccaccacatatgaaaagctttgttactcgagtgtcagtaggagagttctctgcagaaggagaaggaaatagcaaaaaactctccaagaagcgcgctgcgaccaccgtcttacaggagcttaaaaaacttccacctcttcctgtggtggaaaagccaaaactattttttaaaaaacgccctaaaacaatagtaaaggccggaccagaatatggccaagggatgaaccctattagccgcctggcgcaaattcaacaggccaaaaaggaaaaggagccggattatgttttgctttcagaaagaggaatgcctcgacgtcgagaatttgtgatgcaggtgaaggtaggcaatgaagttgctacaggaacaggacctaataaaaagatagccaaaaaaaatgctgcagaagcaatgctgttacaacttggttataaagcatccactaatcttcaggatcaacttgagaagacaggggaaaacaaaggatggagtggtccaaagcctgggtttcctgaaccaacaaataatactccaaaaggaattcttcatttgtctcctgatgtttatcaagagatggaagccagccgccacaaagtaatctctggcactactctaggctatttgtcacccaaagatatgaaccaaccttcaagctctttcttcagtatatctcccacatcgaatagttcagctacaattgccagggaactccttatgaatggaacatcttctacagctgaagccataggtttaaaaggaagttctcctactcccccttgttctccagtacaaccttcaaaacaactggaatatttagcaaggattcaaggctttcaggcagccttaagtgccttgaaacaattttctgaacaaggactggatccaatcgatggagcaatgaatatcgaaaaaggttctcttgaaaaacaagccaagcatctgagagagaaagcggacaataaccaggcacccccgggctccatcgctcaggactgcaagaaatcaaactcggccgtctagcagctcccagaacccgcggctgccaccgcatccttataaacctgtcagcacgcatgagggtgtctgtgttcagggaaatgaatgactaataccattatttgagtcttatgtgaagacaacactattctaacacgagagataatatacatggtactgtttattcaactggggaaaaataaaactttgagcatttcccttggaactcgagatcagatcataactcatttgcctagaggcagcagaaatctgatcctgctactggagcttaaaataacaagtaaagaaaagtgttagaaacaaagctaaaattttaacatgattaataatagagaagttgggtttggttctgttgttatgattgttttgtcgtggtgcttgtgttcagttatattctctctctctctcatttcaaatactgcttgacaattcgaaaatgaaccaatgatgtgctgtggaatgtgatggttgtcttcatatagagtcacatggtttctctttttatgcagatatttataatcttcatcctatatcagtaggaataactataaggtgcactacaaaaagatgtatgcaaacaaacatgttttaaatcaggtcagatatctgatgaaaaatacgaactaatgttaagagcaagtagtttcaacatactccaggaactgagaaacaaaacaaagcaattgtgggttttgagctccatatactcttagcaagtaagggggcgtcttgcccctatatatcatcttcccggattccactccctgttgtgggaatcgcgcccacccccatccgtgtgttgtagccactcacggtttgcatcaagagtgttttttgtaactgcctctggacttgggacagtgagtaggatcaaaaataaataatgtacatgacggggaagggaaaaacctgttggagttgcttccagccagccacgctccgggccagcatgttggaatccagcgtggagcagatgcagtaaaaatgtggttggtttctgtgtgaaaaaaaaaa
//
ANNOTATIONS from NCBI Entrez Gene (20130726):
GeneID:27067 -> Molecular function: GO:0003725 [double-stranded RNA binding] evidence: TAS
GeneID:27067 -> Molecular function: GO:0005515 [protein binding] evidence: IPI
GeneID:27067 -> Biological process: GO:0006810 [transport] evidence: IEA
GeneID:27067 -> Cellular component: GO:0005730 [nucleolus] evidence: IEA
GeneID:27067 -> Cellular component: GO:0005783 [endoplasmic reticulum] evidence: IEA
GeneID:27067 -> Cellular component: GO:0005874 [microtubule] evidence: IEA
by
@meso_cacase at
DBCLS
This page is licensed under a Creative Commons Attribution 2.1 Japan License.