2025-05-09 19:45:18, GGRNA : RefSeq release 60 (20130726)
LOCUS NM_004571 4997 bp mRNA linear PRI 17-APR-2013 DEFINITION Homo sapiens PBX/knotted 1 homeobox 1 (PKNOX1), mRNA. ACCESSION NM_004571 VERSION NM_004571.3 GI:37595549 KEYWORDS RefSeq. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 4997) AUTHORS Bol,S.M., Booiman,T., van Manen,D., Bunnik,E.M., van Sighem,A.I., Sieberer,M., Boeser-Nunnink,B., de Wolf,F., Schuitemaker,H., Portegies,P., Kootstra,N.A. and van 't Wout,A.B. TITLE Single nucleotide polymorphism in gene encoding transcription factor Prep1 is associated with HIV-1-associated dementia JOURNAL PLoS ONE 7 (2), E30990 (2012) PUBMED 22347417 REMARK GeneRIF: Single nucleotide polymorphism in gene encoding transcription factor Prep1 is associated with HIV-1-associated dementia REFERENCE 2 (bases 1 to 4997) AUTHORS Iotti,G., Longobardi,E., Masella,S., Dardaei,L., De Santis,F., Micali,N. and Blasi,F. TITLE Homeodomain transcription factor and tumor suppressor Prep1 is required to maintain genomic stability JOURNAL Proc. Natl. Acad. Sci. U.S.A. 108 (29), E314-E322 (2011) PUBMED 21715654 REMARK GeneRIF: The tumor suppressor role of Prep1 is associated with the maintenance of genomic stability. REFERENCE 3 (bases 1 to 4997) AUTHORS Luciano,M., Hansell,N.K., Lahti,J., Davies,G., Medland,S.E., Raikkonen,K., Tenesa,A., Widen,E., McGhee,K.A., Palotie,A., Liewald,D., Porteous,D.J., Starr,J.M., Montgomery,G.W., Martin,N.G., Eriksson,J.G., Wright,M.J. and Deary,I.J. TITLE Whole genome association scan for genetic polymorphisms influencing information processing speed JOURNAL Biol Psychol 86 (3), 193-202 (2011) PUBMED 21130836 REFERENCE 4 (bases 1 to 4997) AUTHORS Rosales-Avina,J.A., Torres-Flores,J., Aguilar-Lemarroy,A., Gurrola-Diaz,C., Hernandez-Flores,G., Ortiz-Lazareno,P.C., Lerma-Diaz,J.M., de Celis,R., Gonzalez-Ramella,O., Barrera-Chaires,E., Bravo-Cuellar,A. and Jave-Suarez,L.F. TITLE MEIS1, PREP1, and PBX4 are differentially expressed in acute lymphoblastic leukemia: association of MEIS1 expression with higher proliferation and chemotherapy resistance JOURNAL J. Exp. Clin. Cancer Res. 30, 112 (2011) PUBMED 22185299 REMARK GeneRIF: High levels of MEIS1 and PREP1, and low levels of PBX4 expression were founded in samples of patients with ALL. Publication Status: Online-Only REFERENCE 5 (bases 1 to 4997) AUTHORS Bernardi,E., Deflorian,G., Pezzimenti,F., Diaz,V.M., Mione,M. and Blasi,F. TITLE Characterization of the regulatory region of the zebrafish Prep1.1 gene: analogies to the promoter of the human PREP1 JOURNAL PLoS ONE 5 (12), E15047 (2010) PUBMED 21203543 REMARK GeneRIF: analysis of the regulatory region of the zebrafish Prep1.1 gene and the promoter of human PREP1 Erratum:[PLoS One. 2011;6(4). doi:10.1371/annotation/6de90ec9-0314-40ec-b634-27373373aabc. Pezzinenti, Federica [corrected to Pezzimenti, Federica]] Publication Status: Online-Only REFERENCE 6 (bases 1 to 4997) AUTHORS Berthelsen,J., Viggiano,L., Schulz,H., Ferretti,E., Consalez,G.G., Rocchi,M. and Blasi,F. TITLE PKNOX1, a gene encoding PREP1, a new regulator of Pbx activity, maps on human chromosome 21q22.3 and murine chromosome 17B/C JOURNAL Genomics 47 (2), 323-324 (1998) PUBMED 9479508 REFERENCE 7 (bases 1 to 4997) AUTHORS LeBrun,D.P., Matthews,B.P., Feldman,B.J. and Cleary,M.L. TITLE The chimeric oncoproteins E2A-PBX1 and E2A-HLF are concentrated within spherical nuclear domains JOURNAL Oncogene 15 (17), 2059-2067 (1997) PUBMED 9366523 REFERENCE 8 (bases 1 to 4997) AUTHORS Chen,H., Rossier,C., Nakamura,Y., Lynn,A., Chakravarti,A. and Antonarakis,S.E. TITLE Cloning of a novel homeobox-containing gene, PKNOX1, and mapping to human chromosome 21q22.3 JOURNAL Genomics 41 (2), 193-200 (1997) PUBMED 9143494 REFERENCE 9 (bases 1 to 4997) AUTHORS Phelan,M.L. and Featherstone,M.S. TITLE Distinct HOX N-terminal arm residues are responsible for specificity of DNA recognition by HOX monomers and HOX.PBX heterodimers JOURNAL J. Biol. Chem. 272 (13), 8635-8643 (1997) PUBMED 9079695 REFERENCE 10 (bases 1 to 4997) AUTHORS Chang,C.P., Shen,W.F., Rozenfeld,S., Lawrence,H.J., Largman,C. and Cleary,M.L. TITLE Pbx proteins display hexapeptide-dependent cooperative DNA binding with a subset of Hox proteins JOURNAL Genes Dev. 9 (6), 663-674 (1995) PUBMED 7729685 COMMENT VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from AY196965.1, BC000735.2 and AA133342.1. On Oct 9, 2003 this sequence version replaced gi:28866954. Publication Note: This RefSeq record includes a subset of the publications that are available for this gene. Please see the Gene record to access additional publications. ##Evidence-Data-START## Transcript exon combination :: Y13613.1 [ECO:0000332] RNAseq introns :: single sample supports all introns ERS025084, ERS025085 [ECO:0000348] ##Evidence-Data-END## COMPLETENESS: complete on the 3' end. PRIMARY REFSEQ_SPAN PRIMARY_IDENTIFIER PRIMARY_SPAN COMP 1-31 AY196965.1 1-31 32-132 BC000735.2 1-101 133-4950 AY196965.1 134-4951 4951-4997 AA133342.1 1-47 c FEATURES Location/Qualifiers source 1..4997 /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /chromosome="21" /map="21q22.3" gene 1..4997 /gene="PKNOX1" /gene_synonym="pkonx1c; PREP1" /note="PBX/knotted 1 homeobox 1" /db_xref="GeneID:5316" /db_xref="HGNC:9022" /db_xref="HPRD:03653" /db_xref="MIM:602100" exon 1..132 /gene="PKNOX1" /gene_synonym="pkonx1c; PREP1" /inference="alignment:Splign:1.39.8" exon 133..239 /gene="PKNOX1" /gene_synonym="pkonx1c; PREP1" /inference="alignment:Splign:1.39.8" variation 141 /gene="PKNOX1" /gene_synonym="pkonx1c; PREP1" /replace="c" /replace="t" /db_xref="dbSNP:75994231" variation 151 /gene="PKNOX1" /gene_synonym="pkonx1c; PREP1" /replace="c" /replace="t" /db_xref="dbSNP:371201606" variation 157 /gene="PKNOX1" /gene_synonym="pkonx1c; PREP1" /replace="c" /replace="t" /db_xref="dbSNP:370866616" variation 175 /gene="PKNOX1" /gene_synonym="pkonx1c; PREP1" /replace="a" /replace="g" /db_xref="dbSNP:201947360" misc_feature 183..185 /gene="PKNOX1" /gene_synonym="pkonx1c; PREP1" /note="upstream in-frame stop codon" variation 187 /gene="PKNOX1" /gene_synonym="pkonx1c; PREP1" /replace="a" /replace="c" /db_xref="dbSNP:146858763" CDS 189..1499 /gene="PKNOX1" /gene_synonym="pkonx1c; PREP1" /note="Pbx regulating protein-1; human homeobox-containing protein; PBX/knotted homeobox 1; homeobox protein PREP-1" /codon_start=1 /product="homeobox protein PKNOX1" /protein_id="NP_004562.2" /db_xref="GI:28866955" /db_xref="CCDS:CCDS13692.1" /db_xref="GeneID:5316" /db_xref="HGNC:9022" /db_xref="HPRD:03653" /db_xref="MIM:602100" /translation="
MMATQTLSIDSYQDGQQMQVVTELKTEQDPNCSEPDAEGVSPPPVESQTPMDVDKQAIYRHPLFPLLALLFEKCEQSTQGSEGTTSASFDVDIENFVRKQEKEGKPFFCEDPETDNLMVKAIQVLRIHLLELEKVNELCKDFCSRYIACLKTKMNSETLLSGEPGSPYSPVQSQQIQSAITGTISPQGIVVPASALQQGNVAMATVAGGTVYQPVTVVTPQGQVVTQTLSPGTIRIQNSQLQLQLNQDLSILHQDDGSSKNKRGVLPKHATNVMRSWLFQHIGHPYPTEDEKKQIAAQTNLTLLQVNNWFINARRRILQPMLDSSCSETPKTKKKTAQNRPVQRFWPDSIASGVAQPPPSELTMSEGAVVTITTPVNMNVDSLQSLSSDGATLAVQQVMMAGQSEDESVDSTEEDAGALAPAHISGLVLENSDSLQ
" misc_feature 966..1136 /gene="PKNOX1" /gene_synonym="pkonx1c; PREP1" /note="Homeodomain; DNA binding domains involved in the transcriptional regulation of key eukaryotic developmental processes; may bind to DNA as monomers or as homo- and/or heterodimers, in a sequence-specific manner; Region: homeodomain; cd00086" /db_xref="CDD:28970" misc_feature order(966..980,984..986,1044..1046,1062..1064,1101..1103, 1107..1112,1119..1124,1128..1136) /gene="PKNOX1" /gene_synonym="pkonx1c; PREP1" /note="DNA binding site [nucleotide binding]" /db_xref="CDD:28970" misc_feature order(972..974,981..983,1110..1112,1119..1124,1131..1133) /gene="PKNOX1" /gene_synonym="pkonx1c; PREP1" /note="specific DNA base contacts [nucleotide binding]; other site" /db_xref="CDD:28970" misc_feature 189..191 /gene="PKNOX1" /gene_synonym="pkonx1c; PREP1" /note="variably annotated as translation start" variation 207 /gene="PKNOX1" /gene_synonym="pkonx1c; PREP1" /replace="c" /replace="t" /db_xref="dbSNP:372802718" exon 240..367 /gene="PKNOX1" /gene_synonym="pkonx1c; PREP1" /inference="alignment:Splign:1.39.8" variation 249 /gene="PKNOX1" /gene_synonym="pkonx1c; PREP1" /replace="c" /replace="g" /db_xref="dbSNP:140607342" variation 293 /gene="PKNOX1" /gene_synonym="pkonx1c; PREP1" /replace="c" /replace="t" /db_xref="dbSNP:143734009" variation 314 /gene="PKNOX1" /gene_synonym="pkonx1c; PREP1" /replace="c" /replace="t" /db_xref="dbSNP:374571145" variation 326 /gene="PKNOX1" /gene_synonym="pkonx1c; PREP1" /replace="a" /replace="g" /db_xref="dbSNP:368748336" variation 337 /gene="PKNOX1" /gene_synonym="pkonx1c; PREP1" /replace="c" /replace="t" /db_xref="dbSNP:371041625" exon 368..539 /gene="PKNOX1" /gene_synonym="pkonx1c; PREP1" /inference="alignment:Splign:1.39.8" variation 396 /gene="PKNOX1" /gene_synonym="pkonx1c; PREP1" /replace="c" /replace="t" /db_xref="dbSNP:201874498" variation 424 /gene="PKNOX1" /gene_synonym="pkonx1c; PREP1" /replace="a" /replace="t" /db_xref="dbSNP:148113718" variation 497 /gene="PKNOX1" /gene_synonym="pkonx1c; PREP1" /replace="a" /replace="c" /db_xref="dbSNP:376583194" variation 530 /gene="PKNOX1" /gene_synonym="pkonx1c; PREP1" /replace="c" /replace="t" /db_xref="dbSNP:234781" exon 540..710 /gene="PKNOX1" /gene_synonym="pkonx1c; PREP1" /inference="alignment:Splign:1.39.8" variation 565 /gene="PKNOX1" /gene_synonym="pkonx1c; PREP1" /replace="a" /replace="g" /db_xref="dbSNP:9976017" variation 638 /gene="PKNOX1" /gene_synonym="pkonx1c; PREP1" /replace="a" /replace="g" /db_xref="dbSNP:373121569" variation 644 /gene="PKNOX1" /gene_synonym="pkonx1c; PREP1" /replace="a" /replace="c" /db_xref="dbSNP:76879928" exon 711..810 /gene="PKNOX1" /gene_synonym="pkonx1c; PREP1" /inference="alignment:Splign:1.39.8" variation 716 /gene="PKNOX1" /gene_synonym="pkonx1c; PREP1" /replace="c" /replace="t" /db_xref="dbSNP:113230836" variation 764 /gene="PKNOX1" /gene_synonym="pkonx1c; PREP1" /replace="a" /replace="g" /db_xref="dbSNP:200529595" variation 767 /gene="PKNOX1" /gene_synonym="pkonx1c; PREP1" /replace="a" /replace="g" /db_xref="dbSNP:372301185" variation 770 /gene="PKNOX1" /gene_synonym="pkonx1c; PREP1" /replace="c" /replace="t" /db_xref="dbSNP:371981717" variation 771 /gene="PKNOX1" /gene_synonym="pkonx1c; PREP1" /replace="a" /replace="g" /db_xref="dbSNP:374463906" variation 772 /gene="PKNOX1" /gene_synonym="pkonx1c; PREP1" /replace="c" /replace="t" /db_xref="dbSNP:199944249" variation 773 /gene="PKNOX1" /gene_synonym="pkonx1c; PREP1" /replace="g" /replace="t" /db_xref="dbSNP:199928026" variation 792 /gene="PKNOX1" /gene_synonym="pkonx1c; PREP1" /replace="a" /replace="c" /replace="g" /db_xref="dbSNP:202114509" variation 799 /gene="PKNOX1" /gene_synonym="pkonx1c; PREP1" /replace="c" /replace="t" /db_xref="dbSNP:201260136" variation 803 /gene="PKNOX1" /gene_synonym="pkonx1c; PREP1" /replace="a" /replace="g" /db_xref="dbSNP:200880395" exon 811..908 /gene="PKNOX1" /gene_synonym="pkonx1c; PREP1" /inference="alignment:Splign:1.39.8" variation 816 /gene="PKNOX1" /gene_synonym="pkonx1c; PREP1" /replace="a" /replace="c" /db_xref="dbSNP:138899005" variation 829 /gene="PKNOX1" /gene_synonym="pkonx1c; PREP1" /replace="c" /replace="g" /db_xref="dbSNP:142921218" variation 834 /gene="PKNOX1" /gene_synonym="pkonx1c; PREP1" /replace="a" /replace="g" /db_xref="dbSNP:17115709" variation 835 /gene="PKNOX1" /gene_synonym="pkonx1c; PREP1" /replace="c" /replace="t" /db_xref="dbSNP:372849442" variation 836 /gene="PKNOX1" /gene_synonym="pkonx1c; PREP1" /replace="a" /replace="g" /db_xref="dbSNP:138151519" variation 840 /gene="PKNOX1" /gene_synonym="pkonx1c; PREP1" /replace="a" /replace="g" /db_xref="dbSNP:377090331" variation 895 /gene="PKNOX1" /gene_synonym="pkonx1c; PREP1" /replace="a" /replace="t" /db_xref="dbSNP:149510960" variation 901 /gene="PKNOX1" /gene_synonym="pkonx1c; PREP1" /replace="a" /replace="c" /db_xref="dbSNP:143921536" exon 909..1037 /gene="PKNOX1" /gene_synonym="pkonx1c; PREP1" /inference="alignment:Splign:1.39.8" variation 973 /gene="PKNOX1" /gene_synonym="pkonx1c; PREP1" /replace="a" /replace="c" /db_xref="dbSNP:373951876" variation 981 /gene="PKNOX1" /gene_synonym="pkonx1c; PREP1" /replace="a" /replace="g" /db_xref="dbSNP:376883451" variation 1001 /gene="PKNOX1" /gene_synonym="pkonx1c; PREP1" /replace="a" /replace="g" /db_xref="dbSNP:148642401" variation 1005 /gene="PKNOX1" /gene_synonym="pkonx1c; PREP1" /replace="a" /replace="g" /db_xref="dbSNP:201583709" variation 1034 /gene="PKNOX1" /gene_synonym="pkonx1c; PREP1" /replace="c" /replace="t" /db_xref="dbSNP:186610951" exon 1038..1114 /gene="PKNOX1" /gene_synonym="pkonx1c; PREP1" /inference="alignment:Splign:1.39.8" exon 1115..1287 /gene="PKNOX1" /gene_synonym="pkonx1c; PREP1" /inference="alignment:Splign:1.39.8" variation 1174 /gene="PKNOX1" /gene_synonym="pkonx1c; PREP1" /replace="a" /replace="c" /db_xref="dbSNP:201879881" variation 1207 /gene="PKNOX1" /gene_synonym="pkonx1c; PREP1" /replace="a" /replace="g" /db_xref="dbSNP:374426020" variation 1212 /gene="PKNOX1" /gene_synonym="pkonx1c; PREP1" /replace="a" /replace="g" /db_xref="dbSNP:377682317" variation 1223 /gene="PKNOX1" /gene_synonym="pkonx1c; PREP1" /replace="c" /replace="t" /db_xref="dbSNP:370652452" variation 1246 /gene="PKNOX1" /gene_synonym="pkonx1c; PREP1" /replace="a" /replace="g" /db_xref="dbSNP:373371183" variation 1257 /gene="PKNOX1" /gene_synonym="pkonx1c; PREP1" /replace="c" /replace="g" /db_xref="dbSNP:376386330" variation 1261 /gene="PKNOX1" /gene_synonym="pkonx1c; PREP1" /replace="c" /replace="t" /db_xref="dbSNP:141136324" variation 1268 /gene="PKNOX1" /gene_synonym="pkonx1c; PREP1" /replace="c" /replace="t" /db_xref="dbSNP:188896357" exon 1288..4976 /gene="PKNOX1" /gene_synonym="pkonx1c; PREP1" /inference="alignment:Splign:1.39.8" variation 1297 /gene="PKNOX1" /gene_synonym="pkonx1c; PREP1" /replace="c" /replace="t" /db_xref="dbSNP:201478576" variation 1323 /gene="PKNOX1" /gene_synonym="pkonx1c; PREP1" /replace="a" /replace="g" /db_xref="dbSNP:146209092" variation 1325 /gene="PKNOX1" /gene_synonym="pkonx1c; PREP1" /replace="c" /replace="t" /db_xref="dbSNP:367682347" variation 1326 /gene="PKNOX1" /gene_synonym="pkonx1c; PREP1" /replace="a" /replace="g" /db_xref="dbSNP:371162644" variation 1355 /gene="PKNOX1" /gene_synonym="pkonx1c; PREP1" /replace="c" /replace="t" /db_xref="dbSNP:372297622" variation 1379 /gene="PKNOX1" /gene_synonym="pkonx1c; PREP1" /replace="a" /replace="g" /db_xref="dbSNP:201263162" variation 1400 /gene="PKNOX1" /gene_synonym="pkonx1c; PREP1" /replace="c" /replace="t" /db_xref="dbSNP:201942352" variation 1436 /gene="PKNOX1" /gene_synonym="pkonx1c; PREP1" /replace="a" /replace="g" /db_xref="dbSNP:150726625" variation 1463 /gene="PKNOX1" /gene_synonym="pkonx1c; PREP1" /replace="c" /replace="t" /db_xref="dbSNP:368363368" variation 1464 /gene="PKNOX1" /gene_synonym="pkonx1c; PREP1" /replace="a" /replace="g" /db_xref="dbSNP:375619701" variation 1469 /gene="PKNOX1" /gene_synonym="pkonx1c; PREP1" /replace="c" /replace="g" /db_xref="dbSNP:140174291" variation 1471 /gene="PKNOX1" /gene_synonym="pkonx1c; PREP1" /replace="c" /replace="t" /db_xref="dbSNP:202131670" variation 1518 /gene="PKNOX1" /gene_synonym="pkonx1c; PREP1" /replace="c" /replace="g" /db_xref="dbSNP:376208238" variation 1525 /gene="PKNOX1" /gene_synonym="pkonx1c; PREP1" /replace="a" /replace="t" /db_xref="dbSNP:371433559" variation 1590 /gene="PKNOX1" /gene_synonym="pkonx1c; PREP1" /replace="a" /replace="g" /db_xref="dbSNP:1064284" variation 1639 /gene="PKNOX1" /gene_synonym="pkonx1c; PREP1" /replace="a" /replace="g" /db_xref="dbSNP:11910392" variation 1659..1676 /gene="PKNOX1" /gene_synonym="pkonx1c; PREP1" /replace="" /replace="gtgtgtgtgt" /replace="gtgtgtgtgtgtgtgtgt" /db_xref="dbSNP:9325621" variation 1659..1674 /gene="PKNOX1" /gene_synonym="pkonx1c; PREP1" /replace="" /replace="gtgtgtgtgtgtgtgt" /db_xref="dbSNP:140608702" variation 1659..1668 /gene="PKNOX1" /gene_synonym="pkonx1c; PREP1" /replace="" /replace="gtgtgtgtgt" /db_xref="dbSNP:36206482" variation 1659..1666 /gene="PKNOX1" /gene_synonym="pkonx1c; PREP1" /replace="" /replace="gtgtgtgt" /db_xref="dbSNP:112515074" variation 1659..1660 /gene="PKNOX1" /gene_synonym="pkonx1c; PREP1" /replace="" /replace="gt" /db_xref="dbSNP:375371332" variation 1676 /gene="PKNOX1" /gene_synonym="pkonx1c; PREP1" /replace="c" /replace="t" /db_xref="dbSNP:73235410" variation 1678 /gene="PKNOX1" /gene_synonym="pkonx1c; PREP1" /replace="c" /replace="t" /db_xref="dbSNP:201243901" variation 1680..1689 /gene="PKNOX1" /gene_synonym="pkonx1c; PREP1" /replace="" /replace="tgtgtgtgtg" /db_xref="dbSNP:58087112" variation 1680 /gene="PKNOX1" /gene_synonym="pkonx1c; PREP1" /replace="c" /replace="t" /db_xref="dbSNP:7278543" variation 1681 /gene="PKNOX1" /gene_synonym="pkonx1c; PREP1" /replace="a" /replace="g" /db_xref="dbSNP:199546143" variation 1682..1691 /gene="PKNOX1" /gene_synonym="pkonx1c; PREP1" /replace="" /replace="tgtgtgtgtgtgtgtgtgtg" /db_xref="dbSNP:370050515" variation 1682 /gene="PKNOX1" /gene_synonym="pkonx1c; PREP1" /replace="c" /replace="t" /db_xref="dbSNP:3838120" variation 1684 /gene="PKNOX1" /gene_synonym="pkonx1c; PREP1" /replace="c" /replace="t" /db_xref="dbSNP:13050372" variation 1690..1699 /gene="PKNOX1" /gene_synonym="pkonx1c; PREP1" /replace="" /replace="tgcgtgtgtg" /db_xref="dbSNP:68042309" variation 1690 /gene="PKNOX1" /gene_synonym="pkonx1c; PREP1" /replace="c" /replace="t" /db_xref="dbSNP:9754199" variation 1694 /gene="PKNOX1" /gene_synonym="pkonx1c; PREP1" /replace="c" /replace="t" /db_xref="dbSNP:113882840" variation 1699..1706 /gene="PKNOX1" /gene_synonym="pkonx1c; PREP1" /replace="" /replace="gcgtgtgt" /db_xref="dbSNP:71808694" variation 1700 /gene="PKNOX1" /gene_synonym="pkonx1c; PREP1" /replace="a" /replace="g" /db_xref="dbSNP:376290612" variation 1723 /gene="PKNOX1" /gene_synonym="pkonx1c; PREP1" /replace="a" /replace="t" /db_xref="dbSNP:62219526" variation 1740 /gene="PKNOX1" /gene_synonym="pkonx1c; PREP1" /replace="c" /replace="t" /db_xref="dbSNP:191844776" variation 1886 /gene="PKNOX1" /gene_synonym="pkonx1c; PREP1" /replace="g" /replace="t" /db_xref="dbSNP:184389988" variation 1938 /gene="PKNOX1" /gene_synonym="pkonx1c; PREP1" /replace="a" /replace="g" /db_xref="dbSNP:371659599" variation 2020 /gene="PKNOX1" /gene_synonym="pkonx1c; PREP1" /replace="a" /replace="g" /db_xref="dbSNP:375725745" variation 2100 /gene="PKNOX1" /gene_synonym="pkonx1c; PREP1" /replace="c" /replace="g" /db_xref="dbSNP:190178128" STS 2195..2296 /gene="PKNOX1" /gene_synonym="pkonx1c; PREP1" /standard_name="WI-16888" /db_xref="UniSTS:56495" STS 2221..2534 /gene="PKNOX1" /gene_synonym="pkonx1c; PREP1" /standard_name="G48510" /db_xref="UniSTS:95570" variation 2224 /gene="PKNOX1" /gene_synonym="pkonx1c; PREP1" /replace="a" /replace="c" /db_xref="dbSNP:181840413" variation 2226 /gene="PKNOX1" /gene_synonym="pkonx1c; PREP1" /replace="c" /replace="t" /db_xref="dbSNP:3403" variation 2337..2345 /gene="PKNOX1" /gene_synonym="pkonx1c; PREP1" /replace="" /replace="aaatttttg" /db_xref="dbSNP:201465872" variation 2345 /gene="PKNOX1" /gene_synonym="pkonx1c; PREP1" /replace="a" /replace="g" /db_xref="dbSNP:17179001" variation 2391 /gene="PKNOX1" /gene_synonym="pkonx1c; PREP1" /replace="a" /replace="g" /db_xref="dbSNP:187372256" variation 2458 /gene="PKNOX1" /gene_synonym="pkonx1c; PREP1" /replace="a" /replace="g" /db_xref="dbSNP:142958691" variation 2516 /gene="PKNOX1" /gene_synonym="pkonx1c; PREP1" /replace="a" /replace="g" /db_xref="dbSNP:151096350" variation 2526 /gene="PKNOX1" /gene_synonym="pkonx1c; PREP1" /replace="a" /replace="g" /db_xref="dbSNP:141034128" variation 2674 /gene="PKNOX1" /gene_synonym="pkonx1c; PREP1" /replace="a" /replace="t" /db_xref="dbSNP:73906406" variation 2699 /gene="PKNOX1" /gene_synonym="pkonx1c; PREP1" /replace="c" /replace="t" /db_xref="dbSNP:234735" variation 2716 /gene="PKNOX1" /gene_synonym="pkonx1c; PREP1" /replace="a" /replace="c" /db_xref="dbSNP:114660881" STS 2875..3147 /gene="PKNOX1" /gene_synonym="pkonx1c; PREP1" /standard_name="G48511" /db_xref="UniSTS:95571" variation 2890 /gene="PKNOX1" /gene_synonym="pkonx1c; PREP1" /replace="c" /replace="g" /db_xref="dbSNP:190541960" variation 3134 /gene="PKNOX1" /gene_synonym="pkonx1c; PREP1" /replace="a" /replace="g" /db_xref="dbSNP:180706691" variation 3164 /gene="PKNOX1" /gene_synonym="pkonx1c; PREP1" /replace="a" /replace="g" /db_xref="dbSNP:77084451" variation 3187 /gene="PKNOX1" /gene_synonym="pkonx1c; PREP1" /replace="c" /replace="t" /db_xref="dbSNP:185094154" variation 3200 /gene="PKNOX1" /gene_synonym="pkonx1c; PREP1" /replace="a" /replace="g" /db_xref="dbSNP:234736" variation 3223..3224 /gene="PKNOX1" /gene_synonym="pkonx1c; PREP1" /replace="" /replace="a" /db_xref="dbSNP:34926274" variation 3267..3268 /gene="PKNOX1" /gene_synonym="pkonx1c; PREP1" /replace="" /replace="t" /db_xref="dbSNP:72262444" variation 3285 /gene="PKNOX1" /gene_synonym="pkonx1c; PREP1" /replace="a" /replace="g" /db_xref="dbSNP:7275621" variation 3354 /gene="PKNOX1" /gene_synonym="pkonx1c; PREP1" /replace="c" /replace="t" /db_xref="dbSNP:189999648" STS 3395..3528 /gene="PKNOX1" /gene_synonym="pkonx1c; PREP1" /standard_name="D17S610" /db_xref="UniSTS:46230" variation 3405 /gene="PKNOX1" /gene_synonym="pkonx1c; PREP1" /replace="a" /replace="g" /db_xref="dbSNP:182583263" variation 3409 /gene="PKNOX1" /gene_synonym="pkonx1c; PREP1" /replace="a" /replace="g" /db_xref="dbSNP:141598564" variation 3474 /gene="PKNOX1" /gene_synonym="pkonx1c; PREP1" /replace="g" /replace="t" /db_xref="dbSNP:185619229" variation 3478 /gene="PKNOX1" /gene_synonym="pkonx1c; PREP1" /replace="a" /replace="g" /db_xref="dbSNP:191760056" variation 3507 /gene="PKNOX1" /gene_synonym="pkonx1c; PREP1" /replace="c" /replace="t" /db_xref="dbSNP:111320868" variation 3550 /gene="PKNOX1" /gene_synonym="pkonx1c; PREP1" /replace="a" /replace="g" /db_xref="dbSNP:138122466" variation 3552 /gene="PKNOX1" /gene_synonym="pkonx1c; PREP1" /replace="c" /replace="t" /db_xref="dbSNP:376485356" variation 3613 /gene="PKNOX1" /gene_synonym="pkonx1c; PREP1" /replace="c" /replace="t" /db_xref="dbSNP:374505547" variation 3688 /gene="PKNOX1" /gene_synonym="pkonx1c; PREP1" /replace="c" /replace="t" /db_xref="dbSNP:183636018" variation 3689 /gene="PKNOX1" /gene_synonym="pkonx1c; PREP1" /replace="g" /replace="t" /db_xref="dbSNP:189023859" variation 3693 /gene="PKNOX1" /gene_synonym="pkonx1c; PREP1" /replace="a" /replace="g" /db_xref="dbSNP:149542189" variation 3709 /gene="PKNOX1" /gene_synonym="pkonx1c; PREP1" /replace="c" /replace="t" /db_xref="dbSNP:376936054" variation 3712..3713 /gene="PKNOX1" /gene_synonym="pkonx1c; PREP1" /replace="" /replace="tccctcaccaccctccgtctcttcg" /db_xref="dbSNP:141407897" variation 3727..3728 /gene="PKNOX1" /gene_synonym="pkonx1c; PREP1" /replace="" /replace="ac" /db_xref="dbSNP:71195909" variation 3729 /gene="PKNOX1" /gene_synonym="pkonx1c; PREP1" /replace="a" /replace="g" /db_xref="dbSNP:112957555" variation 3737..3738 /gene="PKNOX1" /gene_synonym="pkonx1c; PREP1" /replace="" /replace="tccctcaccaccctccgtctcttcg" /db_xref="dbSNP:74278009" variation 3737 /gene="PKNOX1" /gene_synonym="pkonx1c; PREP1" /replace="a" /replace="g" /db_xref="dbSNP:76064267" variation 3743 /gene="PKNOX1" /gene_synonym="pkonx1c; PREP1" /replace="c" /replace="t" /db_xref="dbSNP:378528" variation 3763 /gene="PKNOX1" /gene_synonym="pkonx1c; PREP1" /replace="g" /replace="t" /db_xref="dbSNP:148255872" variation 3864 /gene="PKNOX1" /gene_synonym="pkonx1c; PREP1" /replace="a" /replace="g" /db_xref="dbSNP:193098398" variation 3877 /gene="PKNOX1" /gene_synonym="pkonx1c; PREP1" /replace="a" /replace="g" /db_xref="dbSNP:117553406" variation 3996 /gene="PKNOX1" /gene_synonym="pkonx1c; PREP1" /replace="c" /replace="t" /db_xref="dbSNP:374503004" variation 4051 /gene="PKNOX1" /gene_synonym="pkonx1c; PREP1" /replace="a" /replace="g" /db_xref="dbSNP:234737" variation 4053 /gene="PKNOX1" /gene_synonym="pkonx1c; PREP1" /replace="c" /replace="g" /db_xref="dbSNP:141253574" variation 4101 /gene="PKNOX1" /gene_synonym="pkonx1c; PREP1" /replace="c" /replace="t" /db_xref="dbSNP:234738" variation 4126 /gene="PKNOX1" /gene_synonym="pkonx1c; PREP1" /replace="g" /replace="t" /db_xref="dbSNP:234739" variation 4156 /gene="PKNOX1" /gene_synonym="pkonx1c; PREP1" /replace="c" /replace="g" /db_xref="dbSNP:2839628" variation 4234 /gene="PKNOX1" /gene_synonym="pkonx1c; PREP1" /replace="c" /replace="t" /db_xref="dbSNP:146227772" variation 4236 /gene="PKNOX1" /gene_synonym="pkonx1c; PREP1" /replace="c" /replace="g" /db_xref="dbSNP:234740" variation 4287 /gene="PKNOX1" /gene_synonym="pkonx1c; PREP1" /replace="a" /replace="g" /db_xref="dbSNP:371201755" variation 4310 /gene="PKNOX1" /gene_synonym="pkonx1c; PREP1" /replace="a" /replace="g" /db_xref="dbSNP:2839629" variation 4344 /gene="PKNOX1" /gene_synonym="pkonx1c; PREP1" /replace="c" /replace="g" /db_xref="dbSNP:115975867" variation 4378..4379 /gene="PKNOX1" /gene_synonym="pkonx1c; PREP1" /replace="" /replace="c" /db_xref="dbSNP:111813527" variation 4427..4429 /gene="PKNOX1" /gene_synonym="pkonx1c; PREP1" /replace="" /replace="ttc" /db_xref="dbSNP:370890678" variation 4537 /gene="PKNOX1" /gene_synonym="pkonx1c; PREP1" /replace="c" /replace="g" /db_xref="dbSNP:78748402" variation 4565..4566 /gene="PKNOX1" /gene_synonym="pkonx1c; PREP1" /replace="ca" /replace="tg" /db_xref="dbSNP:34670122" variation 4565 /gene="PKNOX1" /gene_synonym="pkonx1c; PREP1" /replace="a" /replace="g" /db_xref="dbSNP:438889" variation 4566 /gene="PKNOX1" /gene_synonym="pkonx1c; PREP1" /replace="a" /replace="g" /db_xref="dbSNP:373477" variation 4573 /gene="PKNOX1" /gene_synonym="pkonx1c; PREP1" /replace="g" /replace="t" /db_xref="dbSNP:375586060" variation 4590 /gene="PKNOX1" /gene_synonym="pkonx1c; PREP1" /replace="c" /replace="t" /db_xref="dbSNP:116177078" variation 4660 /gene="PKNOX1" /gene_synonym="pkonx1c; PREP1" /replace="c" /replace="g" /db_xref="dbSNP:7936" STS 4720..4863 /gene="PKNOX1" /gene_synonym="pkonx1c; PREP1" /standard_name="STS-T84037" /db_xref="UniSTS:80586" STS 4740..4864 /gene="PKNOX1" /gene_synonym="pkonx1c; PREP1" /standard_name="D21S1938" /db_xref="UniSTS:21289" STS 4769..4867 /gene="PKNOX1" /gene_synonym="pkonx1c; PREP1" /standard_name="SHGC-52028" /db_xref="UniSTS:4030" variation 4820 /gene="PKNOX1" /gene_synonym="pkonx1c; PREP1" /replace="a" /replace="g" /db_xref="dbSNP:182159151" variation 4828..4834 /gene="PKNOX1" /gene_synonym="pkonx1c; PREP1" /replace="" /replace="ttcgttc" /db_xref="dbSNP:144928489" variation 4829..4835 /gene="PKNOX1" /gene_synonym="pkonx1c; PREP1" /replace="" /replace="tcgttct" /db_xref="dbSNP:55923175" variation 4834 /gene="PKNOX1" /gene_synonym="pkonx1c; PREP1" /replace="" /replace="ttcgttc" /db_xref="dbSNP:72003656" variation 4846 /gene="PKNOX1" /gene_synonym="pkonx1c; PREP1" /replace="a" /replace="g" /db_xref="dbSNP:186840063" variation 4857 /gene="PKNOX1" /gene_synonym="pkonx1c; PREP1" /replace="c" /replace="t" /db_xref="dbSNP:139203375" polyA_signal 4958..4963 /gene="PKNOX1" /gene_synonym="pkonx1c; PREP1" polyA_site 4975 /gene="PKNOX1" /gene_synonym="pkonx1c; PREP1" polyA_site 4976 /gene="PKNOX1" /gene_synonym="pkonx1c; PREP1" ORIGIN
gcgtcgccctcctcccattgagcgaggctgtgtcgcgtggcccagcgtcggcgtgacggttggacgcgggcgcggcactgcgggtcccgattgctgcagccgcttgtcagtgtgatgaagattggcacccagacaccattcgcttttcacccaagatgatttgatgtcttataaaactctgatgaaccatgatggctacacagacattaagtatagacagctatcaagatgggcaacagatgcaagtagtaacagagttaaagacagaacaagatccaaactgctctgaacccgatgcagaaggagtgagccctccccctgtggagtctcagaccccgatggatgtggacaagcaggccatttataggcatccactatttccattattagctttgttgtttgaaaaatgtgaacaatctacacagggctctgaaggcacaacttctgccagttttgatgtagacatcgaaaattttgtaagaaagcaagagaaggaagggaaacctttcttttgtgaagatccagaaactgataatttaatggtaaaagcaatccaggttttgcgcattcatcttcttgagctggaaaaggttaacgaactctgcaaagatttctgcagtcgatacattgcttgtctgaaaacaaaaatgaacagtgaaactctgttgagtggagagcctggaagcccgtactcaccagtgcagtcccagcagattcaaagtgccatcacaggcaccatcagccctcagggaattgtggtgccggcgtccgcgctgcagcagggaaacgtagccatggcgacggtggcaggtggcacagtgtatcagcctgtcacggtcgtcactccccaaggccaagtggtcacacagacattgtcgcctgggacaattaggatccagaactcccagcttcagttacagttaaaccaagatctcagcatcttgcatcaagatgatggttcatctaagaacaagaggggcgtcctgccaaagcatgccacgaacgtgatgcggtcctggctcttccagcacatcgggcatccctacccaacagaggatgagaaaaaacagattgctgctcagacaaatttgacactactccaagtcaacaactggttcatcaatgccagaagacgaattcttcagccaatgttggattcaagttgttcagagacccccaaaacaaagaaaaaaactgctcagaaccggccagttcagaggttttggcctgattctattgcatcaggagtcgcacagccaccgccgagcgagctcaccatgtcggaaggagctgttgtcaccatcaccacgcccgtgaacatgaacgtggacagccttcagtctctgtcctcggacggggccaccctggcggtgcagcaggtcatgatggcagggcagagcgaggacgagtctgtggacagcacagaggaggatgcgggtgccctggcccctgcccacatcagcgggctggtcttggagaacagtgactccctgcagtaggggcaggagcagacgcacctgactttttggagtttgcacagcaaacattttacacagttttatttctaatatgttttatatgtagatatagaagagtgcacttttgtatttcatagtaagcttaaagcgcgtctttgccggtgcagcgacttctttcaagtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgcgtgtgtgcgtgtgtgtggatttttaaagaaattctttaaaggtttaacgctagattgtgaggaatgacacaccactccctccccaccttgaatccctaattagattaaggaatagcgctgccattttctaaaccgtgatgcggttgtcacttagttctgtggttccagcagatctcagtgggctggttgatttgtgtggcccatggatttgaaagaagctgctgcacccgaaactgccagtgtgcggtgacaacggcacacgcctagactgagtgtggtttcgtcgtgagtggatggacggcaagcttagcaagcctaagtcccctcatgttcagtgagcctgtttcatttgctatatagaaaaagaaactcctatttttaccttgctggaattattggataaaaaagctatttttataaattcgttatgaattggatgatgactatattgaggataaaatttctagagaagaaacaatacatgcttgctattaatatttcaatttggaatgttctgaattgaccaaatttaatgaacctgcccaaagttagctaccgttccatggttctttgctctccccgggtagtgatgaacatttactactataaaagaaacagctatttaatgaaattttgatatctgcaaatttttgttgatatgtaatgctcagattgcattttacacttgatctaaacatatatcgaaagatatctgctaaacaggacttcaggtaagtgaggtgaaatggtagccagtgacccgttaggagctctcaccgtacatactccagtctaatttaaatctgaccacagttgcatggtcgctttaccatgttagctgtgtattgttttaaaagttttaacttcaaaatatgttatgcacagaatgtttattataaactaatataaaatgtgctctaccccattggctcagagctagggcaaacagcagatattcagactttattacttaactagcggacatccctggagtcccagcagcgagctggtctggcgagggcacctcggcagcccccacgggttggctcctacgtttgcgtttgtggctggtctcctggtgtcagtgttctcttgtacgttgttgctttcgacttttcagagccctcctgctcacttgaccacgtgagatttggaataactgtaggacttctgtttcctggtaacaagatgaaccgagagagtgggctgggttctgttttctttggttttgatttgttttcattgtttacttaggagtggtgctttttctcagaaaacaggccacggtgtttcatacagaatgtcttcatatcatctgaaatggtatggctgaagttcatttgtttacagggtcgggaatgtcttcagttcttgagagtcaacagtaatgattggttgtaagccaagggacattttaagctagtgaagagttttttctggaattgatttttcccaaaagaatatattaattgaggttaagaagtcagtgggaaacacacagaaatttgttttaaaatctttcaggagctttactgaaagacttggttatcaagtcttttggggagagaatgacattttttttttgagacagagttttgctcttgttgcccaggctggagggcaatggtgcaatctcagctcactgcaacctccacctcttatgttcaagcaattctccttccttagcctcctgagtagctgggattacaggcatgcgccaccacacccggctaattttgtatttttagtagagatgggtttctccatgttggtcgggctggtctcgaactcccgacctcaggtgatctgcctgcctcagcctcccaaagtgctgggattacaggtgtgagccaccgcgcccggccgagaatgacatcttaaagccaccattgcgttcctcatttgtgaactgtcttctcatattttaagtcaagtctataagatcatttttaacctaagttccaactttgttggactccttaaaataagcacccatgaaagccagccagcccttcctccttccctcaccaccctccgtctcttcggctgcttgctctttagtgtagattagtggaagccattcacagaatgtagactcatgtataggtcaccgtttctttcccccactagaaatcacattcactaagcagtggattgaatttaagagtgctgcccctgcccggcgcagtagggcgtgcctctagttccagctactcgggagtctgaggcagaggatggcatgtgccaggagtttgaggctgcagtgcactatgcttgcacctgtgaatagccactgcactccatcttgggcaacacagtgagacccccatctataaaaagagagcactgcctgaacctcggtggcactgggaagctctggcctgagagttaaacacccatgctgaatgatacagtgtgcattctctccagctgcaaactttcttcaactttcctaaattcttactaaattcagaggaataggataaagatcacttagagaaagggtgcttatggacatagcctgagtttcctttaacctctctgcaatgggtgcttttaactagcttctacatggcaagctgtttcagtttgcaaaatcactgcccagcatgtttgaggtcagttggcaccttaaaacacctgttctccagcccttggacagtggagagaatctgtaaaagtgtgaccccctctaagatttcgttttaaatgatcagattcggttccagttttattcttgttgagtttttccctatgaaggctccttttgaatgtgtcttgagacccaaattgagcatgttgctgttattcctgccctgcacctgtggagcaggagtggcagggctggctgtgctgggttccagctcgctcccaccgagggactagcttggcctttgcgctttgattccagatagtaagatgagtggaagtgtttatcgagcatgcaaaagaaaccctcacggctaagggctctgggagttgtgtctgtgtgacctgagagtgatccatctcctgcctgtgtgaggtagcagtgggcacttttcattgagacaaactccagggtgtccagagggggttctgccccttgtgaaggcccattcctggcacttagagacagaaagaactcagcaatctttcgttctagttatattcggtctttgaaactgacaatctttgaaatgtgaatactgtaacaatatgttttcttggattgttgtctttaaaaaggatttttgtgaagcaattgatttatcaaagcaaaaaaattaaaaatagaaacttgcaaaaaaaaaaaaaaaaaaaaa
//
ANNOTATIONS from NCBI Entrez Gene (20130726): GeneID:5316 -> Molecular function: GO:0003700 [sequence-specific DNA binding transcription factor activity] evidence: TAS GeneID:5316 -> Molecular function: GO:0003705 [RNA polymerase II distal enhancer sequence-specific DNA binding transcription factor activity] evidence: IEA GeneID:5316 -> Molecular function: GO:0043565 [sequence-specific DNA binding] evidence: IEA GeneID:5316 -> Molecular function: GO:0046982 [protein heterodimerization activity] evidence: IEA GeneID:5316 -> Biological process: GO:0001525 [angiogenesis] evidence: IEA GeneID:5316 -> Biological process: GO:0006366 [transcription from RNA polymerase II promoter] evidence: TAS GeneID:5316 -> Biological process: GO:0030217 [T cell differentiation] evidence: IEA GeneID:5316 -> Biological process: GO:0030218 [erythrocyte differentiation] evidence: IEA GeneID:5316 -> Biological process: GO:0043010 [camera-type eye development] evidence: IEA GeneID:5316 -> Biological process: GO:0045944 [positive regulation of transcription from RNA polymerase II promoter] evidence: IEA GeneID:5316 -> Cellular component: GO:0005667 [transcription factor complex] evidence: IEA GeneID:5316 -> Cellular component: GO:0005737 [cytoplasm] evidence: IEA
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