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2025-05-09 20:06:12, GGRNA : RefSeq release 60 (20130726)

LOCUS       NR_002307               2162 bp    RNA     linear   PRI 16-JUL-2013
DEFINITION  Homo sapiens msh homeobox 2 pseudogene 1 (MSX2P1), non-coding RNA.
ACCESSION   NR_002307 XM_496232
VERSION     NR_002307.1  GI:62955053
KEYWORDS    RefSeq.
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
REFERENCE   1  (bases 1 to 2162)
  AUTHORS   Moretti,P., Simmons,P., Thomas,P., Haylock,D., Rathjen,P., Vadas,M.
            and D'Andrea,R.
  TITLE     Identification of homeobox genes expressed in human haemopoietic
            progenitor cells
  JOURNAL   Gene 144 (2), 213-219 (1994)
   PUBMED   7518789
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from AC005962.1.
            On Apr 30, 2005 this sequence version replaced gi:51474305.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-2162              AC005962.1         78581-80742
FEATURES             Location/Qualifiers
     source          1..2162
                     /organism="Homo sapiens"
                     /mol_type="transcribed RNA"
                     /db_xref="taxon:9606"
                     /chromosome="17"
                     /map="17q22"
     gene            1..2162
                     /gene="MSX2P1"
                     /gene_synonym="HPX5; HSHPX5; MSX2P"
                     /note="msh homeobox 2 pseudogene 1"
                     /pseudo
                     /db_xref="GeneID:55545"
                     /db_xref="HGNC:24976"
     misc_RNA        1..2162
                     /gene="MSX2P1"
                     /gene_synonym="HPX5; HSHPX5; MSX2P"
                     /product="msh homeobox 2 pseudogene 1"
                     /pseudo
                     /db_xref="GeneID:55545"
                     /db_xref="HGNC:24976"
     exon            1..2162
                     /gene="MSX2P1"
                     /gene_synonym="HPX5; HSHPX5; MSX2P"
                     /inference="alignment:Splign:1.39.8"
                     /pseudo
     variation       76
                     /gene="MSX2P1"
                     /gene_synonym="HPX5; HSHPX5; MSX2P"
                     /replace="a"
                     /replace="g"
                     /db_xref="dbSNP:372626380"
     variation       109
                     /gene="MSX2P1"
                     /gene_synonym="HPX5; HSHPX5; MSX2P"
                     /replace="a"
                     /replace="g"
                     /db_xref="dbSNP:8081708"
     variation       181
                     /gene="MSX2P1"
                     /gene_synonym="HPX5; HSHPX5; MSX2P"
                     /replace="a"
                     /replace="c"
                     /db_xref="dbSNP:368005874"
     variation       196
                     /gene="MSX2P1"
                     /gene_synonym="HPX5; HSHPX5; MSX2P"
                     /replace="c"
                     /replace="t"
                     /db_xref="dbSNP:370669686"
     variation       240
                     /gene="MSX2P1"
                     /gene_synonym="HPX5; HSHPX5; MSX2P"
                     /replace="c"
                     /replace="t"
                     /db_xref="dbSNP:186173688"
     variation       392
                     /gene="MSX2P1"
                     /gene_synonym="HPX5; HSHPX5; MSX2P"
                     /replace="a"
                     /replace="g"
                     /db_xref="dbSNP:373940017"
     variation       408
                     /gene="MSX2P1"
                     /gene_synonym="HPX5; HSHPX5; MSX2P"
                     /replace="a"
                     /replace="t"
                     /db_xref="dbSNP:72839961"
     variation       411
                     /gene="MSX2P1"
                     /gene_synonym="HPX5; HSHPX5; MSX2P"
                     /replace="g"
                     /replace="t"
                     /db_xref="dbSNP:189701007"
     variation       462
                     /gene="MSX2P1"
                     /gene_synonym="HPX5; HSHPX5; MSX2P"
                     /replace="a"
                     /replace="g"
                     /db_xref="dbSNP:150737599"
     variation       478
                     /gene="MSX2P1"
                     /gene_synonym="HPX5; HSHPX5; MSX2P"
                     /replace="c"
                     /replace="t"
                     /db_xref="dbSNP:55825629"
     variation       495
                     /gene="MSX2P1"
                     /gene_synonym="HPX5; HSHPX5; MSX2P"
                     /replace="a"
                     /replace="g"
                     /db_xref="dbSNP:139107724"
     variation       608
                     /gene="MSX2P1"
                     /gene_synonym="HPX5; HSHPX5; MSX2P"
                     /replace="g"
                     /replace="t"
                     /db_xref="dbSNP:56207505"
     variation       768
                     /gene="MSX2P1"
                     /gene_synonym="HPX5; HSHPX5; MSX2P"
                     /replace="c"
                     /replace="t"
                     /db_xref="dbSNP:368234672"
     variation       771
                     /gene="MSX2P1"
                     /gene_synonym="HPX5; HSHPX5; MSX2P"
                     /replace="c"
                     /replace="t"
                     /db_xref="dbSNP:202188750"
     variation       780
                     /gene="MSX2P1"
                     /gene_synonym="HPX5; HSHPX5; MSX2P"
                     /replace="c"
                     /replace="g"
                     /db_xref="dbSNP:200314302"
     variation       785
                     /gene="MSX2P1"
                     /gene_synonym="HPX5; HSHPX5; MSX2P"
                     /replace="a"
                     /replace="c"
                     /db_xref="dbSNP:3863503"
     variation       824
                     /gene="MSX2P1"
                     /gene_synonym="HPX5; HSHPX5; MSX2P"
                     /replace="a"
                     /replace="g"
                     /db_xref="dbSNP:181401891"
     variation       856
                     /gene="MSX2P1"
                     /gene_synonym="HPX5; HSHPX5; MSX2P"
                     /replace="c"
                     /replace="g"
                     /db_xref="dbSNP:149874258"
     variation       1003
                     /gene="MSX2P1"
                     /gene_synonym="HPX5; HSHPX5; MSX2P"
                     /replace="a"
                     /replace="g"
                     /db_xref="dbSNP:1987665"
     variation       1103
                     /gene="MSX2P1"
                     /gene_synonym="HPX5; HSHPX5; MSX2P"
                     /replace="c"
                     /replace="t"
                     /db_xref="dbSNP:9914480"
     variation       1149
                     /gene="MSX2P1"
                     /gene_synonym="HPX5; HSHPX5; MSX2P"
                     /replace="a"
                     /replace="t"
                     /db_xref="dbSNP:3760172"
     variation       1349
                     /gene="MSX2P1"
                     /gene_synonym="HPX5; HSHPX5; MSX2P"
                     /replace="c"
                     /replace="t"
                     /db_xref="dbSNP:146436297"
     variation       1491
                     /gene="MSX2P1"
                     /gene_synonym="HPX5; HSHPX5; MSX2P"
                     /replace=""
                     /replace="a"
                     /db_xref="dbSNP:372360322"
     variation       1492
                     /gene="MSX2P1"
                     /gene_synonym="HPX5; HSHPX5; MSX2P"
                     /replace=""
                     /replace="c"
                     /db_xref="dbSNP:141202898"
     variation       1500
                     /gene="MSX2P1"
                     /gene_synonym="HPX5; HSHPX5; MSX2P"
                     /replace="a"
                     /replace="c"
                     /db_xref="dbSNP:73993611"
     variation       1591
                     /gene="MSX2P1"
                     /gene_synonym="HPX5; HSHPX5; MSX2P"
                     /replace="a"
                     /replace="g"
                     /db_xref="dbSNP:185984568"
     variation       1614..1615
                     /gene="MSX2P1"
                     /gene_synonym="HPX5; HSHPX5; MSX2P"
                     /replace=""
                     /replace="a"
                     /db_xref="dbSNP:112807085"
     variation       1674
                     /gene="MSX2P1"
                     /gene_synonym="HPX5; HSHPX5; MSX2P"
                     /replace="a"
                     /replace="t"
                     /db_xref="dbSNP:190949808"
     variation       1677
                     /gene="MSX2P1"
                     /gene_synonym="HPX5; HSHPX5; MSX2P"
                     /replace="g"
                     /replace="t"
                     /db_xref="dbSNP:182241221"
     variation       1716
                     /gene="MSX2P1"
                     /gene_synonym="HPX5; HSHPX5; MSX2P"
                     /replace="a"
                     /replace="g"
                     /db_xref="dbSNP:114085481"
     variation       1725
                     /gene="MSX2P1"
                     /gene_synonym="HPX5; HSHPX5; MSX2P"
                     /replace="a"
                     /replace="t"
                     /db_xref="dbSNP:139971326"
     variation       1759
                     /gene="MSX2P1"
                     /gene_synonym="HPX5; HSHPX5; MSX2P"
                     /replace=""
                     /replace="g"
                     /db_xref="dbSNP:200967002"
     variation       1764
                     /gene="MSX2P1"
                     /gene_synonym="HPX5; HSHPX5; MSX2P"
                     /replace="a"
                     /replace="g"
                     /db_xref="dbSNP:143435296"
     variation       1878
                     /gene="MSX2P1"
                     /gene_synonym="HPX5; HSHPX5; MSX2P"
                     /replace="a"
                     /replace="g"
                     /db_xref="dbSNP:60194146"
     variation       1887
                     /gene="MSX2P1"
                     /gene_synonym="HPX5; HSHPX5; MSX2P"
                     /replace="c"
                     /replace="g"
                     /db_xref="dbSNP:190985301"
     variation       2005
                     /gene="MSX2P1"
                     /gene_synonym="HPX5; HSHPX5; MSX2P"
                     /replace="c"
                     /replace="t"
                     /db_xref="dbSNP:117470364"
     variation       2037
                     /gene="MSX2P1"
                     /gene_synonym="HPX5; HSHPX5; MSX2P"
                     /replace="a"
                     /replace="c"
                     /db_xref="dbSNP:182768539"
     variation       2053..2054
                     /gene="MSX2P1"
                     /gene_synonym="HPX5; HSHPX5; MSX2P"
                     /replace=""
                     /replace="t"
                     /db_xref="dbSNP:35205325"
     variation       2085
                     /gene="MSX2P1"
                     /gene_synonym="HPX5; HSHPX5; MSX2P"
                     /replace="a"
                     /replace="g"
                     /db_xref="dbSNP:146759897"
     variation       2162
                     /gene="MSX2P1"
                     /gene_synonym="HPX5; HSHPX5; MSX2P"
                     /replace="a"
                     /replace="c"
                     /db_xref="dbSNP:140324743"
ORIGIN      





gtcgccgctgcgggttgctagcggagtcgcgcgtcgggagctacgtagggcagggaaggcatggcttctgttttcgtccaatgagaaggggccagcggtggcggtcgggccaggtccggggcctggggacgccgaggcggccgcggaggagcgccgcgtcaaggtctccagcctgccctacagtgtggatgcgctcgtgtcggacaagaagccgcccaaggaggcatccccagtgccggccaaaagcgcctcttccggggccaccctgcggctactgctgctgccggggcacggcgctcgggaagcgcacagccccgggccgctgatcaagcccttcgagaccgcctcggtcaagtgggaaaactccctaagacggagcggcgtggatgcaggaaccctgctgataattcgccgccgccaagacacgtgagccctaccacctgcaccctgagaaaacacaagaccaatccgaagccgcgcacagcctttaccacgtcccagctcctcgctctggagggcaagttgctccagaaacagtacctctccattgcagagggtgcggacttctccagctctccgaacctcacggagactcaggtcaaaatcttgttccagaaccgaagggccaagacgaaaagactgcaggagtcagaactggaaaagctgaaaatggctgcaaaacctatgctaccctccagcttcagtctccctttccccatcagctcgcccctgcaggcagcgtccatatacgcagcatcctacccgttccatagacctgtgcttcccatcccgcccgtgggactctatgccacgccagtgggatatggcatgtaccacctgtcctaaggaagaccagatcaatagactccatgatggatgtttgtttcaaagggtttcctctccctctccaagaaggcaggaccagccaatactcctgttctgcaaaccctgagtgcaccaccctaagcggctaggccggcagggccacacgacacagctgaagtttgttctttaggcggaggcaccaagccttgttttcttggtgtaatcttccaggtgcccccttctcctttcacaaagattggctctgatggtttttatgtataaatatatatataataaaatataatacatttgtatacagtagatgtaaaaattcaaattattttaaaaggcaaaatttatatacatatgtgcttttttcctatatgtcaccttcttaaagagactgtgtaagtccatttgttgtgttttcttaaagagggagacaaattatttgcaaaacttgctaaagtcaatgattttgatgggatgattgacttctgcttatggaaaacaaatattagaattggacataatgcacatagaaagtattagatatggagaggtttttcaaagtgaaggggacacatcacatttctgcattttacttgcattaaaagaaacctttttatatactaccatatttgttcctatctctccccacgcccaccccccccccacacacacatttttacagttttacctttttgaagaattttttttttgtaagaccaataaccgggatgagaagaatcctgagaatgcctggaggtgaggtagaaaattagaaatacttcctaattcttctcaaggctgttgctttacttcatttcagataattggagagtaaaaagttaaagcctgttgggaggagttgatggtttctgagaaatactaggtactttcatcctcacagattgcaaagattatttgggtgggggggtacagtaattttctgcttaaaaaatgagtaccttgtaaccattacctgtatgctaaatattcttgaacaattggtagatccagaaagaaaaaaaattatgctttctctgtgtgtgtacctgctgtatatgctaaacttattagaaaattttatatactttttaacatgtccagggcagaagataaagccatgttttgacttggtgaaaatggagttgccaaacagcccattaagctccctggtatttcaccttcctctccatctctcccatccctccagtatgcctttacccctttgaaagggtgccttgtacaattgtatatattttattgaagagttattatatcttattctgaattaaattaaacatgttttattgcaaaaaaaagaagagaaa


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