2025-05-09 18:34:54, GGRNA : RefSeq release 60 (20130726)
LOCUS NM_004389 4005 bp mRNA linear PRI 07-JUL-2013 DEFINITION Homo sapiens catenin (cadherin-associated protein), alpha 2 (CTNNA2), transcript variant 1, mRNA. ACCESSION NM_004389 VERSION NM_004389.3 GI:259013214 KEYWORDS RefSeq. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 4005) AUTHORS Sherva R, Tripodis Y, Bennett DA, Chibnik LB, Crane PK, de Jager PL, Farrer LA, Saykin AJ, Shulman JM and Green RC. CONSRTM The GENAROADS Consortium, and The Alzheimer's Disease Neuroimaging Initiative TITLE Genome-wide association study of the rate of cognitive decline in Alzheimer's disease JOURNAL Alzheimers Dement (2013) In press PUBMED 23535033 REMARK Publication Status: Available-Online prior to print REFERENCE 2 (bases 1 to 4005) AUTHORS Kask,M., Pruunsild,P. and Timmusk,T. TITLE Bidirectional transcription from human LRRTM2/CTNNA1 and LRRTM1/CTNNA2 gene loci leads to expression of N-terminally truncated CTNNA1 and CTNNA2 isoforms JOURNAL Biochem. Biophys. Res. Commun. 411 (1), 56-61 (2011) PUBMED 21708131 REFERENCE 3 (bases 1 to 4005) AUTHORS Terracciano,A., Esko,T., Sutin,A.R., de Moor,M.H., Meirelles,O., Zhu,G., Tanaka,T., Giegling,I., Nutile,T., Realo,A., Allik,J., Hansell,N.K., Wright,M.J., Montgomery,G.W., Willemsen,G., Hottenga,J.J., Friedl,M., Ruggiero,D., Sorice,R., Sanna,S., Cannas,A., Raikkonen,K., Widen,E., Palotie,A., Eriksson,J.G., Cucca,F., Krueger,R.F., Lahti,J., Luciano,M., Smoller,J.W., van Duijn,C.M., Abecasis,G.R., Boomsma,D.I., Ciullo,M., Costa,P.T. Jr., Ferrucci,L., Martin,N.G., Metspalu,A., Rujescu,D., Schlessinger,D. and Uda,M. TITLE Meta-analysis of genome-wide association studies identifies common variants in CTNNA2 associated with excitement-seeking JOURNAL Transl Psychiatry 1, E49 (2011) PUBMED 22833195 REMARK GeneRIF: Common variants in CTNNA2 are associated with excitement-seeking and risk-taking. Publication Status: Online-Only REFERENCE 4 (bases 1 to 4005) AUTHORS Bailey SD, Xie C, Do R, Montpetit A, Diaz R, Mohan V, Keavney B, Yusuf S, Gerstein HC, Engert JC and Anand S. CONSRTM DREAM investigators TITLE Variation at the NFATC2 locus increases the risk of thiazolidinedione-induced edema in the Diabetes REduction Assessment with ramipril and rosiglitazone Medication (DREAM) study JOURNAL Diabetes Care 33 (10), 2250-2253 (2010) PUBMED 20628086 REMARK GeneRIF: Observational study of gene-disease association, gene-environment interaction, and pharmacogenomic / toxicogenomic. (HuGE Navigator) REFERENCE 5 (bases 1 to 4005) AUTHORS Talmud PJ, Drenos F, Shah S, Shah T, Palmen J, Verzilli C, Gaunt TR, Pallas J, Lovering R, Li K, Casas JP, Sofat R, Kumari M, Rodriguez S, Johnson T, Newhouse SJ, Dominiczak A, Samani NJ, Caulfield M, Sever P, Stanton A, Shields DC, Padmanabhan S, Melander O, Hastie C, Delles C, Ebrahim S, Marmot MG, Smith GD, Lawlor DA, Munroe PB, Day IN, Kivimaki M, Whittaker J, Humphries SE and Hingorani AD. CONSRTM ASCOT investigators; NORDIL investigators; BRIGHT Consortium TITLE Gene-centric association signals for lipids and apolipoproteins identified via the HumanCVD BeadChip JOURNAL Am. J. Hum. Genet. 85 (5), 628-642 (2009) PUBMED 19913121 REMARK GeneRIF: Observational study of gene-disease association. (HuGE Navigator) REFERENCE 6 (bases 1 to 4005) AUTHORS Bogaerts,S., Vanlandschoot,A., van Hengel,J. and van Roy,F. TITLE Nuclear translocation of alphaN-catenin by the novel zinc finger transcriptional repressor ZASC1 JOURNAL Exp. Cell Res. 311 (1), 1-13 (2005) PUBMED 16182284 REFERENCE 7 (bases 1 to 4005) AUTHORS Krauss,R.S., Cole,F., Gaio,U., Takaesu,G., Zhang,W. and Kang,J.S. TITLE Close encounters: regulation of vertebrate skeletal myogenesis by cell-cell contact JOURNAL J. Cell. Sci. 118 (PT 11), 2355-2362 (2005) PUBMED 15923648 REMARK Review article REFERENCE 8 (bases 1 to 4005) AUTHORS Hillier,L.W., Graves,T.A., Fulton,R.S., Fulton,L.A., Pepin,K.H., Minx,P., Wagner-McPherson,C., Layman,D., Wylie,K., Sekhon,M., Becker,M.C., Fewell,G.A., Delehaunty,K.D., Miner,T.L., Nash,W.E., Kremitzki,C., Oddy,L., Du,H., Sun,H., Bradshaw-Cordum,H., Ali,J., Carter,J., Cordes,M., Harris,A., Isak,A., van Brunt,A., Nguyen,C., Du,F., Courtney,L., Kalicki,J., Ozersky,P., Abbott,S., Armstrong,J., Belter,E.A., Caruso,L., Cedroni,M., Cotton,M., Davidson,T., Desai,A., Elliott,G., Erb,T., Fronick,C., Gaige,T., Haakenson,W., Haglund,K., Holmes,A., Harkins,R., Kim,K., Kruchowski,S.S., Strong,C.M., Grewal,N., Goyea,E., Hou,S., Levy,A., Martinka,S., Mead,K., McLellan,M.D., Meyer,R., Randall-Maher,J., Tomlinson,C., Dauphin-Kohlberg,S., Kozlowicz-Reilly,A., Shah,N., Swearengen-Shahid,S., Snider,J., Strong,J.T., Thompson,J., Yoakum,M., Leonard,S., Pearman,C., Trani,L., Radionenko,M., Waligorski,J.E., Wang,C., Rock,S.M., Tin-Wollam,A.M., Maupin,R., Latreille,P., Wendl,M.C., Yang,S.P., Pohl,C., Wallis,J.W., Spieth,J., Bieri,T.A., Berkowicz,N., Nelson,J.O., Osborne,J., Ding,L., Meyer,R., Sabo,A., Shotland,Y., Sinha,P., Wohldmann,P.E., Cook,L.L., Hickenbotham,M.T., Eldred,J., Williams,D., Jones,T.A., She,X., Ciccarelli,F.D., Izaurralde,E., Taylor,J., Schmutz,J., Myers,R.M., Cox,D.R., Huang,X., McPherson,J.D., Mardis,E.R., Clifton,S.W., Warren,W.C., Chinwalla,A.T., Eddy,S.R., Marra,M.A., Ovcharenko,I., Furey,T.S., Miller,W., Eichler,E.E., Bork,P., Suyama,M., Torrents,D., Waterston,R.H. and Wilson,R.K. TITLE Generation and annotation of the DNA sequences of human chromosomes 2 and 4 JOURNAL Nature 434 (7034), 724-731 (2005) PUBMED 15815621 REFERENCE 9 (bases 1 to 4005) AUTHORS Claverie,J.M., Hardelin,J.P., Legouis,R., Levilliers,J., Bougueleret,L., Mattei,M.G. and Petit,C. TITLE Characterization and chromosomal assignment of a human cDNA encoding a protein related to the murine 102-kDa cadherin-associated protein (alpha-catenin) JOURNAL Genomics 15 (1), 13-20 (1993) PUBMED 8432524 REFERENCE 10 (bases 1 to 4005) AUTHORS Hirano,S., Kimoto,N., Shimoyama,Y., Hirohashi,S. and Takeichi,M. TITLE Identification of a neural alpha-catenin as a key regulator of cadherin function and multicellular organization JOURNAL Cell 70 (2), 293-301 (1992) PUBMED 1638632 COMMENT VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from DC341423.1, DA313393.1, BC052996.1, BC040458.1 and BX648368.1. On Sep 22, 2009 this sequence version replaced gi:55770845. Transcript Variant: This variant (1) represents the longer transcript and encodes the longer isoform (1). CCDS Note: The coding region has been updated to remove a 3-nt insert (encoding Ser-310) that was present in the NCBI Build 36 reference genome assembly. This insert has been removed in the GRCh37 reference genome, and its absence is supported by transcript data. Publication Note: This RefSeq record includes a subset of the publications that are available for this gene. Please see the Gene record to access additional publications. ##Evidence-Data-START## Transcript exon combination :: BC052996.1 [ECO:0000332] RNAseq introns :: single sample supports all introns ERS025082, ERS025084 [ECO:0000348] ##Evidence-Data-END## COMPLETENESS: complete on the 3' end. PRIMARY REFSEQ_SPAN PRIMARY_IDENTIFIER PRIMARY_SPAN COMP 1-62 DC341423.1 1-62 63-141 DA313393.1 1-79 142-2210 BC052996.1 76-2144 2211-2211 BC040458.1 1883-1883 2212-3905 BC052996.1 2146-3839 3906-4005 BX648368.1 1720-1819 FEATURES Location/Qualifiers source 1..4005 /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /chromosome="2" /map="2p12-p11.1" gene 1..4005 /gene="CTNNA2" /gene_synonym="CAP-R; CAPR; CT114; CTNR" /note="catenin (cadherin-associated protein), alpha 2" /db_xref="GeneID:1496" /db_xref="HGNC:2510" /db_xref="MIM:114025" exon 1..274 /gene="CTNNA2" /gene_synonym="CAP-R; CAPR; CT114; CTNR" /inference="alignment:Splign:1.39.8" variation 33 /gene="CTNNA2" /gene_synonym="CAP-R; CAPR; CT114; CTNR" /replace="c" /replace="t" /db_xref="dbSNP:371130830" variation 72 /gene="CTNNA2" /gene_synonym="CAP-R; CAPR; CT114; CTNR" /replace="g" /replace="t" /db_xref="dbSNP:146828435" variation 136 /gene="CTNNA2" /gene_synonym="CAP-R; CAPR; CT114; CTNR" /replace="c" /replace="t" /db_xref="dbSNP:139347248" exon 275..381 /gene="CTNNA2" /gene_synonym="CAP-R; CAPR; CT114; CTNR" /inference="alignment:Splign:1.39.8" CDS 280..2997 /gene="CTNNA2" /gene_synonym="CAP-R; CAPR; CT114; CTNR" /note="isoform 1 is encoded by transcript variant 1; cancer/testis antigen 114; catenin alpha-2; alpha-N-catenin; cadherin-associated protein, related; alpha N-catenin; alpha-catenin-related protein" /codon_start=1 /product="catenin alpha-2 isoform 1" /protein_id="NP_004380.2" /db_xref="GI:55770846" /db_xref="CCDS:CCDS42703.2" /db_xref="GeneID:1496" /db_xref="HGNC:2510" /db_xref="MIM:114025" /translation="
MTSATSPIILKWDPKSLEIRTLTVERLLEPLVTQVTTLVNTSNKGPSGKKKGRSKKAHVLAASVEQATQNFLEKGEQIAKESQDLKEELVAAVEDVRKQGETMRIASSEFADDPCSSVKRGTMVRAARALLSAVTRLLILADMADVMRLLSHLKIVEEALEAVKNATNEQDLANRFKEFGKEMVKLNYVAARRQQELKDPHCRDEMAAARGALKKNATMLYTASQAFLRHPDVAATRANRDYVFKQVQEAIAGISNAAQATSPTDEAKGHTGIGELAAALNEFDNKIILDPMTFSEARFRPSLEERLESIISGAALMADSSCTRDDRRERIVAECNAVRQALQDLLSEYMNNTGRKEKGDPLNIAIDKMTKKTRDLRRQLRKAVMDHISDSFLETNVPLLVLIEAAKSGNEKEVKEYAQVFREHANKLVEVANLACSISNNEEGVKLVRMAATQIDSLCPQVINAALTLAARPQSKVAQDNMDVFKDQWEKQVRVLTEAVDDITSVDDFLSVSENHILEDVNKCVIALQEGDVDTLDRTAGAIRGRAARVIHIINAEMENYEAGVYTEKVLEATKLLSETVMPRFAEQVEVAIEALSANVPQPFEENEFIDASRLVYDGVRDIRKAVLMIRTPEELEDDSDFEQEDYDVRSRTSVQTEDDQLIAGQSARAIMAQLPQEEKAKIAEQVEIFHQEKSKLDAEVAKWDDSGNDIIVLAKQMCMIMMEMTDFTRGKGPLKNTSDVINAAKKIAEAGSRMDKLARAVADQCPDSACKQDLLAYLQRIALYCHQLNICSKVKAEVQNLGGELIVSGLDSATSLIQAAKNLMNAVVLTVKASYVASTKYQKVYGTAAVNSPVVSWKMKAPEKKPLVKREKPEEFQTRVRRGSQKKHISPVQALSEFKAMDSF
" misc_feature 331..2877 /gene="CTNNA2" /gene_synonym="CAP-R; CAPR; CT114; CTNR" /note="Vinculin family; Region: Vinculin; pfam01044" /db_xref="CDD:216263" misc_feature 1063..1065 /gene="CTNNA2" /gene_synonym="CAP-R; CAPR; CT114; CTNR" /experiment="experimental evidence, no additional details recorded" /note="phosphorylation site" misc_feature 2197..2199 /gene="CTNNA2" /gene_synonym="CAP-R; CAPR; CT114; CTNR" /experiment="experimental evidence, no additional details recorded" /note="phosphorylation site" misc_feature 2236..2238 /gene="CTNNA2" /gene_synonym="CAP-R; CAPR; CT114; CTNR" /experiment="experimental evidence, no additional details recorded" /note="phosphorylation site" misc_feature 2239..2241 /gene="CTNNA2" /gene_synonym="CAP-R; CAPR; CT114; CTNR" /experiment="experimental evidence, no additional details recorded" /note="phosphorylation site" misc_feature 2836..2838 /gene="CTNNA2" /gene_synonym="CAP-R; CAPR; CT114; CTNR" /experiment="experimental evidence, no additional details recorded" /note="phosphorylation site" variation 288 /gene="CTNNA2" /gene_synonym="CAP-R; CAPR; CT114; CTNR" /replace="a" /replace="g" /db_xref="dbSNP:368717286" variation 292 /gene="CTNNA2" /gene_synonym="CAP-R; CAPR; CT114; CTNR" /replace="a" /replace="g" /db_xref="dbSNP:372730685" variation 299 /gene="CTNNA2" /gene_synonym="CAP-R; CAPR; CT114; CTNR" /replace="c" /replace="t" /db_xref="dbSNP:190886290" variation 328 /gene="CTNNA2" /gene_synonym="CAP-R; CAPR; CT114; CTNR" /replace="c" /replace="t" /db_xref="dbSNP:375583816" variation 341 /gene="CTNNA2" /gene_synonym="CAP-R; CAPR; CT114; CTNR" /replace="c" /replace="t" /db_xref="dbSNP:369692132" exon 382..577 /gene="CTNNA2" /gene_synonym="CAP-R; CAPR; CT114; CTNR" /inference="alignment:Splign:1.39.8" variation 513 /gene="CTNNA2" /gene_synonym="CAP-R; CAPR; CT114; CTNR" /replace="c" /replace="t" /db_xref="dbSNP:200093329" variation 514 /gene="CTNNA2" /gene_synonym="CAP-R; CAPR; CT114; CTNR" /replace="a" /replace="g" /db_xref="dbSNP:377364195" variation 529 /gene="CTNNA2" /gene_synonym="CAP-R; CAPR; CT114; CTNR" /replace="c" /replace="g" /db_xref="dbSNP:370052135" variation 558 /gene="CTNNA2" /gene_synonym="CAP-R; CAPR; CT114; CTNR" /replace="a" /replace="g" /db_xref="dbSNP:200888828" variation 568 /gene="CTNNA2" /gene_synonym="CAP-R; CAPR; CT114; CTNR" /replace="c" /replace="t" /db_xref="dbSNP:373818447" variation 569 /gene="CTNNA2" /gene_synonym="CAP-R; CAPR; CT114; CTNR" /replace="a" /replace="g" /db_xref="dbSNP:376745664" exon 578..744 /gene="CTNNA2" /gene_synonym="CAP-R; CAPR; CT114; CTNR" /inference="alignment:Splign:1.39.8" variation 585 /gene="CTNNA2" /gene_synonym="CAP-R; CAPR; CT114; CTNR" /replace="g" /replace="t" /db_xref="dbSNP:373823087" variation 595 /gene="CTNNA2" /gene_synonym="CAP-R; CAPR; CT114; CTNR" /replace="a" /replace="g" /db_xref="dbSNP:200794947" variation 603 /gene="CTNNA2" /gene_synonym="CAP-R; CAPR; CT114; CTNR" /replace="c" /replace="t" /db_xref="dbSNP:367585575" variation 630 /gene="CTNNA2" /gene_synonym="CAP-R; CAPR; CT114; CTNR" /replace="a" /replace="g" /db_xref="dbSNP:201020471" variation 640 /gene="CTNNA2" /gene_synonym="CAP-R; CAPR; CT114; CTNR" /replace="a" /replace="g" /db_xref="dbSNP:372361564" variation 645 /gene="CTNNA2" /gene_synonym="CAP-R; CAPR; CT114; CTNR" /replace="c" /replace="t" /db_xref="dbSNP:375393951" variation 656 /gene="CTNNA2" /gene_synonym="CAP-R; CAPR; CT114; CTNR" /replace="c" /replace="t" /db_xref="dbSNP:368392741" variation 657 /gene="CTNNA2" /gene_synonym="CAP-R; CAPR; CT114; CTNR" /replace="a" /replace="g" /db_xref="dbSNP:372587283" variation 665 /gene="CTNNA2" /gene_synonym="CAP-R; CAPR; CT114; CTNR" /replace="a" /replace="c" /db_xref="dbSNP:377081241" variation 677 /gene="CTNNA2" /gene_synonym="CAP-R; CAPR; CT114; CTNR" /replace="c" /replace="t" /db_xref="dbSNP:141412774" variation 678 /gene="CTNNA2" /gene_synonym="CAP-R; CAPR; CT114; CTNR" /replace="a" /replace="g" /db_xref="dbSNP:61754544" exon 745..864 /gene="CTNNA2" /gene_synonym="CAP-R; CAPR; CT114; CTNR" /inference="alignment:Splign:1.39.8" variation 747 /gene="CTNNA2" /gene_synonym="CAP-R; CAPR; CT114; CTNR" /replace="a" /replace="g" /db_xref="dbSNP:369887746" variation 753 /gene="CTNNA2" /gene_synonym="CAP-R; CAPR; CT114; CTNR" /replace="g" /replace="t" /db_xref="dbSNP:199898826" exon 865..1131 /gene="CTNNA2" /gene_synonym="CAP-R; CAPR; CT114; CTNR" /inference="alignment:Splign:1.39.8" variation 887 /gene="CTNNA2" /gene_synonym="CAP-R; CAPR; CT114; CTNR" /replace="a" /replace="g" /db_xref="dbSNP:372749015" variation 903 /gene="CTNNA2" /gene_synonym="CAP-R; CAPR; CT114; CTNR" /replace="c" /replace="t" /db_xref="dbSNP:375699264" variation 904 /gene="CTNNA2" /gene_synonym="CAP-R; CAPR; CT114; CTNR" /replace="g" /replace="t" /db_xref="dbSNP:370270410" variation 945 /gene="CTNNA2" /gene_synonym="CAP-R; CAPR; CT114; CTNR" /replace="g" /replace="t" /db_xref="dbSNP:202210209" variation 948 /gene="CTNNA2" /gene_synonym="CAP-R; CAPR; CT114; CTNR" /replace="c" /replace="t" /db_xref="dbSNP:189010355" variation 979 /gene="CTNNA2" /gene_synonym="CAP-R; CAPR; CT114; CTNR" /replace="a" /replace="g" /db_xref="dbSNP:371032975" variation 984 /gene="CTNNA2" /gene_synonym="CAP-R; CAPR; CT114; CTNR" /replace="g" /replace="t" /db_xref="dbSNP:61291641" variation 1032 /gene="CTNNA2" /gene_synonym="CAP-R; CAPR; CT114; CTNR" /replace="c" /replace="t" /db_xref="dbSNP:368210973" variation 1035 /gene="CTNNA2" /gene_synonym="CAP-R; CAPR; CT114; CTNR" /replace="c" /replace="t" /db_xref="dbSNP:76801084" variation 1062 /gene="CTNNA2" /gene_synonym="CAP-R; CAPR; CT114; CTNR" /replace="c" /replace="t" /db_xref="dbSNP:376731072" variation 1074 /gene="CTNNA2" /gene_synonym="CAP-R; CAPR; CT114; CTNR" /replace="c" /replace="t" /db_xref="dbSNP:202127694" variation 1075 /gene="CTNNA2" /gene_synonym="CAP-R; CAPR; CT114; CTNR" /replace="a" /replace="g" /db_xref="dbSNP:139544972" variation 1091 /gene="CTNNA2" /gene_synonym="CAP-R; CAPR; CT114; CTNR" /replace="c" /replace="t" /db_xref="dbSNP:371923353" exon 1132..1335 /gene="CTNNA2" /gene_synonym="CAP-R; CAPR; CT114; CTNR" /inference="alignment:Splign:1.39.8" variation 1183 /gene="CTNNA2" /gene_synonym="CAP-R; CAPR; CT114; CTNR" /replace="a" /replace="t" /db_xref="dbSNP:377243520" variation 1203..1204 /gene="CTNNA2" /gene_synonym="CAP-R; CAPR; CT114; CTNR" /replace="" /replace="agc" /db_xref="dbSNP:10578220" variation 1204..1206 /gene="CTNNA2" /gene_synonym="CAP-R; CAPR; CT114; CTNR" /replace="" /replace="agc" /db_xref="dbSNP:141716387" variation 1205 /gene="CTNNA2" /gene_synonym="CAP-R; CAPR; CT114; CTNR" /replace="g" /replace="t" /db_xref="dbSNP:200453143" variation 1207..1208 /gene="CTNNA2" /gene_synonym="CAP-R; CAPR; CT114; CTNR" /replace="" /replace="gca" /db_xref="dbSNP:35072200" variation 1207..1208 /gene="CTNNA2" /gene_synonym="CAP-R; CAPR; CT114; CTNR" /replace="g" /replace="t" /db_xref="dbSNP:79358881" variation 1218 /gene="CTNNA2" /gene_synonym="CAP-R; CAPR; CT114; CTNR" /replace="c" /replace="t" /db_xref="dbSNP:370498426" variation 1241 /gene="CTNNA2" /gene_synonym="CAP-R; CAPR; CT114; CTNR" /replace="c" /replace="t" /db_xref="dbSNP:13004023" variation 1242 /gene="CTNNA2" /gene_synonym="CAP-R; CAPR; CT114; CTNR" /replace="a" /replace="c" /db_xref="dbSNP:373147177" variation 1272 /gene="CTNNA2" /gene_synonym="CAP-R; CAPR; CT114; CTNR" /replace="c" /replace="t" /db_xref="dbSNP:112183183" variation 1317 /gene="CTNNA2" /gene_synonym="CAP-R; CAPR; CT114; CTNR" /replace="c" /replace="t" /db_xref="dbSNP:200844323" exon 1336..1416 /gene="CTNNA2" /gene_synonym="CAP-R; CAPR; CT114; CTNR" /inference="alignment:Splign:1.39.8" variation 1355 /gene="CTNNA2" /gene_synonym="CAP-R; CAPR; CT114; CTNR" /replace="c" /replace="g" /db_xref="dbSNP:373365115" variation 1370 /gene="CTNNA2" /gene_synonym="CAP-R; CAPR; CT114; CTNR" /replace="c" /replace="t" /db_xref="dbSNP:61754542" variation 1373 /gene="CTNNA2" /gene_synonym="CAP-R; CAPR; CT114; CTNR" /replace="c" /replace="t" /db_xref="dbSNP:369970894" exon 1417..1569 /gene="CTNNA2" /gene_synonym="CAP-R; CAPR; CT114; CTNR" /inference="alignment:Splign:1.39.8" variation 1466 /gene="CTNNA2" /gene_synonym="CAP-R; CAPR; CT114; CTNR" /replace="a" /replace="g" /db_xref="dbSNP:144724508" variation 1479 /gene="CTNNA2" /gene_synonym="CAP-R; CAPR; CT114; CTNR" /replace="c" /replace="t" /db_xref="dbSNP:35181295" variation 1496 /gene="CTNNA2" /gene_synonym="CAP-R; CAPR; CT114; CTNR" /replace="c" /replace="t" /db_xref="dbSNP:376103479" variation 1503 /gene="CTNNA2" /gene_synonym="CAP-R; CAPR; CT114; CTNR" /replace="c" /replace="t" /db_xref="dbSNP:148134866" exon 1570..1662 /gene="CTNNA2" /gene_synonym="CAP-R; CAPR; CT114; CTNR" /inference="alignment:Splign:1.39.8" variation 1637 /gene="CTNNA2" /gene_synonym="CAP-R; CAPR; CT114; CTNR" /replace="c" /replace="t" /db_xref="dbSNP:372299559" exon 1663..1819 /gene="CTNNA2" /gene_synonym="CAP-R; CAPR; CT114; CTNR" /inference="alignment:Splign:1.39.8" variation 1670 /gene="CTNNA2" /gene_synonym="CAP-R; CAPR; CT114; CTNR" /replace="a" /replace="g" /db_xref="dbSNP:372130983" variation 1674 /gene="CTNNA2" /gene_synonym="CAP-R; CAPR; CT114; CTNR" /replace="c" /replace="t" /db_xref="dbSNP:199835264" variation 1677 /gene="CTNNA2" /gene_synonym="CAP-R; CAPR; CT114; CTNR" /replace="c" /replace="t" /db_xref="dbSNP:183388824" variation 1683 /gene="CTNNA2" /gene_synonym="CAP-R; CAPR; CT114; CTNR" /replace="a" /replace="g" /db_xref="dbSNP:368093118" variation 1745 /gene="CTNNA2" /gene_synonym="CAP-R; CAPR; CT114; CTNR" /replace="g" /replace="t" /db_xref="dbSNP:201409476" variation 1752 /gene="CTNNA2" /gene_synonym="CAP-R; CAPR; CT114; CTNR" /replace="a" /replace="g" /db_xref="dbSNP:371922258" variation 1774 /gene="CTNNA2" /gene_synonym="CAP-R; CAPR; CT114; CTNR" /replace="g" /replace="t" /db_xref="dbSNP:376635234" variation 1776 /gene="CTNNA2" /gene_synonym="CAP-R; CAPR; CT114; CTNR" /replace="c" /replace="t" /db_xref="dbSNP:200693218" variation 1795 /gene="CTNNA2" /gene_synonym="CAP-R; CAPR; CT114; CTNR" /replace="a" /replace="g" /db_xref="dbSNP:368671776" variation 1809 /gene="CTNNA2" /gene_synonym="CAP-R; CAPR; CT114; CTNR" /replace="c" /replace="g" /db_xref="dbSNP:35760472" exon 1820..2020 /gene="CTNNA2" /gene_synonym="CAP-R; CAPR; CT114; CTNR" /inference="alignment:Splign:1.39.8" variation 1825 /gene="CTNNA2" /gene_synonym="CAP-R; CAPR; CT114; CTNR" /replace="a" /replace="c" /db_xref="dbSNP:372762175" variation 1878 /gene="CTNNA2" /gene_synonym="CAP-R; CAPR; CT114; CTNR" /replace="c" /replace="t" /db_xref="dbSNP:34741453" variation 1890 /gene="CTNNA2" /gene_synonym="CAP-R; CAPR; CT114; CTNR" /replace="c" /replace="t" /db_xref="dbSNP:2304338" variation 1892 /gene="CTNNA2" /gene_synonym="CAP-R; CAPR; CT114; CTNR" /replace="a" /replace="g" /db_xref="dbSNP:374311367" variation 1893 /gene="CTNNA2" /gene_synonym="CAP-R; CAPR; CT114; CTNR" /replace="g" /replace="t" /db_xref="dbSNP:374667703" variation 1963 /gene="CTNNA2" /gene_synonym="CAP-R; CAPR; CT114; CTNR" /replace="a" /replace="g" /db_xref="dbSNP:199781520" exon 2021..2172 /gene="CTNNA2" /gene_synonym="CAP-R; CAPR; CT114; CTNR" /inference="alignment:Splign:1.39.8" variation 2029 /gene="CTNNA2" /gene_synonym="CAP-R; CAPR; CT114; CTNR" /replace="c" /replace="t" /db_xref="dbSNP:200341629" variation 2050 /gene="CTNNA2" /gene_synonym="CAP-R; CAPR; CT114; CTNR" /replace="g" /replace="t" /db_xref="dbSNP:376734623" variation 2059 /gene="CTNNA2" /gene_synonym="CAP-R; CAPR; CT114; CTNR" /replace="a" /replace="g" /db_xref="dbSNP:367957293" variation 2076 /gene="CTNNA2" /gene_synonym="CAP-R; CAPR; CT114; CTNR" /replace="c" /replace="t" /db_xref="dbSNP:371544995" variation 2079 /gene="CTNNA2" /gene_synonym="CAP-R; CAPR; CT114; CTNR" /replace="c" /replace="t" /db_xref="dbSNP:2228460" variation 2081 /gene="CTNNA2" /gene_synonym="CAP-R; CAPR; CT114; CTNR" /replace="c" /replace="t" /db_xref="dbSNP:150870808" variation 2083 /gene="CTNNA2" /gene_synonym="CAP-R; CAPR; CT114; CTNR" /replace="a" /replace="c" /db_xref="dbSNP:199851508" variation 2088 /gene="CTNNA2" /gene_synonym="CAP-R; CAPR; CT114; CTNR" /replace="a" /replace="g" /db_xref="dbSNP:370004446" variation 2149 /gene="CTNNA2" /gene_synonym="CAP-R; CAPR; CT114; CTNR" /replace="a" /replace="c" /db_xref="dbSNP:373816978" variation 2155 /gene="CTNNA2" /gene_synonym="CAP-R; CAPR; CT114; CTNR" /replace="a" /replace="g" /db_xref="dbSNP:375218627" variation 2161 /gene="CTNNA2" /gene_synonym="CAP-R; CAPR; CT114; CTNR" /replace="c" /replace="t" /db_xref="dbSNP:369395759" exon 2173..2286 /gene="CTNNA2" /gene_synonym="CAP-R; CAPR; CT114; CTNR" /inference="alignment:Splign:1.39.8" variation 2193 /gene="CTNNA2" /gene_synonym="CAP-R; CAPR; CT114; CTNR" /replace="c" /replace="t" /db_xref="dbSNP:200688682" variation 2211 /gene="CTNNA2" /gene_synonym="CAP-R; CAPR; CT114; CTNR" /replace="a" /replace="g" /db_xref="dbSNP:17854795" variation 2231 /gene="CTNNA2" /gene_synonym="CAP-R; CAPR; CT114; CTNR" /replace="c" /replace="g" /db_xref="dbSNP:61743764" variation 2280 /gene="CTNNA2" /gene_synonym="CAP-R; CAPR; CT114; CTNR" /replace="c" /replace="t" /db_xref="dbSNP:368214934" exon 2287..2468 /gene="CTNNA2" /gene_synonym="CAP-R; CAPR; CT114; CTNR" /inference="alignment:Splign:1.39.8" variation 2307 /gene="CTNNA2" /gene_synonym="CAP-R; CAPR; CT114; CTNR" /replace="c" /replace="g" /db_xref="dbSNP:199921745" variation 2380 /gene="CTNNA2" /gene_synonym="CAP-R; CAPR; CT114; CTNR" /replace="a" /replace="g" /db_xref="dbSNP:41288785" variation 2457 /gene="CTNNA2" /gene_synonym="CAP-R; CAPR; CT114; CTNR" /replace="a" /replace="c" /db_xref="dbSNP:140894812" exon 2469..2574 /gene="CTNNA2" /gene_synonym="CAP-R; CAPR; CT114; CTNR" /inference="alignment:Splign:1.39.8" variation 2475 /gene="CTNNA2" /gene_synonym="CAP-R; CAPR; CT114; CTNR" /replace="a" /replace="g" /db_xref="dbSNP:200977623" exon 2575..2709 /gene="CTNNA2" /gene_synonym="CAP-R; CAPR; CT114; CTNR" /inference="alignment:Splign:1.39.8" variation 2691 /gene="CTNNA2" /gene_synonym="CAP-R; CAPR; CT114; CTNR" /replace="a" /replace="c" /db_xref="dbSNP:369818338" variation 2694 /gene="CTNNA2" /gene_synonym="CAP-R; CAPR; CT114; CTNR" /replace="a" /replace="g" /db_xref="dbSNP:372072591" exon 2710..3993 /gene="CTNNA2" /gene_synonym="CAP-R; CAPR; CT114; CTNR" /inference="alignment:Splign:1.39.8" variation 2724 /gene="CTNNA2" /gene_synonym="CAP-R; CAPR; CT114; CTNR" /replace="a" /replace="g" /db_xref="dbSNP:369006211" variation 2764 /gene="CTNNA2" /gene_synonym="CAP-R; CAPR; CT114; CTNR" /replace="a" /replace="g" /db_xref="dbSNP:201128941" variation 2767 /gene="CTNNA2" /gene_synonym="CAP-R; CAPR; CT114; CTNR" /replace="c" /replace="t" /db_xref="dbSNP:139367648" variation 2772 /gene="CTNNA2" /gene_synonym="CAP-R; CAPR; CT114; CTNR" /replace="a" /replace="g" /db_xref="dbSNP:377763685" variation 2924 /gene="CTNNA2" /gene_synonym="CAP-R; CAPR; CT114; CTNR" /replace="a" /replace="g" /db_xref="dbSNP:202053681" STS 2975..3217 /gene="CTNNA2" /gene_synonym="CAP-R; CAPR; CT114; CTNR" /standard_name="G10614" /db_xref="UniSTS:63953" variation 3000 /gene="CTNNA2" /gene_synonym="CAP-R; CAPR; CT114; CTNR" /replace="c" /replace="t" /db_xref="dbSNP:189634424" variation 3001 /gene="CTNNA2" /gene_synonym="CAP-R; CAPR; CT114; CTNR" /replace="a" /replace="g" /db_xref="dbSNP:375801955" variation 3013 /gene="CTNNA2" /gene_synonym="CAP-R; CAPR; CT114; CTNR" /replace="c" /replace="g" /db_xref="dbSNP:377284441" variation 3027..3030 /gene="CTNNA2" /gene_synonym="CAP-R; CAPR; CT114; CTNR" /replace="" /replace="cttt" /db_xref="dbSNP:375870913" variation 3051 /gene="CTNNA2" /gene_synonym="CAP-R; CAPR; CT114; CTNR" /replace="c" /replace="t" /db_xref="dbSNP:78913430" variation 3115 /gene="CTNNA2" /gene_synonym="CAP-R; CAPR; CT114; CTNR" /replace="a" /replace="g" /db_xref="dbSNP:181635078" variation 3132 /gene="CTNNA2" /gene_synonym="CAP-R; CAPR; CT114; CTNR" /replace="c" /replace="t" /db_xref="dbSNP:186768234" STS 3134..3831 /gene="CTNNA2" /gene_synonym="CAP-R; CAPR; CT114; CTNR" /standard_name="CTNNA2_567" /db_xref="UniSTS:468364" variation 3146 /gene="CTNNA2" /gene_synonym="CAP-R; CAPR; CT114; CTNR" /replace="a" /replace="t" /db_xref="dbSNP:146155710" variation 3169 /gene="CTNNA2" /gene_synonym="CAP-R; CAPR; CT114; CTNR" /replace="c" /replace="t" /db_xref="dbSNP:377148303" variation 3259 /gene="CTNNA2" /gene_synonym="CAP-R; CAPR; CT114; CTNR" /replace="c" /replace="t" /db_xref="dbSNP:370523708" variation 3267 /gene="CTNNA2" /gene_synonym="CAP-R; CAPR; CT114; CTNR" /replace="c" /replace="t" /db_xref="dbSNP:373715823" STS 3286..3630 /gene="CTNNA2" /gene_synonym="CAP-R; CAPR; CT114; CTNR" /standard_name="WI-7682" /db_xref="UniSTS:52048" variation 3291 /gene="CTNNA2" /gene_synonym="CAP-R; CAPR; CT114; CTNR" /replace="a" /replace="c" /db_xref="dbSNP:11555661" variation 3344 /gene="CTNNA2" /gene_synonym="CAP-R; CAPR; CT114; CTNR" /replace="a" /replace="t" /db_xref="dbSNP:138787272" variation 3430 /gene="CTNNA2" /gene_synonym="CAP-R; CAPR; CT114; CTNR" /replace="a" /replace="c" /db_xref="dbSNP:201213456" STS 3453..3598 /gene="CTNNA2" /gene_synonym="CAP-R; CAPR; CT114; CTNR" /standard_name="RH66010" /db_xref="UniSTS:89466" variation 3503 /gene="CTNNA2" /gene_synonym="CAP-R; CAPR; CT114; CTNR" /replace="a" /replace="g" /db_xref="dbSNP:141978801" variation 3505 /gene="CTNNA2" /gene_synonym="CAP-R; CAPR; CT114; CTNR" /replace="a" /replace="g" /db_xref="dbSNP:60296403" variation 3611 /gene="CTNNA2" /gene_synonym="CAP-R; CAPR; CT114; CTNR" /replace="a" /replace="c" /db_xref="dbSNP:11445" variation 3697 /gene="CTNNA2" /gene_synonym="CAP-R; CAPR; CT114; CTNR" /replace="a" /replace="g" /db_xref="dbSNP:76851105" variation 3716..3717 /gene="CTNNA2" /gene_synonym="CAP-R; CAPR; CT114; CTNR" /replace="" /replace="t" /db_xref="dbSNP:200455804" variation 3717 /gene="CTNNA2" /gene_synonym="CAP-R; CAPR; CT114; CTNR" /replace="" /replace="t" /db_xref="dbSNP:372255835" variation 3726..3727 /gene="CTNNA2" /gene_synonym="CAP-R; CAPR; CT114; CTNR" /replace="" /replace="t" /db_xref="dbSNP:34088328" variation 3726 /gene="CTNNA2" /gene_synonym="CAP-R; CAPR; CT114; CTNR" /replace="a" /replace="g" /db_xref="dbSNP:199727314" variation 3732 /gene="CTNNA2" /gene_synonym="CAP-R; CAPR; CT114; CTNR" /replace="a" /replace="t" /db_xref="dbSNP:201182907" variation 3733 /gene="CTNNA2" /gene_synonym="CAP-R; CAPR; CT114; CTNR" /replace="a" /replace="t" /db_xref="dbSNP:201608046" variation 3775 /gene="CTNNA2" /gene_synonym="CAP-R; CAPR; CT114; CTNR" /replace="g" /replace="t" /db_xref="dbSNP:56732269" variation 3782..3785 /gene="CTNNA2" /gene_synonym="CAP-R; CAPR; CT114; CTNR" /replace="" /replace="ctct" /db_xref="dbSNP:25610" variation 3803 /gene="CTNNA2" /gene_synonym="CAP-R; CAPR; CT114; CTNR" /replace="a" /replace="g" /db_xref="dbSNP:370901394" variation 3855 /gene="CTNNA2" /gene_synonym="CAP-R; CAPR; CT114; CTNR" /replace="a" /replace="g" /db_xref="dbSNP:375596683" variation 3871..3872 /gene="CTNNA2" /gene_synonym="CAP-R; CAPR; CT114; CTNR" /replace="" /replace="acta" /db_xref="dbSNP:375689381" variation 3901 /gene="CTNNA2" /gene_synonym="CAP-R; CAPR; CT114; CTNR" /replace="a" /replace="c" /db_xref="dbSNP:181335402" variation 3970 /gene="CTNNA2" /gene_synonym="CAP-R; CAPR; CT114; CTNR" /replace="c" /replace="t" /db_xref="dbSNP:117188261" variation 3987 /gene="CTNNA2" /gene_synonym="CAP-R; CAPR; CT114; CTNR" /replace="" /replace="a" /db_xref="dbSNP:202190228" ORIGIN
ctagcggcgatccgggccgctgccgctcgcgcttgggcaggacgcggggcgggcggggggaggggggagcggcttcgcttccagccccgagtgaggcggagacccaggcgggcgggcagagcaggcggcaccgcacctcggccagaggcggctgcagcagctgctgcccttgtccctgccgccgcctctccagtcccttctgtgattaccactccagctgctgggaacgggcgagaaagaggaggaggcgagaaactcccaccgacccacagagggagcatgacttcggcaacttcacctatcattctgaaatgggaccccaaaagtttggaaatccggacgctaacagtggaaaggctgttggagccacttgttacacaggtgactacacttgtcaacacaagcaacaaaggcccatctggtaaaaagaaagggaggtcaaagaaagcccatgtactagctgcctctgtagagcaagccactcagaatttcctggaaaagggtgaacagatcgctaaggagagtcaagatctcaaagaagagttggtggctgctgtagaggatgtgcgcaaacaaggtgagacgatgcggatcgcctcctccgagtttgcagatgacccttgctcgtcggtaaagcgcggcaccatggtacgggcggcaagggctttgctctccgcggtgacacgcttactcatcctggcggacatggcagatgtcatgagacttttatcccatctgaaaattgtggaagaggccctggaagctgtcaaaaatgctacaaatgagcaagaccttgcaaaccgttttaaagagtttgggaaagagatggtgaaacttaactatgtagcagcaagaagacaacaggagctgaaggatcctcactgtcgggatgagatggcagccgcccgaggggctctgaagaagaatgccacaatgctgtacacggcctctcaagcatttctccgccacccagatgtcgccgctacgagagccaaccgagattatgtgttcaaacaagtccaggaggccatcgccggcatctccaatgctgctcaagctacctcgcccactgacgaagccaagggccacacgggcatcggcgagctggctgcggctcttaatgagtttgacaataagattatcctggaccccatgacgttcagcgaggccaggttccggccgtccctggaggagaggctggagagcatcatcagcggcgcagcgctgatggccgactcctcctgcacgcgagacgaccggcgcgagaggatcgtggcggagtgcaacgccgtgcggcaggcgctccaggacctgctcagcgagtacatgaataatactggaaggaaagaaaaaggagatcctctcaacattgcgattgataagatgactaagaaaacaagagatctaaggagacagcttcggaaagcagtgatggatcacatatctgactctttcctggaaaccaatgttcctttgctagttctcattgaggctgcaaagagcggaaatgaaaaggaagtgaaagaatatgcccaagttttccgtgagcatgccaacaaactggtagaggttgccaatttggcctgttccatctccaacaatgaagaaggggtgaaattagttcggatggcagccacccagattgacagcctgtgtccccaggtcatcaatgccgctctgacactggctgcccggccacagagcaaagttgctcaggataacatggacgtcttcaaagaccagtgggagaagcaggtccgagtgttgacagaggccgtggatgacatcacctcagtggatgacttcctctctgtctcagaaaatcacatcttggaggatgtgaacaagtgtgtgatagccctccaagagggcgatgtggacactctggaccggactgcaggggccatcaggggccgggcagctcgagtcatacacatcatcaatgctgagatggagaactatgaagctggggtttatactgagaaggtgttggaagctacaaaattgctttctgaaacagtgatgccacgcttcgctgaacaagtagaggttgccattgaagccctgagtgccaacgttcctcaaccgtttgaggagaatgagttcatcgatgcctctcgcctggtgtatgatggcgttcgggacatcagaaaggctgtgctgatgatcaggaccccagaagaactagaggatgattctgactttgagcaggaagattatgatgtgcgtagcaggacaagtgttcagactgaggatgaccagctcattgcagggcagagcgcacgggccatcatggcgcaactaccgcaggaggagaaggcaaaaatagctgagcaggtggagatattccatcaagagaaaagcaagctggatgcagaagtggccaaatgggacgacagcggcaatgatatcattgtactggccaagcagatgtgtatgatcatgatggaaatgacagacttcacaagaggcaaaggcccattgaaaaatacatctgatgtcattaatgctgccaagaaaattgccgaagcaggttctcgaatggacaaattagctcgtgctgtggctgatcagtgtcctgattcagcatgtaagcaggatttattagcctaccttcaacgaattgccttgtattgccatcagcttaatatctgcagcaaggtgaaggcagaagtgcagaatctgggaggagagctcattgtgtcagggctggacagtgccacatcgcttatccaggcagctaaaaacctgatgaatgctgttgtcctcacggtgaaagcatcctatgtggcctcaaccaaataccagaaggtctatgggacagcagctgtcaactcacctgttgtgtcttggaagatgaaggctccagagaagaagccccttgtgaagagagaaaagcctgaagaattccagacacgagttcgacgaggttctcagaagaaacacatttcgcctgtacaggctttaagtgaattcaaagcaatggattccttctaggacgataggttttaacaagaaagctttttctttcttttctttctttctttttctttttaattccatttttgtatgcatacctgccagctcgtatgcctctggcatggggaaattaagggaacagtgtctgtttgcatgtaagatgagatgagatcaatactactgatccatctgtagcctgggaaggagacaggacattcctgtactaaggtggcacagagctgtcctttgcaacattctcataaaattgggcacagagttcgcattggcgcaatatttatgggagtgggagggatggggaaaataaacttaactctacaaaagcaaactctaatgcatgcaagaatcattaggttggcaggtatatgcataagtgaaaaatctggaagtgtaatggtagaacataaaacttgtattgcttctgtttcagtgcaaaaatgtactagccaatacgcttaagtgtgtggcccatgaattgaacaatttaaccttgaagtctatatccgtgatattatgtcgatttttaactgaggggaaattaactagtccagcctaaaatgcttcttttaatctgcattctgtttcctcttctagttgtgccattactagtgatcatgtttttttcccccctttaatgaaaacaataaacatctatttgagacaattaaaatccttctgggggcactggaagcacaatacggtgaccaatcttgctttcatttttttttctttttaatttgaaccatgattttgctagaaatagaaggcccagtggtggaatattagagggaaggaaactgacaacgtgtgaaagttagaggcaaatacataggtgtagcttggagtgctggtatctaatataccattgtattcactaactaactcaaaataaacacatttaatcttgacatctcaagtatgttttcttttttaattttttaagtatgtacttaataaagattagagcatcatcttcctgaaaattcattaaaaaaaaaaaaaaaaaaa
//
ANNOTATIONS from NCBI Entrez Gene (20130726): GeneID:1496 -> Molecular function: GO:0005200 [structural constituent of cytoskeleton] evidence: NAS GeneID:1496 -> Molecular function: GO:0005515 [protein binding] evidence: IPI GeneID:1496 -> Molecular function: GO:0045296 [cadherin binding] evidence: IEA GeneID:1496 -> Biological process: GO:0007409 [axonogenesis] evidence: ISS GeneID:1496 -> Biological process: GO:0016337 [cell-cell adhesion] evidence: ISS GeneID:1496 -> Biological process: GO:0021942 [radial glia guided migration of Purkinje cell] evidence: ISS GeneID:1496 -> Biological process: GO:0042692 [muscle cell differentiation] evidence: TAS GeneID:1496 -> Biological process: GO:0048813 [dendrite morphogenesis] evidence: ISS GeneID:1496 -> Biological process: GO:0048854 [brain morphogenesis] evidence: ISS GeneID:1496 -> Biological process: GO:0051149 [positive regulation of muscle cell differentiation] evidence: TAS GeneID:1496 -> Biological process: GO:0051823 [regulation of synapse structural plasticity] evidence: ISS GeneID:1496 -> Biological process: GO:0060134 [prepulse inhibition] evidence: ISS GeneID:1496 -> Cellular component: GO:0005737 [cytoplasm] evidence: IDA GeneID:1496 -> Cellular component: GO:0005829 [cytosol] evidence: TAS GeneID:1496 -> Cellular component: GO:0005912 [adherens junction] evidence: ISS GeneID:1496 -> Cellular component: GO:0005913 [cell-cell adherens junction] evidence: IEA GeneID:1496 -> Cellular component: GO:0015629 [actin cytoskeleton] evidence: IEA GeneID:1496 -> Cellular component: GO:0016323 [basolateral plasma membrane] evidence: IEA GeneID:1496 -> Cellular component: GO:0030027 [lamellipodium] evidence: IEA GeneID:1496 -> Cellular component: GO:0030424 [axon] evidence: ISS
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