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2025-05-09 18:49:27, GGRNA : RefSeq release 60 (20130726)
LOCUS NM_001172411 8685 bp mRNA linear PRI 17-APR-2013
DEFINITION Homo sapiens VANGL planar cell polarity protein 1 (VANGL1),
transcript variant 3, mRNA.
ACCESSION NM_001172411
VERSION NM_001172411.1 GI:289547193
KEYWORDS RefSeq.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 8685)
AUTHORS Anastas,J.N., Biechele,T.L., Robitaille,M., Muster,J.,
Allison,K.H., Angers,S. and Moon,R.T.
TITLE A protein complex of SCRIB, NOS1AP and VANGL1 regulates cell
polarity and migration, and is associated with breast cancer
progression
JOURNAL Oncogene 31 (32), 3696-3708 (2012)
PUBMED 22179838
REMARK GeneRIF: NOS1AP colocalizes with both SCRIB and VANGL1 along
cellular protrusions in metastatic breast cancer cells, but does
not colocalize with either SCRIB or VANGL1 at cell junctions in
normal breast cells
REFERENCE 2 (bases 1 to 8685)
AUTHORS Lee,S., Song,Y.A., Park,Y.L., Cho,S.B., Lee,W.S., Lee,J.H.,
Chung,I.J., Kim,K.K., Rew,J.S. and Joo,Y.E.
TITLE Expression of KITENIN in human colorectal cancer and its relation
to tumor behavior and progression
JOURNAL Pathol. Int. 61 (4), 210-220 (2011)
PUBMED 21418393
REMARK GeneRIF: KITENIN is associated with human colorectal cancer
progression including invasion and metastasis.
REFERENCE 3 (bases 1 to 8685)
AUTHORS Iliescu,A., Gravel,M., Horth,C., Apuzzo,S. and Gros,P.
TITLE Transmembrane topology of mammalian planar cell polarity protein
Vangl1
JOURNAL Biochemistry 50 (12), 2274-2282 (2011)
PUBMED 21291170
REMARK GeneRIF: a compact membrane-associated portion with very short
predicted extra- and intracellular loops, while the protein harbors
a large intracellular domain
REFERENCE 4 (bases 1 to 8685)
AUTHORS Iliescu,A., Gravel,M., Horth,C., Kibar,Z. and Gros,P.
TITLE Loss of membrane targeting of Vangl proteins causes neural tube
defects
JOURNAL Biochemistry 50 (5), 795-804 (2011)
PUBMED 21142127
REMARK GeneRIF: Loss of membrane targeting of Vangl1 and Vangl2 proteins
causes neural tube defects.
REFERENCE 5 (bases 1 to 8685)
AUTHORS Ryu,H.S., Park,Y.L., Park,S.J., Lee,J.H., Cho,S.B., Lee,W.S.,
Chung,I.J., Kim,K.K., Lee,K.H., Kweon,S.S. and Joo,Y.E.
TITLE KITENIN is associated with tumor progression in human gastric
cancer
JOURNAL Anticancer Res. 30 (9), 3479-3486 (2010)
PUBMED 20944126
REMARK GeneRIF: KITENIN plays an important role in human gastric cancer
progression by AP-1 activation.
REFERENCE 6 (bases 1 to 8685)
AUTHORS Kalabis,J., Rosenberg,I. and Podolsky,D.K.
TITLE Vangl1 protein acts as a downstream effector of intestinal trefoil
factor (ITF)/TFF3 signaling and regulates wound healing of
intestinal epithelium
JOURNAL J. Biol. Chem. 281 (10), 6434-6441 (2006)
PUBMED 16410243
REMARK GeneRIF: VANGL protein may serve as an effector mediating the
intestinal trefoil factor (ITF) healing response of the intestinal
mucosa.
REFERENCE 7 (bases 1 to 8685)
AUTHORS Doudney,K., Ybot-Gonzalez,P., Paternotte,C., Stevenson,R.E.,
Greene,N.D., Moore,G.E., Copp,A.J. and Stanier,P.
TITLE Analysis of the planar cell polarity gene Vangl2 and its
co-expressed paralogue Vangl1 in neural tube defect patients
JOURNAL Am. J. Med. Genet. A 136 (1), 90-92 (2005)
PUBMED 15952208
REMARK Erratum:[Am J Med Genet A. 2005 Nov 1;138(4):415]
REFERENCE 8 (bases 1 to 8685)
AUTHORS Lee,J.H., Park,S.R., Chay,K.O., Seo,Y.W., Kook,H., Ahn,K.Y.,
Kim,Y.J. and Kim,K.K.
TITLE KAI1 COOH-terminal interacting tetraspanin (KITENIN), a member of
the tetraspanin family, interacts with KAI1, a tumor metastasis
suppressor, and enhances metastasis of cancer
JOURNAL Cancer Res. 64 (12), 4235-4243 (2004)
PUBMED 15205336
REFERENCE 9 (bases 1 to 8685)
AUTHORS Yagyu,R., Hamamoto,R., Furukawa,Y., Okabe,H., Yamamura,T. and
Nakamura,Y.
TITLE Isolation and characterization of a novel human gene, VANGL1, as a
therapeutic target for hepatocellular carcinoma
JOURNAL Int. J. Oncol. 20 (6), 1173-1178 (2002)
PUBMED 12011995
REFERENCE 10 (bases 1 to 8685)
AUTHORS Katoh,M.
TITLE Molecular cloning and characterization of Strabismus 2 (STB2)
JOURNAL Int. J. Oncol. 20 (5), 993-998 (2002)
PUBMED 11956595
REMARK GeneRIF: Molecular cloning and characterization of Strabismus 2
COMMENT REVIEWED REFSEQ: This record has been curated by NCBI staff. The
reference sequence was derived from BM146608.1, AF481859.1 and
AL450389.12.
Summary: This gene encodes a member of the tretraspanin family. The
encoded protein may be involved in mediating intestinal trefoil
factor induced wound healing in the intestinal mucosa. Mutations in
this gene are associated with neural tube defects. Alternate
splicing results in multiple transcript variants. [provided by
RefSeq, Feb 2010].
Transcript Variant: This variant (3) uses an alternate in-frame
splice site in the coding region, compared to variant 1. The
encoded isoform (2) is shorter, compared to isoform 1.
Sequence Note: This RefSeq record was created from transcript and
genomic sequence data to make the sequence consistent with the
reference genome assembly. The genomic coordinates used for the
transcript record were based on transcript alignments.
Publication Note: This RefSeq record includes a subset of the
publications that are available for this gene. Please see the Gene
record to access additional publications.
##Evidence-Data-START##
Transcript exon combination :: AF481859.1 [ECO:0000332]
RNAseq introns :: mixed/partial sample support
ERS025081, ERS025085 [ECO:0000350]
##Evidence-Data-END##
COMPLETENESS: complete on the 3' end.
PRIMARY REFSEQ_SPAN PRIMARY_IDENTIFIER PRIMARY_SPAN COMP
1-38 BM146608.1 2-39
39-1877 AF481859.1 1-1839
1878-8685 AL450389.12 54841-61648
FEATURES Location/Qualifiers
source 1..8685
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/chromosome="1"
/map="1p13.1"
gene 1..8685
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/note="VANGL planar cell polarity protein 1"
/db_xref="GeneID:81839"
/db_xref="HGNC:15512"
/db_xref="MIM:610132"
exon 1..134
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/inference="alignment:Splign:1.39.8"
variation 46
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="c"
/replace="g"
/db_xref="dbSNP:116216703"
variation 48
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="a"
/replace="c"
/db_xref="dbSNP:191609592"
exon 135..342
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/inference="alignment:Splign:1.39.8"
variation 157
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="c"
/replace="g"
/db_xref="dbSNP:181583261"
misc_feature 206..208
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/note="upstream in-frame stop codon"
variation 217
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="a"
/replace="g"
/db_xref="dbSNP:371591397"
variation 234
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="a"
/replace="g"
/db_xref="dbSNP:78368849"
variation 240
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="c"
/replace="g"
/db_xref="dbSNP:371100144"
variation 243
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="c"
/replace="t"
/db_xref="dbSNP:375618149"
variation 254
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="c"
/replace="t"
/db_xref="dbSNP:185393860"
CDS 272..1840
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/note="isoform 2 is encoded by transcript variant 3;
strabismus 2; KAI1 C-terminal interacting tetraspanin;
vang-like protein 1; van Gogh-like protein 1; loop-tail
protein 2 homolog; vang-like 1 (van gogh, Drosophila)"
/codon_start=1
/product="vang-like protein 1 isoform 2"
/protein_id="NP_001165882.1"
/db_xref="GI:289547194"
/db_xref="CCDS:CCDS53350.1"
/db_xref="GeneID:81839"
/db_xref="HGNC:15512"
/db_xref="MIM:610132"
/translation="
MDTESTYSGYSYYSSHSKKSHRQGERTRERHKSPRNKDGRGSEKSVTIQPPTGEPLLGNDSTRTEEDDNWGETTTAITGTSEHSISQEDIARISKDMEDSVGLDCKRYLGLTVASFLGLLVFLTPIAFILLPPILWRDELEPCGTICEGLFISMAFKLLILLIGTWALFFRKRRADMPRVFVFRALLLVLIFLFVVSYWLFYGVRILDSRDRNYQGIVQYAVSLVDALLFIHYLAIVLLELRQLQPMFTLQVVRSTDGESRFYSLGHLSIQRAALVVLENYYKDFTIYNPNLLTASKFRAAKHMAGLKVYNVDGPSNNATGQSRAMIAAAARRRDSSHNELYYEEAEHERRVKKRKARLVVAVEEAFIHIQRLQAEEQQKAPGEVMDPREAAQAIFPSMARALQKYLRITRQQNYHSMESILQHLAFCITNGMTPKAFLERYLSAGPTLQYDKDRWLSTQWRLVSDEAVTNGLRDGIVFVLKCLDFSLVVNVKKIPFIILSEEFIDPKSHKFVLRLQSETSV
"
misc_feature 338..1837
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/note="Strabismus protein; Region: Strabismus; pfam06638"
/db_xref="CDD:148316"
misc_feature 617..679
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/inference="non-experimental evidence, no additional
details recorded"
/note="propagated from UniProtKB/Swiss-Prot (Q8TAA9.1);
transmembrane region"
misc_feature 719..781
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/inference="non-experimental evidence, no additional
details recorded"
/note="propagated from UniProtKB/Swiss-Prot (Q8TAA9.1);
transmembrane region"
misc_feature 812..874
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/inference="non-experimental evidence, no additional
details recorded"
/note="propagated from UniProtKB/Swiss-Prot (Q8TAA9.1);
transmembrane region"
misc_feature 932..994
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/inference="non-experimental evidence, no additional
details recorded"
/note="propagated from UniProtKB/Swiss-Prot (Q8TAA9.1);
transmembrane region"
variation 307
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="c"
/replace="g"
/db_xref="dbSNP:371629555"
variation 338
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="c"
/replace="g"
/db_xref="dbSNP:374630481"
exon 343..469
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/inference="alignment:Splign:1.39.8"
variation 344
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="a"
/replace="g"
/db_xref="dbSNP:61734296"
variation 348
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="a"
/replace="g"
/db_xref="dbSNP:143990097"
variation 369
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="c"
/replace="t"
/db_xref="dbSNP:78535164"
variation 371
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="c"
/replace="t"
/db_xref="dbSNP:372052239"
variation 374
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="c"
/replace="t"
/db_xref="dbSNP:375505955"
variation 375
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="a"
/replace="g"
/db_xref="dbSNP:369543626"
variation 385
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="c"
/replace="t"
/db_xref="dbSNP:201840785"
variation 422
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="c"
/replace="t"
/db_xref="dbSNP:200391853"
exon 470..1077
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/inference="alignment:Splign:1.39.8"
variation 496
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="a"
/replace="g"
/db_xref="dbSNP:186509771"
variation 503
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="a"
/replace="t"
/db_xref="dbSNP:139472200"
variation 510
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="c"
/replace="t"
/db_xref="dbSNP:371028647"
variation 513
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="c"
/replace="t"
/db_xref="dbSNP:146695372"
variation 514
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="a"
/replace="g"
/db_xref="dbSNP:146495414"
STS 530..1529
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/standard_name="Vangl1"
/db_xref="UniSTS:532467"
variation 534
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="a"
/replace="g"
/db_xref="dbSNP:374024136"
variation 539
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="a"
/replace="g"
/db_xref="dbSNP:143196463"
variation 550
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="c"
/replace="t"
/db_xref="dbSNP:140451005"
variation 572
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="a"
/replace="g"
/db_xref="dbSNP:147048524"
variation 577
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="c"
/replace="g"
/db_xref="dbSNP:146723580"
variation 588
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="a"
/replace="g"
/db_xref="dbSNP:141673853"
variation 595
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="c"
/replace="t"
/db_xref="dbSNP:41275546"
variation 607
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="c"
/replace="t"
/db_xref="dbSNP:141525464"
variation 608
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="a"
/replace="g"
/db_xref="dbSNP:370292117"
variation 610
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="c"
/replace="t"
/db_xref="dbSNP:79828493"
variation 611
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="a"
/replace="c"
/replace="g"
/db_xref="dbSNP:4839469"
variation 662
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="c"
/replace="t"
/db_xref="dbSNP:141482063"
variation 670
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="a"
/replace="g"
/db_xref="dbSNP:200325939"
variation 700
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="c"
/replace="t"
/db_xref="dbSNP:34768472"
variation 747
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="a"
/replace="t"
/db_xref="dbSNP:201871883"
variation 757
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="c"
/replace="t"
/db_xref="dbSNP:372165510"
variation 775
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="c"
/replace="t"
/db_xref="dbSNP:368383358"
variation 782
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="c"
/replace="t"
/db_xref="dbSNP:200535188"
variation 783
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="a"
/replace="g"
/db_xref="dbSNP:148341022"
variation 788
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="c"
/replace="t"
/db_xref="dbSNP:142594314"
variation 789
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="a"
/replace="g"
/db_xref="dbSNP:201441696"
variation 802
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="a"
/replace="g"
/db_xref="dbSNP:201493360"
variation 811
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="a"
/replace="g"
/db_xref="dbSNP:143094973"
variation 841
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="c"
/replace="t"
/db_xref="dbSNP:146175997"
variation 891
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="c"
/replace="t"
/db_xref="dbSNP:201593132"
variation 905
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="c"
/replace="t"
/db_xref="dbSNP:143395094"
variation 914
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="c"
/replace="g"
/db_xref="dbSNP:373384296"
variation 946
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="a"
/replace="g"
/db_xref="dbSNP:201698322"
variation 950
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="a"
/replace="g"
/db_xref="dbSNP:143956994"
variation 979
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="c"
/replace="t"
/db_xref="dbSNP:376477305"
variation 980
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="a"
/replace="g"
/db_xref="dbSNP:121918218"
variation 985
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="a"
/replace="g"
/db_xref="dbSNP:200762200"
variation 1009
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="c"
/replace="t"
/db_xref="dbSNP:148388816"
variation 1017
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="c"
/replace="t"
/db_xref="dbSNP:201630629"
variation 1030
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="c"
/replace="t"
/db_xref="dbSNP:368722418"
variation 1031
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="c"
/replace="t"
/db_xref="dbSNP:199932833"
variation 1045
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="c"
/replace="t"
/db_xref="dbSNP:373473714"
variation 1052
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="c"
/replace="t"
/db_xref="dbSNP:377435467"
variation 1072
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="c"
/replace="t"
/db_xref="dbSNP:200039235"
exon 1078..1211
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/inference="alignment:Splign:1.39.8"
variation 1086
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="a"
/replace="g"
/db_xref="dbSNP:121918219"
variation 1103
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="c"
/replace="t"
/db_xref="dbSNP:370403671"
variation 1112
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="c"
/replace="t"
/db_xref="dbSNP:139744440"
variation 1133
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="c"
/replace="t"
/db_xref="dbSNP:145309218"
variation 1149
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="a"
/replace="t"
/db_xref="dbSNP:77983133"
variation 1150
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="a"
/replace="g"
/db_xref="dbSNP:201705477"
variation 1161
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="a"
/replace="t"
/db_xref="dbSNP:142348368"
variation 1167
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="g"
/replace="t"
/db_xref="dbSNP:373814054"
variation 1186
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="c"
/replace="g"
/replace="t"
/db_xref="dbSNP:148965020"
variation 1204
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="g"
/replace="t"
/db_xref="dbSNP:367774972"
exon 1212..1344
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/inference="alignment:Splign:1.39.8"
variation 1225
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="c"
/replace="t"
/db_xref="dbSNP:143754434"
variation 1242
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="a"
/replace="g"
/db_xref="dbSNP:141396495"
variation 1248
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="c"
/replace="t"
/db_xref="dbSNP:121918220"
variation 1266
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="a"
/replace="g"
/db_xref="dbSNP:368071458"
variation 1269
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="a"
/replace="g"
/db_xref="dbSNP:199526468"
variation 1278
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="a"
/replace="c"
/db_xref="dbSNP:74117015"
variation 1289
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="a"
/replace="g"
/db_xref="dbSNP:137860752"
variation 1305
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="a"
/replace="c"
/db_xref="dbSNP:34059106"
variation 1306
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="a"
/replace="g"
/db_xref="dbSNP:149279018"
variation 1315
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="c"
/replace="t"
/db_xref="dbSNP:147220426"
exon 1345..1579
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/inference="alignment:Splign:1.39.8"
variation 1392
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="a"
/replace="g"
/db_xref="dbSNP:200389969"
variation 1431
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="a"
/replace="g"
/db_xref="dbSNP:151256445"
variation 1432
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="c"
/replace="t"
/db_xref="dbSNP:376015336"
variation 1437
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="g"
/replace="t"
/db_xref="dbSNP:140485834"
variation 1444
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="c"
/replace="t"
/db_xref="dbSNP:370067272"
variation 1454
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="a"
/replace="g"
/db_xref="dbSNP:373242373"
variation 1462
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="c"
/replace="t"
/db_xref="dbSNP:376174821"
variation 1497
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="c"
/replace="t"
/db_xref="dbSNP:369450463"
variation 1511
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="a"
/replace="g"
/db_xref="dbSNP:146596086"
variation 1523
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="a"
/replace="g"
/db_xref="dbSNP:189584852"
variation 1564
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="c"
/replace="t"
/db_xref="dbSNP:145137292"
variation 1565
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="a"
/replace="g"
/db_xref="dbSNP:143016040"
exon 1580..8685
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/inference="alignment:Splign:1.39.8"
variation 1592
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="c"
/replace="t"
/db_xref="dbSNP:371428273"
variation 1605
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="c"
/replace="t"
/db_xref="dbSNP:148199776"
variation 1606
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="a"
/replace="g"
/db_xref="dbSNP:150326572"
STS 1643..1793
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/standard_name="SHGC-75371"
/db_xref="UniSTS:73877"
variation 1709
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="a"
/replace="g"
/db_xref="dbSNP:143622439"
variation 1735
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="c"
/replace="g"
/db_xref="dbSNP:199542978"
variation 1756..1757
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace=""
/replace="c"
/db_xref="dbSNP:34903463"
variation 1756
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="g"
/replace="t"
/db_xref="dbSNP:200739468"
variation 1794
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="a"
/replace="g"
/db_xref="dbSNP:375459125"
variation 1799
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="a"
/replace="c"
/db_xref="dbSNP:140596381"
variation 1814
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="c"
/replace="t"
/db_xref="dbSNP:184905686"
variation 1815
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="a"
/replace="g"
/db_xref="dbSNP:148512517"
variation 1848
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="a"
/replace="g"
/db_xref="dbSNP:377233845"
variation 1863
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="c"
/replace="t"
/db_xref="dbSNP:202050152"
variation 1864..1865
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace=""
/replace="a"
/db_xref="dbSNP:151052987"
variation 1885
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="g"
/replace="t"
/db_xref="dbSNP:376792729"
variation 1887
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="g"
/replace="t"
/db_xref="dbSNP:190792695"
variation 1923
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="a"
/replace="t"
/db_xref="dbSNP:3811013"
variation 1956
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="c"
/replace="t"
/db_xref="dbSNP:147518221"
variation 2057
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="c"
/replace="t"
/db_xref="dbSNP:41299565"
variation 2058
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="a"
/replace="g"
/db_xref="dbSNP:183938394"
variation 2073
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="a"
/replace="g"
/db_xref="dbSNP:188834002"
variation 2126
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="c"
/replace="t"
/db_xref="dbSNP:140372918"
variation 2140
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="c"
/replace="t"
/db_xref="dbSNP:41310108"
variation 2141
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="c"
/replace="g"
/db_xref="dbSNP:193075321"
variation 2153
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="c"
/replace="t"
/db_xref="dbSNP:3811012"
variation 2223
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="c"
/replace="g"
/db_xref="dbSNP:75277108"
variation 2256
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="c"
/replace="t"
/db_xref="dbSNP:3811011"
variation 2261
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="g"
/replace="t"
/db_xref="dbSNP:183137974"
variation 2316
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="a"
/replace="c"
/db_xref="dbSNP:187145225"
variation 2345
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="a"
/replace="g"
/db_xref="dbSNP:6700610"
variation 2534
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="a"
/replace="c"
/db_xref="dbSNP:41312690"
variation 2562
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="c"
/replace="t"
/db_xref="dbSNP:191916791"
variation 2762
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="c"
/replace="t"
/db_xref="dbSNP:142123586"
variation 2864
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="g"
/replace="t"
/db_xref="dbSNP:1140940"
variation 2883
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="a"
/replace="g"
/db_xref="dbSNP:150705915"
variation 2893
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="c"
/replace="t"
/db_xref="dbSNP:184219889"
variation 2948
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="a"
/replace="g"
/db_xref="dbSNP:189281695"
variation 3023
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="a"
/replace="g"
/db_xref="dbSNP:200424846"
variation 3023
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace=""
/replace="t"
/db_xref="dbSNP:3841008"
variation 3083
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="c"
/replace="t"
/db_xref="dbSNP:192418098"
variation 3117
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="c"
/replace="t"
/db_xref="dbSNP:3204955"
variation 3236
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="a"
/replace="g"
/db_xref="dbSNP:185557879"
variation 3355
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="c"
/replace="t"
/db_xref="dbSNP:139030532"
variation 3385
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="a"
/replace="g"
/db_xref="dbSNP:117337677"
STS 3435..3626
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/standard_name="RH26190"
/db_xref="UniSTS:84486"
variation 3465
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="a"
/replace="g"
/db_xref="dbSNP:376483138"
variation 3467
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="a"
/replace="g"
/db_xref="dbSNP:149888685"
STS 3489..3613
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/standard_name="SHGC-75372"
/db_xref="UniSTS:59289"
variation 3492
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="c"
/replace="t"
/db_xref="dbSNP:146512242"
variation 3528
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="c"
/replace="t"
/db_xref="dbSNP:374184679"
variation 3581
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="a"
/replace="g"
/db_xref="dbSNP:199831777"
variation 3588
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="c"
/replace="t"
/db_xref="dbSNP:143344734"
variation 3589
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="a"
/replace="c"
/db_xref="dbSNP:3811010"
variation 3591
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="c"
/replace="g"
/db_xref="dbSNP:3811009"
variation 3612
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="a"
/replace="g"
/db_xref="dbSNP:114033235"
variation 3614..3615
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace=""
/replace="ta"
/db_xref="dbSNP:374697813"
variation 3722
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="c"
/replace="t"
/db_xref="dbSNP:190492027"
STS 3755..3942
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/standard_name="RH102185"
/db_xref="UniSTS:96519"
variation 3768
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="a"
/replace="g"
/db_xref="dbSNP:374222902"
variation 3849
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="c"
/replace="t"
/db_xref="dbSNP:181543393"
variation 3883
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="c"
/replace="t"
/db_xref="dbSNP:74117021"
variation 3961
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="a"
/replace="g"
/db_xref="dbSNP:184469057"
variation 3999
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="c"
/replace="t"
/db_xref="dbSNP:376302608"
variation 4026
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="a"
/replace="g"
/db_xref="dbSNP:375230119"
variation 4027
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="c"
/replace="t"
/db_xref="dbSNP:146730302"
polyA_signal 4129..4134
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
polyA_site 4152
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
variation 4169
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="c"
/replace="t"
/db_xref="dbSNP:188964296"
variation 4176
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="a"
/replace="g"
/db_xref="dbSNP:148944333"
variation 4191
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="g"
/replace="t"
/db_xref="dbSNP:12121158"
variation 4329
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="c"
/replace="t"
/db_xref="dbSNP:41299571"
variation 4376
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="c"
/replace="t"
/db_xref="dbSNP:377292403"
variation 4421
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="c"
/replace="t"
/db_xref="dbSNP:3811008"
variation 4484
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="c"
/replace="g"
/db_xref="dbSNP:372511903"
variation 4514
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="c"
/replace="t"
/db_xref="dbSNP:181039153"
variation 4705
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="a"
/replace="g"
/db_xref="dbSNP:114921471"
variation 4863
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="g"
/replace="t"
/db_xref="dbSNP:10923204"
variation 4917
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="g"
/replace="t"
/db_xref="dbSNP:185557143"
variation 4963
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="a"
/replace="g"
/db_xref="dbSNP:143712039"
variation 4990
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="c"
/replace="t"
/db_xref="dbSNP:148126079"
variation 4997
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="c"
/replace="t"
/db_xref="dbSNP:114196858"
variation 5096
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="a"
/replace="g"
/db_xref="dbSNP:374942113"
variation 5140
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="a"
/replace="c"
/db_xref="dbSNP:190894422"
variation 5175
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="a"
/replace="g"
/db_xref="dbSNP:61732172"
variation 5176
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="a"
/replace="g"
/db_xref="dbSNP:61732170"
variation 5217
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="c"
/replace="t"
/db_xref="dbSNP:367988126"
variation 5219
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="c"
/replace="t"
/db_xref="dbSNP:61797707"
variation 5221
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="c"
/replace="t"
/db_xref="dbSNP:61797708"
variation 5224
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="a"
/replace="g"
/db_xref="dbSNP:181008715"
variation 5249
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="c"
/replace="t"
/db_xref="dbSNP:140931431"
variation 5257
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="c"
/replace="t"
/db_xref="dbSNP:76160883"
variation 5336
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="a"
/replace="t"
/db_xref="dbSNP:4839472"
variation 5362
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="g"
/replace="t"
/db_xref="dbSNP:78917287"
variation 5384
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="c"
/replace="t"
/db_xref="dbSNP:74117023"
variation 5438
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="a"
/replace="g"
/db_xref="dbSNP:187286147"
variation 5493
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="c"
/replace="t"
/db_xref="dbSNP:146435279"
variation 5507
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="g"
/replace="t"
/db_xref="dbSNP:1128100"
variation 5582
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="a"
/replace="t"
/db_xref="dbSNP:115376031"
variation 5599..5602
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace=""
/replace="aaac"
/db_xref="dbSNP:144395099"
STS 5640..5834
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/standard_name="D1S3610"
/db_xref="UniSTS:66759"
variation 5659
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="a"
/replace="g"
/db_xref="dbSNP:139328749"
STS 5729..5903
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/standard_name="RH70098"
/db_xref="UniSTS:69412"
variation 5785
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="c"
/replace="t"
/db_xref="dbSNP:192127758"
variation 5896
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="a"
/replace="g"
/db_xref="dbSNP:183004818"
variation 5905
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="c"
/replace="t"
/db_xref="dbSNP:187382548"
polyA_signal 5909..5914
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
variation 5928
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace=""
/replace="t"
/db_xref="dbSNP:138659832"
polyA_site 5930
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
variation 5942
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="a"
/replace="c"
/db_xref="dbSNP:369489322"
variation 6054
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="g"
/replace="t"
/db_xref="dbSNP:112297385"
variation 6059
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="a"
/replace="c"
/db_xref="dbSNP:190660373"
variation 6086
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="a"
/replace="g"
/db_xref="dbSNP:147501140"
variation 6176
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="a"
/replace="t"
/db_xref="dbSNP:113030671"
variation 6187
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="c"
/replace="t"
/db_xref="dbSNP:138485279"
variation 6252
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="c"
/replace="t"
/db_xref="dbSNP:149626166"
variation 6318
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="c"
/replace="t"
/db_xref="dbSNP:17034226"
variation 6344
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="c"
/replace="t"
/db_xref="dbSNP:17034228"
variation 6470
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="a"
/replace="g"
/db_xref="dbSNP:58002309"
variation 6569
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="c"
/replace="t"
/db_xref="dbSNP:182580560"
variation 6571
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="c"
/replace="t"
/db_xref="dbSNP:144489409"
variation 6592
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="a"
/replace="c"
/db_xref="dbSNP:370211174"
variation 6628
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="c"
/replace="g"
/db_xref="dbSNP:148437823"
variation 6770
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="a"
/replace="g"
/db_xref="dbSNP:377056964"
variation 6793
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="c"
/replace="t"
/db_xref="dbSNP:369257328"
variation 6848
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="a"
/replace="t"
/db_xref="dbSNP:117347999"
variation 6875
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="c"
/replace="t"
/db_xref="dbSNP:188051509"
variation 7106
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="c"
/replace="t"
/db_xref="dbSNP:17034230"
variation 7107
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="a"
/replace="g"
/db_xref="dbSNP:75064936"
variation 7120
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="a"
/replace="c"
/db_xref="dbSNP:148451859"
variation 7126
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="c"
/replace="t"
/db_xref="dbSNP:192672583"
variation 7168
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="a"
/replace="g"
/db_xref="dbSNP:184529007"
variation 7208
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="a"
/replace="g"
/db_xref="dbSNP:10494179"
variation 7262
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="a"
/replace="c"
/db_xref="dbSNP:189009112"
variation 7284
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="c"
/replace="g"
/db_xref="dbSNP:142497673"
variation 7306
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="a"
/replace="g"
/db_xref="dbSNP:192325588"
variation 7336..7339
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace=""
/replace="actt"
/db_xref="dbSNP:111232035"
variation 7468
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="c"
/replace="t"
/db_xref="dbSNP:374395998"
variation 7473
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="g"
/replace="t"
/db_xref="dbSNP:4348723"
variation 7557
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="c"
/replace="g"
/db_xref="dbSNP:145945936"
variation 7582
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="a"
/replace="g"
/db_xref="dbSNP:371583408"
variation 7591
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="a"
/replace="g"
/db_xref="dbSNP:10801933"
variation 7644
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="c"
/replace="g"
/db_xref="dbSNP:76569370"
variation 7648
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="c"
/replace="t"
/db_xref="dbSNP:184708484"
variation 7681
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="a"
/replace="t"
/db_xref="dbSNP:4548441"
variation 7696
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="a"
/replace="g"
/db_xref="dbSNP:188827143"
variation 7835
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="a"
/replace="t"
/db_xref="dbSNP:4595366"
variation 7866
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="a"
/replace="g"
/db_xref="dbSNP:6428677"
variation 7968
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="c"
/replace="t"
/db_xref="dbSNP:181588954"
variation 8039
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="a"
/replace="t"
/db_xref="dbSNP:3811007"
variation 8052
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="a"
/replace="g"
/db_xref="dbSNP:3811006"
variation 8077
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="a"
/replace="g"
/db_xref="dbSNP:184820374"
variation 8156
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="c"
/replace="g"
/db_xref="dbSNP:139953261"
variation 8161
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="g"
/replace="t"
/db_xref="dbSNP:77318780"
variation 8253
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="a"
/replace="g"
/db_xref="dbSNP:189697580"
variation 8283
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="g"
/replace="t"
/db_xref="dbSNP:7414259"
STS 8437..8618
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/standard_name="RH99220"
/db_xref="UniSTS:85528"
variation 8449
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="c"
/replace="t"
/db_xref="dbSNP:375912178"
variation 8561
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="a"
/replace="g"
/db_xref="dbSNP:17034249"
variation 8596..8597
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace=""
/replace="c"
/db_xref="dbSNP:5777244"
variation 8602..8603
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace=""
/replace="c"
/db_xref="dbSNP:369126863"
variation 8604..8605
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace=""
/replace="c"
/db_xref="dbSNP:67579944"
polyA_signal 8664..8669
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
polyA_site 8682
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
ORIGIN
aggaagcggaaagcagcagtgcagcggcggcggcggcggggctctgcctctccaggagcccagcgcaggccgcagagccggggccgctgtgagccgagaccgcgggccgcggagctcgggcggccggcgcggagaatttgttcctgttgaagagtggctcctcttctaatttccagactccttgaggttttaggagtctggtaggtgaaattttctacctctaaggagaaacagtacctgctccttcctcaagcgcaagccctccattgctatggataccgaatccacttattctggatattcttactattcaagtcattcgaaaaaatctcacagacaaggggaaagaactagagagagacacaagtcaccccggaataaagacggcagagggtcagaaaagtctgtcaccattcaacctcccactggagagcccctgttgggaaatgattctactcggacagaggaagatgacaactggggagagaccaccacggccatcacaggcacctcggagcacagcatatcccaagaggacattgccaggatcagcaaggacatggaggacagcgtggggctggattgcaaacgctacctgggcctcaccgtcgcctcttttcttggacttctagttttcctcacccctattgccttcatccttttacctccgatcctgtggagggatgagctggagccttgtggcacaatttgtgaggggctctttatctccatggcattcaaactcctcattctgctcatagggacctgggcactttttttccgcaagcggagagctgacatgccacgggtgtttgtgtttcgtgcccttttgttggtcctcatctttctctttgtggtttcctattggcttttttacggggtccgcattttggactctcgggaccggaattaccagggcattgtgcaatatgcagtctcccttgtggatgccctcctcttcatccattacctggccatcgtcctgctggagctcaggcagctgcagcccatgttcacgctgcaggtggtccgctccaccgatggcgagtcccgcttctacagcctgggacacctgagtatccagcgagcagcattggtggtcctagaaaattactacaaagatttcaccatctataacccaaacctcctaacagcctccaaattccgagcagccaagcatatggccgggctgaaagtctacaatgtagatggccccagtaacaatgccactggccagtcccgggccatgattgctgcagctgctcggcgcagggactcaagccacaacgagttgtattatgaagaggccgaacatgaacggcgagtaaagaagcggaaagcaaggctggtggttgcagtggaagaggccttcatccacattcagcgtctccaggctgaggagcagcagaaagccccaggggaggtgatggaccctagggaggccgcccaggccattttcccctccatggccagggctctccagaagtacctgcgcatcacccggcagcagaactaccacagcatggagagcatcctgcagcacctggccttctgcatcaccaacggcatgacccccaaggccttcctagaacggtacctcagtgcgggccccaccctgcaatatgacaaggaccgctggctctctacacagtggaggcttgtcagtgatgaggctgtgactaatggattacgggatggaattgtgttcgtccttaagtgcttggacttcagcctcgtagtcaatgtgaagaaaattccattcatcatactctctgaagagttcatagaccccaaatctcacaaatttgtccttcgcttacagtctgagacatccgtttaaaagttctatatttgtggctttattaaaaaaaaaagaaaaatatatagagagatatatatctatgccagaggggtgtcttttttaaaaattcttcttcattgctgactgaaactggcagatgattgaccagtatcctttgaccatctgcactttatttggaaggaagcaggggctgtccaccctgaaaaagagtgactgatgacatctgacttttgtcgatgggacttctcaagaagccattccttggagcttctgttacagctgtaaaccaaagtggagctggtgcttcttgggagcctcgccttacaactaattcctgcctttcgtccagtaccaagtcccccgttgcttctggtcagcccacttgtagacttccaggggacacatctttattctgtttcaggaaaccagtcacgacacgtccacatatgtatttgtgtatgttaatgtccagtatcacatcacccatgaaagtcgtgggcagttcaggagatacctgccttcatctttgttctttgttgccttaggttcttcagagaaagatcacaacaaaaaatgtacactgtcgtttacagctattaagtgatttgattttgtttttttcccaaagagaaaacctacctgccctgtttctgatcccacccctctgctggcttgaagcaggtaaccctttcccagccctgcagctgcccacctggcctccatgccatcctgcccccacctggctggcagccctggctctccatgtgtgccctccggctctgtgtgaagcctcaagtcagtcccagcattgtttccatagggaagtgtggggtgcccagcaggtaaagcacagggagagagggcagtgggaatgccacctttaggctgcagcaggagccccacactgcccagttttcctccccactgttctacaccaaccaggggagactaacactgtgactctgggattggcaggtgcaacttggagccacttaatttcctggggacgtaagttcttcccaagcttagagcaagctgccctgccaaaggagaccaaaccatgccaaccacgctggcaactgctgctgtccagtccctgtgttttctgaccaccgtcactgtgcaactcatcgcctctgccacttaggaccaggaaagaggctggttttgctcccactcttagttgctgataaagtggggagaaggaaaatggacactctacagagtttggggaagggagagtagggagcccatcttgtccagaaagattcatctgtggtctgtctgttaaacacagctgatttcagtgggctttcccctggccctgggggagcagacactgactgggttgtgggcagaggagccatcctggcggagccctgctgcaggggagctccttcaggagccccatccggacctcttgcactgggctgcctttgcctccatttgccttcctgtatctgcaacaaaccttttaaaagtgttcactcttgctttttccagtatttcggtaatcagccatcttgctgtagtacaggatgacattgtcgaatgctctttgtatgtgtgcacacccccttactcccttactgcttcatacactccacaagtggtacagtattttgtgtcattgtaaaaatcaaaattggctttggatctttgtaatacacctgtacctgaaaaagtaaacaacattcttcaattactagccttcagcttgaaaagacatgctggagaagaaggaagggggaacccataggtgtggcgtggagccaagatgtactattcaactatgtgtttctgtttataaaaaacacataccatggaaccatggtgcttttgttcttagtttttgccgttagatcccttcaaactggaagttccttacaatatctttctcaggaaatattttgggaaatggggtaagagatggcaagtgtgagacgggctgtgtcagaggttgctacgtcatggatacagtgcagttccaagtgccataagtgtatgtacatatagttaataatgacactgttcatcaccattctaaaatactgttcttccaaccctatcttcaatgaccagtccagaaggggttaagctggattcatttgctctggcatgtgcattcccagcagggtgaagaaaggtttaaattaaagaatttattttctctctcccccttcctctttctcccagtctttgcataggagaatgttagacattcagaaattactgtttctgttttaaattgagtattgatttttttatattgactttgtattgagttctttttgaaagaataacaaaataaaatgcaggatctttgtaaagcctttgcactttcaacctctttatagcttgagttacttttgcagtgggaacaatgtaaatgacatttaaaagatttaaggtttcagaaagctgcatcccacaattgaacacaatgcatttttatttcaattcttggaactggtaggctattctttttaaaagggggtaaacttcgccctaaggctggtagaatgtatgttcacattatagtagacaggatttcatttgccttatatgtttatagattttttataattttcatcctacgttattaaaattagagcattgagtgttaaagaacttaatgaggagtctatatctgagattgctctcttccctggtgatgttttaactggtagataatttgttcttaaatatgtacttttgaagataggacagtttttatagtccatgaactgaatgttaaaaagttctgtatgcattctcagagaggattttaaagctatatagttcatccatcctttgcattatcaaaatgttaagtcaaatctgtaatactttggctaaaattcataaagtaagccctagagaaaatacttgaccaccaaatttttgcccaactatcatcacctcccttcccccgcctctgttcttgccttttgacatctacatggaagacaagttctttacagcaaatggtaagaggcaggtgacctggtgtgtttgctgtgttgtagttcattgcctggggcttgggactccttttttaatggagagactagctgtgcaggtgtgtgttggatagggataaagtgctcacccctgccctctctacagtagttggtggtagatttctctctcattttgcctcataatcactttcgagtgcatgtatttacctaagggctgtagctctgtgggatgctaccagcatattggactgacagaaattgattaccttgccactccaacctacgtactgagtgagtgctccagccactcagtgaaaccaacaaaagtgagtccttggtttaccttccaatctgggtcctgctgtgtaagtatccctaagtggggatgcatatttgtttgtgcgtttttatttccatatatgtgagcatttctctgagtgtattaccagacggatagcacatttatatgtcagacatcttaacatctgtgttatctgtagcaggtgtgtagctcagcagatacgtgtcattgtgtatatagctgagtgtgtgagggtgtctgtgtttctgcagtcccctgtgtttgagagatgacttaataaccctgtgttttgagaggtcgctctaaaccagtgacttttccctcccctgctttattcctttccctcactgacactggcttctcccgctagagtaaatggctttagcacagcactgtcttctggggagcctgctgtcctgcaggcaagtccattaaactctttcttgctttaggactctgaaaacagcaagaaacaaacaaacaaaggtcaagctctaagaaaattactgctcaaacttcactaccctggaagccttactagatatttcttaaggtaacttaaaaattgggctttatttttaaaaagtgataggttacttacagtagcacagaaatgttagcatatttatttaaatagtcctgcagcagagaccctgcgattgtaaagtgatttaagtatttctgggtagtgtttgtgatttacggatttgttactgaaaaacaaaaaaatcactactgtgaatttactactatgtaaccttgtggtcgtatttcattataaataaaataagaattgctcttctgcccaccgttcttgattggtattcagtgcagtagcgaaatgagatagtttagacactgttgaaataactgcattgagctttaaccaagtgtatgctcagaaaattcagttttggatcacattttgacaaaacatgttttggtcaaagaaaggaaaggctactaacacatttatcaggtaatgtatgtcacagtccgtgttccacccagccttgttatccccacattctttcaagataggagtcatcttggtttttcgggtgaaaaacggaaggtcagagaggaaggggcttgtccaaggtctcatgtctggttaacagaatttcaaactagatgtttgattctaacccctcagtccactgtaccttgaagtatggtctaaatgattcggcacttctggatgttgaggaaggacctagagacacatccttgaactagaacctggggtgagagttcattgggaggcaggatctcttctttcactttggatttacaccttgtcccttggaaagcttctccactatgctagcaaatatcttaggatatttgatggaaagaacttgagaatcccttctggaaaacccagcctttcagtgttaacacctgctgcaagacagggatgctgttgttctggcagcccccctttgcttttgcctggccccaccttctgctcccactctgctggcttgggcaagatgcgtgccttgggccttgggtgcagggaggcaggcaggggcttgacctggcctctctctggtgccatggcaacattatgccccaaacttcttccctggttggagtgagaggggctgtccacagccccatcctgtggggatctcaagccggagtccctggcctggcctccttgacgtaggtgttctcagcaagcagtttgcatcccaccgtctttctcacacttgcccccaagacttttgacagagcagacgtaaaacaggactcagaaaaccatttttctctgttcccatatgtagtaagttttgattcagttgtgcataaaccatagttttctgccctgctgtttgctttcaatggaagacagtaaagggaagatggtgctcacatctctccatgtgacatctcattaggaattaagatgcgatggattagaaatgtaaaacttcagaataaaattaaatttcagggctctataagtcccgttttcccaggtcctgttccgtttctacgtagataacccaatttgttttgtctatgaaataagcctctttagtgggttgttttagtctctccaacaaaagagcagattcctaaagccaggtgcagcactgtgaaaagtttctttcaatatggcaccaagactctaccatttatgtctctctcagcttacaaacatcagcgttttgtccttgtcatagtggaagaaagacacttactttaagctttggggacaaaggtgacaaaccccaggcttttatcttaaaagtgtctttggcacttcttttggcactgaaatggtatttgggaagcattatttgaatgtacagttgtttggttttgtatgtgcttatctttatctgagctttcacttgtagacatggccttttgttgtgaagttgctcatcatttaggagtgtttaattctaaaaagccttcagcctaagaaagcttcatctgtggggaccagagacttgttgctcagggagttagtgatgggacttgggcatctgatctgcaggtgacaagtttagttcaactgaagttgtagggaatttagacagttgcacatcattgccgttctaggggccttgtagaaagatgaaacagttgtttttcatttaccagcacctctcagttatagaggtaatggaacattcgcttacttttcatcatcattctttaaaaagggaacatacaaaaatctaaactatggcaataatttatttttataatagtttacggtaggctttaattaaatggcaaactcctctgggacccctaagttatggcgtgattagccaaatttgatttccaacagtcatttatggccataactattgcatagagtgcaggatgccagcaaagatgagggtgggggcagatactggctcagtgatttaactcacattatagatgaccccttcctcaacagaaatgctactgagagaaccagagaggcctgggccaggcaggtcttatttgagaggagattatttgataattgctttggttagaaggactttacatttcctgatttcaagtccagcaccaatttagaaagttcagagatgaaaccacctgtctttacctgacagagtcataacggtttgtgtaaaaatgtggtcagggaccttttttgttctttctgattagttaatactgtacattgtaaccaggaggggcagttttgccaaccagcctctgctcatggtcaccatatgtgtatgacaaggcctgagtgagttcctgcataaactgggtagtgggctcttttgacacatttgcaagcatgtaaatgaatgaatgacactaccagcaaccatctgtacaggtccatttacttacattcataaggtttatgctatgaaacttcttctcattgtgatgtcagtaacagagttagtgtctctgatggaatagtgtacctgtcacccaagttattttgttcctttttgggtcctccagtataatccccccctcatcccaattaactgtaaaatgttttacacatcacattttttatactgtaaacttggaaaataaactgaaatatcaaattg
//
ANNOTATIONS from NCBI Entrez Gene (20130726):
GeneID:81839 -> Molecular function: GO:0005515 [protein binding] evidence: IPI
GeneID:81839 -> Biological process: GO:0007275 [multicellular organismal development] evidence: IEA
GeneID:81839 -> Cellular component: GO:0016021 [integral to membrane] evidence: IEA
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