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2025-05-09 19:00:13, GGRNA : RefSeq release 60 (20130726)
LOCUS NM_020917 7502 bp mRNA linear PRI 07-JUL-2013
DEFINITION Homo sapiens ZFP14 zinc finger protein (ZFP14), mRNA.
ACCESSION NM_020917 XM_375604
VERSION NM_020917.2 GI:307133708
KEYWORDS RefSeq.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 7502)
AUTHORS Strausberg RL, Feingold EA, Grouse LH, Derge JG, Klausner RD,
Collins FS, Wagner L, Shenmen CM, Schuler GD, Altschul SF, Zeeberg
B, Buetow KH, Schaefer CF, Bhat NK, Hopkins RF, Jordan H, Moore T,
Max SI, Wang J, Hsieh F, Diatchenko L, Marusina K, Farmer AA, Rubin
GM, Hong L, Stapleton M, Soares MB, Bonaldo MF, Casavant TL,
Scheetz TE, Brownstein MJ, Usdin TB, Toshiyuki S, Carninci P,
Prange C, Raha SS, Loquellano NA, Peters GJ, Abramson RD, Mullahy
SJ, Bosak SA, McEwan PJ, McKernan KJ, Malek JA, Gunaratne PH,
Richards S, Worley KC, Hale S, Garcia AM, Gay LJ, Hulyk SW,
Villalon DK, Muzny DM, Sodergren EJ, Lu X, Gibbs RA, Fahey J,
Helton E, Ketteman M, Madan A, Rodrigues S, Sanchez A, Whiting M,
Madan A, Young AC, Shevchenko Y, Bouffard GG, Blakesley RW,
Touchman JW, Green ED, Dickson MC, Rodriguez AC, Grimwood J,
Schmutz J, Myers RM, Butterfield YS, Krzywinski MI, Skalska U,
Smailus DE, Schnerch A, Schein JE, Jones SJ and Marra MA.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 7502)
AUTHORS Nagase,T., Kikuno,R., Nakayama,M., Hirosawa,M. and Ohara,O.
TITLE Prediction of the coding sequences of unidentified human genes.
XVIII. The complete sequences of 100 new cDNA clones from brain
which code for large proteins in vitro
JOURNAL DNA Res. 7 (4), 273-281 (2000)
PUBMED 10997877
COMMENT VALIDATED REFSEQ: This record has undergone validation or
preliminary review. The reference sequence was derived from
AL699477.1, BC152446.1, AC092296.2 and H17024.1.
On Sep 17, 2010 this sequence version replaced gi:55741658.
Sequence Note: This RefSeq record was created from transcript and
genomic sequence data to make the sequence consistent with the
reference genome assembly. The genomic coordinates used for the
transcript record were based on transcript alignments.
##Evidence-Data-START##
Transcript exon combination :: AL699477.1, BC152446.1 [ECO:0000332]
RNAseq introns :: single sample supports all introns
ERS025082, ERS025083 [ECO:0000348]
##Evidence-Data-END##
PRIMARY REFSEQ_SPAN PRIMARY_IDENTIFIER PRIMARY_SPAN COMP
1-27 AL699477.1 2-28
28-3353 BC152446.1 1-3326
3354-7428 AC092296.2 23552-27626 c
7429-7502 H17024.1 1-74 c
FEATURES Location/Qualifiers
source 1..7502
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/chromosome="19"
/map="19q13.12"
gene 1..7502
/gene="ZFP14"
/gene_synonym="ZNF531"
/note="ZFP14 zinc finger protein"
/db_xref="GeneID:57677"
/db_xref="HGNC:29312"
/db_xref="HPRD:17217"
exon 1..41
/gene="ZFP14"
/gene_synonym="ZNF531"
/inference="alignment:Splign:1.39.8"
exon 42..129
/gene="ZFP14"
/gene_synonym="ZNF531"
/inference="alignment:Splign:1.39.8"
misc_feature 85..87
/gene="ZFP14"
/gene_synonym="ZNF531"
/note="upstream in-frame stop codon"
CDS 121..1722
/gene="ZFP14"
/gene_synonym="ZNF531"
/note="zfp-14; zinc finger protein 531"
/codon_start=1
/product="zinc finger protein 14 homolog"
/protein_id="NP_065968.1"
/db_xref="GI:55741659"
/db_xref="CCDS:CCDS33002.1"
/db_xref="GeneID:57677"
/db_xref="HGNC:29312"
/db_xref="HPRD:17217"
/translation="
MAHGSVTFRDVAIDFSQEEWEFLDPAQRDLYRDVMWENYSNFISLGPSISKPDVITLLDEERKEPGMVVREGTRRYCPDLESRYRTNTLSPEKDIYEIYSFQWDIMERIKSYSLQGSIFRNDWECKSKIEGEKEQQEGYFGQVKITSEKMTTYKRHNFLTEYQIVHNGEKVYECKECRKTFIRRSTLSQHLRIHTGEKPYKCKECGQAFRQRAHLIRHHKLHTGEKPYECKECGKAFTVLQELTQHQRLHTGEKPYECKECGKAFRVHQQLARHQRIHTGEKPYECKDCGKTFRQCTHLTRHQRLHTAEKLYECKECGKAFVCGPDLRVHQKIHFGEKPYECKECGKAFRICQQLTVHQSIHTGEKPYECKECGKTFRLRQQLVRHQRIHTREKPYECMECWKTFSSYSQLISHQSIHIGERPYECEECGKAFRLLSQLTQHQSIHTGEKPYECKECRKPFRLLSQLTQHQSIHTGEKPYECKECGKAFRLYSFLTQHQRIHTGEKPYKCKECKKAFRQHSHLTQHQKIHNGI
"
misc_feature 136..321
/gene="ZFP14"
/gene_synonym="ZNF531"
/note="krueppel associated box; Region: KRAB; smart00349"
/db_xref="CDD:197671"
misc_feature 136..255
/gene="ZFP14"
/gene_synonym="ZNF531"
/note="KRAB (Kruppel-associated box) domain -A box;
Region: KRAB_A-box; cd07765"
/db_xref="CDD:143639"
misc_feature 337..339
/gene="ZFP14"
/gene_synonym="ZNF531"
/experiment="experimental evidence, no additional details
recorded"
/note="phosphorylation site"
misc_feature 679..753
/gene="ZFP14"
/gene_synonym="ZNF531"
/note="Zinc-finger double domain; Region: zf-H2C2_2;
pfam13465"
/db_xref="CDD:205643"
misc_feature 712..1713
/gene="ZFP14"
/gene_synonym="ZNF531"
/note="FOG: Zn-finger [General function prediction only];
Region: COG5048"
/db_xref="CDD:34653"
misc_feature 760..834
/gene="ZFP14"
/gene_synonym="ZNF531"
/note="Zinc-finger double domain; Region: zf-H2C2_2;
pfam13465"
/db_xref="CDD:205643"
misc_feature 844..915
/gene="ZFP14"
/gene_synonym="ZNF531"
/note="Zinc-finger double domain; Region: zf-H2C2_2;
pfam13465"
/db_xref="CDD:205643"
misc_feature 931..1005
/gene="ZFP14"
/gene_synonym="ZNF531"
/note="Zinc-finger double domain; Region: zf-H2C2_2;
pfam13465"
/db_xref="CDD:205643"
misc_feature 1012..1089
/gene="ZFP14"
/gene_synonym="ZNF531"
/note="Zinc-finger double domain; Region: zf-H2C2_2;
pfam13465"
/db_xref="CDD:205643"
misc_feature 1096..1167
/gene="ZFP14"
/gene_synonym="ZNF531"
/note="Zinc-finger double domain; Region: zf-H2C2_2;
pfam13465"
/db_xref="CDD:205643"
misc_feature 1183..1251
/gene="ZFP14"
/gene_synonym="ZNF531"
/note="Zinc-finger double domain; Region: zf-H2C2_2;
pfam13465"
/db_xref="CDD:205643"
misc_feature 1519..1587
/gene="ZFP14"
/gene_synonym="ZNF531"
/note="Zinc-finger double domain; Region: zf-H2C2_2;
pfam13465"
/db_xref="CDD:205643"
misc_feature 1603..1677
/gene="ZFP14"
/gene_synonym="ZNF531"
/note="Zinc-finger double domain; Region: zf-H2C2_2;
pfam13465"
/db_xref="CDD:205643"
exon 130..256
/gene="ZFP14"
/gene_synonym="ZNF531"
/inference="alignment:Splign:1.39.8"
exon 257..355
/gene="ZFP14"
/gene_synonym="ZNF531"
/inference="alignment:Splign:1.39.8"
exon 356..7493
/gene="ZFP14"
/gene_synonym="ZNF531"
/inference="alignment:Splign:1.39.8"
STS 3435..3476
/gene="ZFP14"
/gene_synonym="ZNF531"
/standard_name="SHGC-67307"
/db_xref="UniSTS:89991"
STS 3881..5459
/gene="ZFP14"
/gene_synonym="ZNF531"
/standard_name="D3S1673"
/db_xref="UniSTS:148450"
STS 3894..5454
/gene="ZFP14"
/gene_synonym="ZNF531"
/standard_name="L17705"
/db_xref="UniSTS:66091"
STS 3894..5437
/gene="ZFP14"
/gene_synonym="ZNF531"
/standard_name="L17877"
/db_xref="UniSTS:61334"
STS 3895..5577
/gene="ZFP14"
/gene_synonym="ZNF531"
/standard_name="GDB:312794"
/db_xref="UniSTS:30247"
STS 3901..5437
/gene="ZFP14"
/gene_synonym="ZNF531"
/standard_name="L17809"
/db_xref="UniSTS:39087"
variation 4457
/gene="ZFP14"
/gene_synonym="ZNF531"
/replace="a"
/replace="t"
/db_xref="dbSNP:1129375"
variation 4631
/gene="ZFP14"
/gene_synonym="ZNF531"
/replace="c"
/replace="t"
/db_xref="dbSNP:1129376"
STS 5428..5558
/gene="ZFP14"
/gene_synonym="ZNF531"
/db_xref="UniSTS:9484"
STS 5569..6163
/gene="ZFP14"
/gene_synonym="ZNF531"
/standard_name="PMC156606P1"
/db_xref="UniSTS:271408"
STS 5569..5658
/gene="ZFP14"
/gene_synonym="ZNF531"
/standard_name="PMC156606P1"
/db_xref="UniSTS:271408"
STS 5643..5963
/gene="ZFP14"
/gene_synonym="ZNF531"
/standard_name="D3S1673"
/db_xref="UniSTS:148450"
STS 5658..6888
/gene="ZFP14"
/gene_synonym="ZNF531"
/standard_name="L17971"
/db_xref="UniSTS:43966"
variation 5944
/gene="ZFP14"
/gene_synonym="ZNF531"
/replace="a"
/replace="g"
/db_xref="dbSNP:2918366"
STS 5987..6974
/gene="ZFP14"
/gene_synonym="ZNF531"
/standard_name="D15S1477"
/db_xref="UniSTS:474482"
STS 5987..6114
/gene="ZFP14"
/gene_synonym="ZNF531"
/standard_name="D15S1477"
/db_xref="UniSTS:474482"
STS 6020..6968
/gene="ZFP14"
/gene_synonym="ZNF531"
/standard_name="D8S2279"
/db_xref="UniSTS:473907"
STS 6020..6108
/gene="ZFP14"
/gene_synonym="ZNF531"
/standard_name="D8S2279"
/db_xref="UniSTS:473907"
variation 6135
/gene="ZFP14"
/gene_synonym="ZNF531"
/replace="a"
/replace="g"
/db_xref="dbSNP:2918367"
STS 6161..6802
/gene="ZFP14"
/gene_synonym="ZNF531"
/standard_name="L17877"
/db_xref="UniSTS:61334"
STS 6881..6968
/gene="ZFP14"
/gene_synonym="ZNF531"
/standard_name="D8S2279"
/db_xref="UniSTS:473907"
STS 7337..7479
/gene="ZFP14"
/gene_synonym="ZNF531"
/standard_name="WI-16083"
/db_xref="UniSTS:47957"
STS 7367..7468
/gene="ZFP14"
/gene_synonym="ZNF531"
/standard_name="G59727"
/db_xref="UniSTS:137025"
ORIGIN
gcagttctttccggcttcgctgctggtgtcggctccgagagctctggcttatcaggactccatagttctccaacagagaaatcttgaaaaggactgaccagtttttgcagttctaaaaccatggcccatggttcagtgacattcagggatgtggccatagacttctcacaggaagaatgggaattcctggatcctgctcagagggacttatatagggatgtaatgtgggagaactacagcaacttcatttcactaggaccttccatttctaaaccagatgtgattaccttattggatgaagaaaggaaggaacctgggatggttgtgagggaagggacaagaagatactgccctgatttggagtccagatacaggaccaatactttatctccagaaaaggacatttatgaaatatattcatttcagtgggatataatggaaagaattaaaagctatagccttcagggttccatttttaggaatgattgggaatgcaaaagcaagattgagggggaaaaggaacaacaagagggatattttgggcaagtgaaaattacctctgaaaaaatgaccacttacaaaaggcacaattttcttactgagtatcagatcgttcataatggagaaaaggtgtatgagtgtaaggagtgtaggaagacctttattcgtcgctcaacacttagtcaacacctgagaattcatactggtgagaaaccttataagtgtaaggaatgtgggcaggcctttagacagcgtgcacatcttattcgacatcacaaacttcacaccggtgagaaaccctatgaatgtaaggagtgtgggaaggcctttacagtgctccaagaacttactcaacatcagagacttcatacgggtgaaaaaccctatgaatgtaaggaatgtggaaaggcctttagagtacatcagcaactggctcgacatcagagaattcacactggtgagaaaccctatgaatgtaaggactgtggaaagacctttagacagtgtacacaccttacacgccatcagagacttcatactgctgaaaagctctatgaatgtaaggaatgtgggaaagccttcgtatgtggtccagaccttagagtacatcagaaaattcattttggtgagaaaccctatgaatgtaaggagtgtggaaaggcttttagaatatgccaacaacttactgttcatcagagtattcatactggtgagaaaccctacgaatgtaaggaatgtgggaagacttttagattaagacaacaactagttcgccatcagagaatacatactcgtgagaaaccctatgaatgtatggaatgttggaagacctttagtagttactcacagcttatttcacaccagagcattcatattggtgagagaccctatgaatgtgaagagtgtggaaaggcctttagactgctctcacaacttactcagcatcaaagtattcacactggtgagaaaccttatgaatgtaaggaatgtagaaaaccttttagactgctctcacaacttacccaacatcagagtattcacactggtgagaaaccttatgaatgtaaggaatgtggtaaggcttttagactttattcatttcttactcaacaccagagaattcatactggtgagaagccctacaagtgtaaggagtgtaagaaggcctttagacagcattcacaccttactcagcatcagaagattcataatggaatttaatagaagaaagccttcaaatgtatatgatgttacagaacatcagaaaattcatttttgagaaaatgtgtttcatgctcaattccaagcataataaattttatattagagaaagaatatgttgatttaaaagccttccaacaccatttaaacatggtttatcttcagcaaattcctatgagagaataatgtaatgaatgtaggaaaatctttagccttatctgtcattatctccctttctccacttgattaccagtttgatttattggacaagatactaagcttctgtgcctcattttgctgacttgtaaaatggtaataatagtacttatatgtattagttatttattgctgcgtaataaattaccacagacttagtagcataaaataacatataattatatcttataatttggatcaggagtataggcatgacttagttgggtcctctgcttcagggtctcttgcaaggctacagatttcagccagggctgaggtctcatctgaaggctcaactggggaaggatccacatccagactaacatagttgttacccaatgtatttccgtgaggcctgttgcattgagattctcagtttctagctggctgttggctgaacgctgactgcagctcctggccacaatagcctcatcaacatggctgcttgcttcatcaaggcatgcaagccaaaagggaggacagtctgctagcaagatggaagttaccatcttgtgtaatctaatcatggaagtaacattccctcaccttctactggtagaagtaagttactaggatagtccacactcaagagaacgggatgatacaagagtgtgaataagtcctggagacaggaccactggggggcctgtttagagtcagcctgccacactgtggaataggattgttgcaaggagtaagtagttaatacttggaggaatcacagtcatatagcatgtattctgtaaatattatctgtaattgttattattgtcattagtattagtgaattcacgtaaaaggaagatctgtagacataataaatgtagaaatgcctcctgtcacctctcagaaattattaaacataatttattctaggtaaaatttagattgtagtgaatgtaggaagttcttcagcacttgagctgcattagaaatttcatgccaaaaatgaatttcatgaatgtgaggtcactagtaatacagctgttgaagaattagagggaaataggaaatgattttcccataattccagaaagcaaaaggcttacaatccctgttgtctgaccacagtttaaaattaattagaaactatcaaaaatgtggcttaaaagaaattaaccacctaggaatttaatattgttgtgtatatttatgtgtgtgtataaaactcctgtgggaaagaaacaaaacatcattctataagtcagtatacttttggatgctcaaaatgccatatcttcaaccagtaggagttgtttcaagttgagtttttgatgtgatcccaccaataatttgatagtttacttgattgtggctgcataatttggtaacctatgaaagatgctagagcaccaatgtataatttttttgagacagggtgtcactttgtcccccaggctggagtgcagtggtacaagcacagttcactgtaccctgttcctcctgggctcaagtgattcttccacctaaattttttttttttttttagagaaagggtctcactatgttgcccaggctggtcttgaacttctgggctcaagtgatcctccctccttggcctccaaaggtgctggggttacaggtatgagccaccacacccagcccaactcattattcttgaaatcaataaatcagaggaaaaattgtcatttagtttccttttcccatgtgaaccaaatttcagggtcaccagaagttcatcaaattcaaatgaatttggcctggcacaggggtcacacctgtaatcccagcactttgggaggacaaggtgggtggatcacttgaggccaggagtttgagaccaacctggttaacatggtgaaaccctgtctgtactaaaaatacaaaatttagccaggcatggtggcacacacctgtagtcccaggctgaggtgggaggatcacttgaacccaagaggcagagtttgcagtgagctgagatcgtgccactgcactccagcctgggtgacagagtgagaccctgtctcaaaaaaaaaatttgttttttgaatgggtttttcttttttgaagaagtctaataaatctagaaggaattagaggattagaaaaatcaccattttctagaccttaatggaataatgggtccagaaaacatgatcttcaatgggtactacaactaataggtgaaatattttatagcgagatttttatggtggatctatcaaactggccacctctgaaccctttgatctgttttaaccttaataaaaatgggtctatcagacaacacacttcctgacgtaatgcaataggaagtccacaccaccatctacaaagccttattgctggaataatgaactgaaagcagacagggactagatgaacagtatatggtcatcccttggtatccatggggaattggttccaggatcctccactgatggtaaaatctgaggatgctcaagtcccttgtataaaatggcatagtatgtatttgcatattacctactcacatcttcctgtatactttaaattatctttagatcacttatacctatcacaatgtaaatactatgtaaatagttgttatactgtatttttcaatttgcattatttttattgtattttatttttattgtttttttttgagtattttctatttgagattggttgaatctgcacatatggagggctggctataaagggcaccacaaggaagaagccaaacagatccagaatgtgtgaaattctacagagcaaattacctgatttcttcaactaacaggtagcatgaaaatacaaggggaagggcaaccattaacagattaaaagagacttaaagagacatatcaactaaattcagtatgttggcattacttggacctggtttgaacaaaacataaaaagccattttggagacagtgagggaagtgtggacatggactaaatattaaatgatatttacatatattaatttggttagggattatgtcagtgtgattataaaaaataaaagatcgtatgatatgagatacatactatgaaatgaagatagacacatttggattaaaatattctagcaaaagaaataattggcaaagagagctggaaactaaattggcaacatgttgataatttaagtggagtgttttgttcatggagacttattgttctaatatttctacttttgtatgtgtttgaaatttcaataataaaatgtttaaaatcaaaaccaaaattatagactatgtagaaatgaatgacagtgagatgcctgcacatctaaccttgtcagatataatcaaagttctgttcagtgacaaattaatgccctgtaatgtggtaaggaaatcttatttgtggatacagtcttcatcttcttcacttacccacagcagcaacaccaggcctgtcacacagatgaatgtgttgagggaatgaataagtatttccgtcaagaaaaaggaaacaacaaaataaaaccaacccaagtaaagaacagccaagtggccaggtgcggtggctcatgcctgtaatcccagcactttgggaggccatggcaggtggatcacctgaggtcgggattttgagaccagcctgaccaacactgagaaaccccatctctattaaagatacaaaattagccaggcatggtggtgcatgcctgtaatcccagctacttgggaggctaaggcaggagaatcacttgaatccaggaggcggagtttgtggtgagttgagatcgcgccactgcactccagcctgggtaacagagcaagagtctgtcaaaaaaaaaaaaaaaaaaaaaggaacagccaagtaacagtagaaagtagaaattaagagaatggagaatattagacttgattcaatgttaatagtgattagattttggcagttataatcaaggaagagaaaatgaaagataatacatttagagtattaatgatgataaaagagacacaactctagattatatcaagcagatttttaaaattataaggcaaaactaggccgggcacagtggctcacacctgtaaccccagcactttgggaggccgaggtgggtggatcacttgaagtcaggagttcgagaccagcctgaccaacatagcaaaaccccatctctactaaaaatacaaaaattagcctgtcatggtggcgggcacctgtaatctaagctactggggagcctgaggcaggagaattgcttgaacccaggaggcagaggttgcggtgaaccaagatcacgccactgcactccagcctgggtgacagagtgagaacctgtctcaaaaataataaacataatatggtaaaactatacatgcacacatgcacaaacgtgtatattcattccagtacaagtaaaaatgtaggattgcatttttcccccaaaaggaatatgttttacaattaactcaccgtataacccaaatagattaacaaaaaatgtgtgtgtgtgtgtgtgtgtgtgaactccctgtttaaaaaatctgatacttataaaaactttaaggaatagataatcctaaagattttaccaattaattctgcaaggtaaaataatcctaataaaaattagatgaagatagtttctgaaagcaaattctagaccaccttcattatgaagattctatttttcacaattctaaataaagtttatttagaatttattacaaaatctatctttgctaataggtcagtgtttcttttcccaagcaccaaatacctccagaaagcctgtgtttgacccctaaattcaacattctccagaagtttgcttcaaggaatattaattctcgatggtatttgaaaaaaagatttcttgggaaaataggcaaatgaagcaaaacataaaacatctacttttggccaggcacggtggctcacgcctgtaatcccaacattttgggaggccaaggcgagcagatcacttgaggtcaggagtttgagaccagcctggccaacatggtgaaaccctgtctctactaaaaatacaaaattagctgggcgtggtggcttgcacctgtaatcccagctacttgggaggctgaggcaggagaattgcttgaacccaggaaatggagattgcagtgagctgagattttgccattgcactccaacctgggcaacaagagtgaaactcagtctcaaataaaataaaataaaaatctacttttgaggaattcaaagtatacatgatcagtttgccaaagatttagtaaagacatttttatttaactgagtgtatctcaaatttattgtggaattctcagtccgaatatctggaataggaacagctttgttagatgctaccataaccacaatgaatgtcttcaagggtgtaattttagatatggtgagtggttgtgttgggggcggcataagtcagggcaattttttgcagctcatatcatgctctgaaagtagctacctgctttaatggatggttagtgcttttctatagaatggaaaagattccagcccgatccttgatatgtttgtgttaaacatgcttatatattatattaaacaatgattaaggacataaatgagtttctgtggtaataaagatgctatattgaatatcaaaaaaaaaa
//
ANNOTATIONS from NCBI Entrez Gene (20130726):
GeneID:57677 -> Molecular function: GO:0003677 [DNA binding] evidence: IEA
GeneID:57677 -> Molecular function: GO:0046872 [metal ion binding] evidence: IEA
GeneID:57677 -> Biological process: GO:0006351 [transcription, DNA-dependent] evidence: IEA
GeneID:57677 -> Biological process: GO:0006355 [regulation of transcription, DNA-dependent] evidence: IEA
GeneID:57677 -> Cellular component: GO:0005634 [nucleus] evidence: IEA
by
@meso_cacase at
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