GGRNA | NM_001191054.1

LOCUS       NM_001191054            1765 bp    mRNA    linear   PRI 17-APR-2013
DEFINITION  Homo sapiens anomalous homeobox (ANHX), mRNA.
ACCESSION   NM_001191054 XR_041592 XR_041593 XR_078473
VERSION     NM_001191054.1  GI:300796648
KEYWORDS    RefSeq.
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
REFERENCE   1  (bases 1 to 1765)
  AUTHORS   Venter,J.C., Adams,M.D., Myers,E.W., Li,P.W., Mural,R.J.,
            Sutton,G.G., Smith,H.O., Yandell,M., Evans,C.A., Holt,R.A.,
            Gocayne,J.D., Amanatides,P., Ballew,R.M., Huson,D.H., Wortman,J.R.,
            Zhang,Q., Kodira,C.D., Zheng,X.H., Chen,L., Skupski,M.,
            Subramanian,G., Thomas,P.D., Zhang,J., Gabor Miklos,G.L.,
            Nelson,C., Broder,S., Clark,A.G., Nadeau,J., McKusick,V.A.,
            Zinder,N., Levine,A.J., Roberts,R.J., Simon,M., Slayman,C.,
            Hunkapiller,M., Bolanos,R., Delcher,A., Dew,I., Fasulo,D.,
            Flanigan,M., Florea,L., Halpern,A., Hannenhalli,S., Kravitz,S.,
            Levy,S., Mobarry,C., Reinert,K., Remington,K., Abu-Threideh,J.,
            Beasley,E., Biddick,K., Bonazzi,V., Brandon,R., Cargill,M.,
            Chandramouliswaran,I., Charlab,R., Chaturvedi,K., Deng,Z., Di
            Francesco,V., Dunn,P., Eilbeck,K., Evangelista,C., Gabrielian,A.E.,
            Gan,W., Ge,W., Gong,F., Gu,Z., Guan,P., Heiman,T.J., Higgins,M.E.,
            Ji,R.R., Ke,Z., Ketchum,K.A., Lai,Z., Lei,Y., Li,Z., Li,J.,
            Liang,Y., Lin,X., Lu,F., Merkulov,G.V., Milshina,N., Moore,H.M.,
            Naik,A.K., Narayan,V.A., Neelam,B., Nusskern,D., Rusch,D.B.,
            Salzberg,S., Shao,W., Shue,B., Sun,J., Wang,Z., Wang,A., Wang,X.,
            Wang,J., Wei,M., Wides,R., Xiao,C., Yan,C., Yao,A., Ye,J., Zhan,M.,
            Zhang,W., Zhang,H., Zhao,Q., Zheng,L., Zhong,F., Zhong,W., Zhu,S.,
            Zhao,S., Gilbert,D., Baumhueter,S., Spier,G., Carter,C.,
            Cravchik,A., Woodage,T., Ali,F., An,H., Awe,A., Baldwin,D.,
            Baden,H., Barnstead,M., Barrow,I., Beeson,K., Busam,D., Carver,A.,
            Center,A., Cheng,M.L., Curry,L., Danaher,S., Davenport,L.,
            Desilets,R., Dietz,S., Dodson,K., Doup,L., Ferriera,S., Garg,N.,
            Gluecksmann,A., Hart,B., Haynes,J., Haynes,C., Heiner,C.,
            Hladun,S., Hostin,D., Houck,J., Howland,T., Ibegwam,C., Johnson,J.,
            Kalush,F., Kline,L., Koduru,S., Love,A., Mann,F., May,D.,
            McCawley,S., McIntosh,T., McMullen,I., Moy,M., Moy,L., Murphy,B.,
            Nelson,K., Pfannkoch,C., Pratts,E., Puri,V., Qureshi,H.,
            Reardon,M., Rodriguez,R., Rogers,Y.H., Romblad,D., Ruhfel,B.,
            Scott,R., Sitter,C., Smallwood,M., Stewart,E., Strong,R., Suh,E.,
            Thomas,R., Tint,N.N., Tse,S., Vech,C., Wang,G., Wetter,J.,
            Williams,S., Williams,M., Windsor,S., Winn-Deen,E., Wolfe,K.,
            Zaveri,J., Zaveri,K., Abril,J.F., Guigo,R., Campbell,M.J.,
            Sjolander,K.V., Karlak,B., Kejariwal,A., Mi,H., Lazareva,B.,
            Hatton,T., Narechania,A., Diemer,K., Muruganujan,A., Guo,N.,
            Sato,S., Bafna,V., Istrail,S., Lippert,R., Schwartz,R., Walenz,B.,
            Yooseph,S., Allen,D., Basu,A., Baxendale,J., Blick,L., Caminha,M.,
            Carnes-Stine,J., Caulk,P., Chiang,Y.H., Coyne,M., Dahlke,C.,
            Mays,A., Dombroski,M., Donnelly,M., Ely,D., Esparham,S., Fosler,C.,
            Gire,H., Glanowski,S., Glasser,K., Glodek,A., Gorokhov,M.,
            Graham,K., Gropman,B., Harris,M., Heil,J., Henderson,S., Hoover,J.,
            Jennings,D., Jordan,C., Jordan,J., Kasha,J., Kagan,L., Kraft,C.,
            Levitsky,A., Lewis,M., Liu,X., Lopez,J., Ma,D., Majoros,W.,
            McDaniel,J., Murphy,S., Newman,M., Nguyen,T., Nguyen,N., Nodell,M.,
            Pan,S., Peck,J., Peterson,M., Rowe,W., Sanders,R., Scott,J.,
            Simpson,M., Smith,T., Sprague,A., Stockwell,T., Turner,R.,
            Venter,E., Wang,M., Wen,M., Wu,D., Wu,M., Xia,A., Zandieh,A. and
            Zhu,X.
  TITLE     The sequence of the human genome
  JOURNAL   Science 291 (5507), 1304-1351 (2001)
   PUBMED   11181995
  REMARK    Erratum:[Science 2001 Jun 5;292(5523):1838]
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            DB032853.1, AK057223.1 and AC226150.5.
            On or before Jul 18, 2010 this sequence version replaced
            gi:239744779, gi:169205079, gi:169205655.
            
            ##Evidence-Data-START##
            Transcript exon combination :: AK057223.1 [ECO:0000332]
            RNAseq introns              :: mixed/partial sample support
                                           ERS025085 [ECO:0000350]
            ##Evidence-Data-END##
            COMPLETENESS: complete on the 3' end.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-596               DB032853.1         1-596
            597-865             AK057223.1         590-858
            866-866             AC226150.5         10431-10431
            867-1088            AK057223.1         860-1081
            1089-1089           AC226150.5         17475-17475
            1090-1244           AK057223.1         1083-1237
            1245-1245           AC226150.5         17942-17942
            1246-1765           AK057223.1         1239-1758
FEATURES             Location/Qualifiers
     source          1..1765
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /db_xref="taxon:9606"
                     /chromosome="12"
                     /map="12q24.33"
     gene            1..1765
                     /gene="ANHX"
                     /note="anomalous homeobox"
                     /db_xref="GeneID:647589"
                     /db_xref="HGNC:40024"
     exon            1..30
                     /gene="ANHX"
                     /inference="alignment:Splign:1.39.8"
     exon            31..301
                     /gene="ANHX"
                     /inference="alignment:Splign:1.39.8"
     CDS             53..1192
                     /gene="ANHX"
                     /note="hCG2007354"
                     /codon_start=1
                     /product="anomalous homeobox protein"
                     /protein_id="NP_001177983.1"
                     /db_xref="GI:300796649"
                     /db_xref="CCDS:CCDS53855.1"
                     /db_xref="GeneID:647589"
                     /db_xref="HGNC:40024"
                     /translation="

MQSFLTLLKEHEDTCAPPAELVTLAGRLCRDFQDDLAQLQPLVTAILDSQLRLHLLDNADVALACARVLDQQEQQQAACRLLEGCQVPGGSQELVQLWNDIHYRLVMRRLGVAALTPVQKFRCRKRNPPPPSLCPEGLKSRNFPREVREKLHNFAVGVNTNPSKAERENLALETSLTPEQVYNWFANYRRRQRALPQHMKPAQQATAEDPGARERGPDLLQPSGNPRVDSGFVDRPQWSEEREEKGPPQSPQTTQGPWEPLALAPDFPADETVSKPLDVSGHPQSVQLEEGLGTSSGRTELRVGSFLVTQPPLQAPEFILTQSPPELAPAPSAFPGPVSAMELSQALPSSQVQCSDSQASGDAFWGARMLLEFSGSSLG

"
     misc_feature    467..631
                     /gene="ANHX"
                     /note="Homeodomain;  DNA binding domains involved in the
                     transcriptional regulation of key eukaryotic developmental
                     processes; may bind to DNA as monomers or as homo- and/or
                     heterodimers, in a sequence-specific manner; Region:
                     homeodomain; cd00086"
                     /db_xref="CDD:28970"
     misc_feature    order(467..475,479..481,533..535,551..553,590..592,
                     596..601,608..613,617..625,629..631)
                     /gene="ANHX"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:28970"
     misc_feature    order(467..469,476..478,599..601,608..613,620..622)
                     /gene="ANHX"
                     /note="specific DNA base contacts [nucleotide binding];
                     other site"
                     /db_xref="CDD:28970"
     exon            302..429
                     /gene="ANHX"
                     /inference="alignment:Splign:1.39.8"
     exon            430..553
                     /gene="ANHX"
                     /inference="alignment:Splign:1.39.8"
     exon            554..770
                     /gene="ANHX"
                     /inference="alignment:Splign:1.39.8"
     exon            771..891
                     /gene="ANHX"
                     /inference="alignment:Splign:1.39.8"
     exon            892..1020
                     /gene="ANHX"
                     /inference="alignment:Splign:1.39.8"
     exon            1021..1105
                     /gene="ANHX"
                     /inference="alignment:Splign:1.39.8"
     exon            1106..1765
                     /gene="ANHX"
                     /inference="alignment:Splign:1.39.8"
     variation       1210
                     /gene="ANHX"
                     /replace="c"
                     /replace="g"
                     /db_xref="dbSNP:369420171"
     STS             1443..1564
                     /gene="ANHX"
                     /standard_name="RH99248"
                     /db_xref="UniSTS:88188"
ORIGIN

gtgcgccggcgctgaagcgggtcccggaggagtggccacgacccagcacaggatgcagagcttcctgactctgctgaaggagcatgaggacacctgtgcacccccggcggagctggtgacccttgcgggcagactgtgccgggacttccaggatgaccttgcccaactgcagcctttggtcacagccattctggacagccagctccgcctgcatctcctggacaacgcagatgtggccctggcgtgcgcccgtgtcctggaccagcaggagcagcagcaggcggcttgccgcctcctggaggggtgccaggtgccgggaggcagccaggagttagtgcagctctggaacgacatccactaccgtctggtcatgaggaggctgggcgtggctgcgctcaccccggtgcagaagttccgctgcaggaagaggaaccccccgcccccctccctctgcccagaggggctgaagagccggaacttccccagagaggttcgtgagaagctgcacaatttcgctgtgggggtgaacaccaaccccagcaaggctgagagggagaacttggcattggagacgagcttgacccctgagcaggtgtacaactggtttgccaattaccggcgccgccaaagagcccttccccagcacatgaagccagcccagcaggccacagctgaagaccctggtgcgagggagaggggtcctgacctcctgcagccctcaggcaacccccgtgttgactctgggtttgtggacaggcctcagtggtcagaggaacgtgaggaaaaggggcctccacagtccccacagaccacccaaggaccatgggagccactggccttagccccggactttcccgcagatgagacagtctcaaagccactggatgtcagcggccatccccagagcgtgcaattggaggagggtctgggcacaagcagtggacggacagagctacgggtgggcagcttcctggtgacacagcccccactgcaagctcctgaattcatcctcacccagagccctccagagctggccccagccccatctgccttccccggccctgtgtctgccatggagctgagccaggccctgccctccagccaggtgcagtgttctgatagccaggcctctggtgatgccttctggggagccaggatgctccttgagttttcagggagcagcctgggctgagctatccccaggagccagacagcaccccaggaggagcgggtgtggatggtctgcctggtcaacacaaggagttacagagctttatcctgaatacaaaatgaaggtccccagagttcccctgggggctctgctgaaaagcagagattctttcccactgccatgtttgaatagtttggttagcaattccctgtagtagagaaagcatttgagaaatgttcgtgagatcagaagtcaaaggtgggtctgtcccactcacgcagcactggatcagtcgggctccggggcactcgtgcagagaaggccattctagagaggggagtgttctgctgctggctgccttgccgtctgcccgtgcacacagccagacttttccaccaagttaactgagtgaggtatgaggagtgttctgagatttctgtgtgtaggggcttctcccttgagtactgggaggcaaacctgtctgcgaatggcctaggcagggcagagtagggtggattttccctccaggttgtaattcactgtgtctatgacacaaatgttgtagtcaattaaagtttaatgttttgaactccc

//

Annotations: