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2025-05-09 19:52:15, GGRNA : RefSeq release 60 (20130726)
LOCUS NM_145206 4401 bp mRNA linear PRI 15-JUN-2013
DEFINITION Homo sapiens vesicle transport through interaction with t-SNAREs 1A
(VTI1A), mRNA.
ACCESSION NM_145206
VERSION NM_145206.2 GI:113374155
KEYWORDS RefSeq.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 4401)
AUTHORS Gourraud,P.A., Sdika,M., Khankhanian,P., Henry,R.G., Beheshtian,A.,
Matthews,P.M., Hauser,S.L., Oksenberg,J.R., Pelletier,D. and
Baranzini,S.E.
TITLE A genome-wide association study of brain lesion distribution in
multiple sclerosis
JOURNAL Brain 136 (PT 4), 1012-1024 (2013)
PUBMED 23412934
REFERENCE 2 (bases 1 to 4401)
AUTHORS Lan,Q., Hsiung,C.A., Matsuo,K., Hong,Y.C., Seow,A., Wang,Z.,
Hosgood,H.D. III, Chen,K., Wang,J.C., Chatterjee,N., Hu,W.,
Wong,M.P., Zheng,W., Caporaso,N., Park,J.Y., Chen,C.J., Kim,Y.H.,
Kim,Y.T., Landi,M.T., Shen,H., Lawrence,C., Burdett,L., Yeager,M.,
Yuenger,J., Jacobs,K.B., Chang,I.S., Mitsudomi,T., Kim,H.N.,
Chang,G.C., Bassig,B.A., Tucker,M., Wei,F., Yin,Z., Wu,C., An,S.J.,
Qian,B., Lee,V.H., Lu,D., Liu,J., Jeon,H.S., Hsiao,C.F., Sung,J.S.,
Kim,J.H., Gao,Y.T., Tsai,Y.H., Jung,Y.J., Guo,H., Hu,Z.,
Hutchinson,A., Wang,W.C., Klein,R., Chung,C.C., Oh,I.J., Chen,K.Y.,
Berndt,S.I., He,X., Wu,W., Chang,J., Zhang,X.C., Huang,M.S.,
Zheng,H., Wang,J., Zhao,X., Li,Y., Choi,J.E., Su,W.C., Park,K.H.,
Sung,S.W., Shu,X.O., Chen,Y.M., Liu,L., Kang,C.H., Hu,L.,
Chen,C.H., Pao,W., Kim,Y.C., Yang,T.Y., Xu,J., Guan,P., Tan,W.,
Su,J., Wang,C.L., Li,H., Sihoe,A.D., Zhao,Z., Chen,Y., Choi,Y.Y.,
Hung,J.Y., Kim,J.S., Yoon,H.I., Cai,Q., Lin,C.C., Park,I.K., Xu,P.,
Dong,J., Kim,C., He,Q., Perng,R.P., Kohno,T., Kweon,S.S.,
Chen,C.Y., Vermeulen,R., Wu,J., Lim,W.Y., Chen,K.C., Chow,W.H.,
Ji,B.T., Chan,J.K., Chu,M., Li,Y.J., Yokota,J., Li,J., Chen,H.,
Xiang,Y.B., Yu,C.J., Kunitoh,H., Wu,G., Jin,L., Lo,Y.L.,
Shiraishi,K., Chen,Y.H., Lin,H.C., Wu,T., Wu,Y.L., Yang,P.C.,
Zhou,B., Shin,M.H., Fraumeni,J.F. Jr., Lin,D., Chanock,S.J. and
Rothman,N.
TITLE Genome-wide association analysis identifies new lung cancer
susceptibility loci in never-smoking women in Asia
JOURNAL Nat. Genet. 44 (12), 1330-1335 (2012)
PUBMED 23143601
REFERENCE 3 (bases 1 to 4401)
AUTHORS Bass,A.J., Lawrence,M.S., Brace,L.E., Ramos,A.H., Drier,Y.,
Cibulskis,K., Sougnez,C., Voet,D., Saksena,G., Sivachenko,A.,
Jing,R., Parkin,M., Pugh,T., Verhaak,R.G., Stransky,N.,
Boutin,A.T., Barretina,J., Solit,D.B., Vakiani,E., Shao,W.,
Mishina,Y., Warmuth,M., Jimenez,J., Chiang,D.Y., Signoretti,S.,
Kaelin,W.G., Spardy,N., Hahn,W.C., Hoshida,Y., Ogino,S.,
Depinho,R.A., Chin,L., Garraway,L.A., Fuchs,C.S., Baselga,J.,
Tabernero,J., Gabriel,S., Lander,E.S., Getz,G. and Meyerson,M.
TITLE Genomic sequencing of colorectal adenocarcinomas identifies a
recurrent VTI1A-TCF7L2 fusion
JOURNAL Nat. Genet. 43 (10), 964-968 (2011)
PUBMED 21892161
REMARK GeneRIF: We found a colorectal carcinoma cell line harboring the
fusion gene to be dependent on VTI1A-TCF7L2 for
anchorage-independent growth using RNA interference-mediated
knockdown.
Publication Status: Online-Only
REFERENCE 4 (bases 1 to 4401)
AUTHORS Sotoodehnia,N., Isaacs,A., de Bakker,P.I., Dorr,M., Newton-Cheh,C.,
Nolte,I.M., van der Harst,P., Muller,M., Eijgelsheim,M., Alonso,A.,
Hicks,A.A., Padmanabhan,S., Hayward,C., Smith,A.V., Polasek,O.,
Giovannone,S., Fu,J., Magnani,J.W., Marciante,K.D., Pfeufer,A.,
Gharib,S.A., Teumer,A., Li,M., Bis,J.C., Rivadeneira,F.,
Aspelund,T., Kottgen,A., Johnson,T., Rice,K., Sie,M.P., Wang,Y.A.,
Klopp,N., Fuchsberger,C., Wild,S.H., Mateo Leach,I., Estrada,K.,
Volker,U., Wright,A.F., Asselbergs,F.W., Qu,J., Chakravarti,A.,
Sinner,M.F., Kors,J.A., Petersmann,A., Harris,T.B., Soliman,E.Z.,
Munroe,P.B., Psaty,B.M., Oostra,B.A., Cupples,L.A., Perz,S., de
Boer,R.A., Uitterlinden,A.G., Volzke,H., Spector,T.D., Liu,F.Y.,
Boerwinkle,E., Dominiczak,A.F., Rotter,J.I., van Herpen,G.,
Levy,D., Wichmann,H.E., van Gilst,W.H., Witteman,J.C.,
Kroemer,H.K., Kao,W.H., Heckbert,S.R., Meitinger,T., Hofman,A.,
Campbell,H., Folsom,A.R., van Veldhuisen,D.J., Schwienbacher,C.,
O'Donnell,C.J., Volpato,C.B., Caulfield,M.J., Connell,J.M.,
Launer,L., Lu,X., Franke,L., Fehrmann,R.S., te Meerman,G.,
Groen,H.J., Weersma,R.K., van den Berg,L.H., Wijmenga,C.,
Ophoff,R.A., Navis,G., Rudan,I., Snieder,H., Wilson,J.F.,
Pramstaller,P.P., Siscovick,D.S., Wang,T.J., Gudnason,V., van
Duijn,C.M., Felix,S.B., Fishman,G.I., Jamshidi,Y., Stricker,B.H.,
Samani,N.J., Kaab,S. and Arking,D.E.
TITLE Common variants in 22 loci are associated with QRS duration and
cardiac ventricular conduction
JOURNAL Nat. Genet. 42 (12), 1068-1076 (2010)
PUBMED 21076409
REFERENCE 5 (bases 1 to 4401)
AUTHORS Nishimoto-Morita,K., Shin,H.W., Mitsuhashi,H., Kitamura,M.,
Zhang,Q., Johannes,L. and Nakayama,K.
TITLE Differential effects of depletion of ARL1 and ARFRP1 on membrane
trafficking between the trans-Golgi network and endosomes
JOURNAL J. Biol. Chem. 284 (16), 10583-10592 (2009)
PUBMED 19224922
REFERENCE 6 (bases 1 to 4401)
AUTHORS Shiffman,D., O'Meara,E.S., Bare,L.A., Rowland,C.M., Louie,J.Z.,
Arellano,A.R., Lumley,T., Rice,K., Iakoubova,O., Luke,M.M.,
Young,B.A., Malloy,M.J., Kane,J.P., Ellis,S.G., Tracy,R.P.,
Devlin,J.J. and Psaty,B.M.
TITLE Association of gene variants with incident myocardial infarction in
the Cardiovascular Health Study
JOURNAL Arterioscler. Thromb. Vasc. Biol. 28 (1), 173-179 (2008)
PUBMED 17975119
REMARK GeneRIF: Observational study of gene-disease association. (HuGE
Navigator)
REFERENCE 7 (bases 1 to 4401)
AUTHORS Grupe,A., Li,Y., Rowland,C., Nowotny,P., Hinrichs,A.L., Smemo,S.,
Kauwe,J.S., Maxwell,T.J., Cherny,S., Doil,L., Tacey,K., van
Luchene,R., Myers,A., Wavrant-De Vrieze,F., Kaleem,M.,
Hollingworth,P., Jehu,L., Foy,C., Archer,N., Hamilton,G.,
Holmans,P., Morris,C.M., Catanese,J., Sninsky,J., White,T.J.,
Powell,J., Hardy,J., O'Donovan,M., Lovestone,S., Jones,L.,
Morris,J.C., Thal,L., Owen,M., Williams,J. and Goate,A.
TITLE A scan of chromosome 10 identifies a novel locus showing strong
association with late-onset Alzheimer disease
JOURNAL Am. J. Hum. Genet. 78 (1), 78-88 (2006)
PUBMED 16385451
REMARK GeneRIF: Observational study of gene-disease association. (HuGE
Navigator)
REFERENCE 8 (bases 1 to 4401)
AUTHORS Tai,G., Lu,L., Wang,T.L., Tang,B.L., Goud,B., Johannes,L. and
Hong,W.
TITLE Participation of the syntaxin 5/Ykt6/GS28/GS15 SNARE complex in
transport from the early/recycling endosome to the trans-Golgi
network
JOURNAL Mol. Biol. Cell 15 (9), 4011-4022 (2004)
PUBMED 15215310
REFERENCE 9 (bases 1 to 4401)
AUTHORS Mallard,F., Tang,B.L., Galli,T., Tenza,D., Saint-Pol,A., Yue,X.,
Antony,C., Hong,W., Goud,B. and Johannes,L.
TITLE Early/recycling endosomes-to-TGN transport involves two SNARE
complexes and a Rab6 isoform
JOURNAL J. Cell Biol. 156 (4), 653-664 (2002)
PUBMED 11839770
REFERENCE 10 (bases 1 to 4401)
AUTHORS Fischer von Mollard,G. and Stevens,T.H.
TITLE A human homolog can functionally replace the yeast
vesicle-associated SNARE Vti1p in two vesicle transport pathways
JOURNAL J. Biol. Chem. 273 (5), 2624-2630 (1998)
PUBMED 9446565
COMMENT VALIDATED REFSEQ: This record has undergone validation or
preliminary review. The reference sequence was derived from
DA472521.1, BC017052.1, BI909044.1, AI610960.1, AL158212.15 and
AI797732.1.
On Aug 29, 2006 this sequence version replaced gi:21624647.
Publication Note: This RefSeq record includes a subset of the
publications that are available for this gene. Please see the Gene
record to access additional publications.
##Evidence-Data-START##
Transcript exon combination :: AK303646.1, BI909044.1 [ECO:0000332]
RNAseq introns :: single sample supports all introns
ERS025081, ERS025082 [ECO:0000348]
##Evidence-Data-END##
PRIMARY REFSEQ_SPAN PRIMARY_IDENTIFIER PRIMARY_SPAN COMP
1-313 DA472521.1 2-314
314-803 BC017052.1 54-543
804-847 BI909044.1 572-615
848-1084 AI610960.1 144-380
1085-3983 AL158212.15 6476-9374
3984-4401 AI797732.1 1-418 c
FEATURES Location/Qualifiers
source 1..4401
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/chromosome="10"
/map="10q25.2"
gene 1..4401
/gene="VTI1A"
/gene_synonym="MVti1; Vti1-rp2; VTI1RP2"
/note="vesicle transport through interaction with t-SNAREs
1A"
/db_xref="GeneID:143187"
/db_xref="HGNC:17792"
/db_xref="MIM:614316"
exon 1..470
/gene="VTI1A"
/gene_synonym="MVti1; Vti1-rp2; VTI1RP2"
/inference="alignment:Splign:1.39.8"
variation 47
/gene="VTI1A"
/gene_synonym="MVti1; Vti1-rp2; VTI1RP2"
/replace="a"
/replace="g"
/db_xref="dbSNP:77198664"
variation 82
/gene="VTI1A"
/gene_synonym="MVti1; Vti1-rp2; VTI1RP2"
/replace="c"
/replace="t"
/db_xref="dbSNP:2277206"
variation 82
/gene="VTI1A"
/gene_synonym="MVti1; Vti1-rp2; VTI1RP2"
/replace=""
/replace="t"
/db_xref="dbSNP:367881529"
variation 178
/gene="VTI1A"
/gene_synonym="MVti1; Vti1-rp2; VTI1RP2"
/replace="c"
/replace="g"
/db_xref="dbSNP:112946836"
variation 247
/gene="VTI1A"
/gene_synonym="MVti1; Vti1-rp2; VTI1RP2"
/replace="a"
/replace="c"
/db_xref="dbSNP:189698865"
misc_feature 341..343
/gene="VTI1A"
/gene_synonym="MVti1; Vti1-rp2; VTI1RP2"
/note="upstream in-frame stop codon"
variation 343
/gene="VTI1A"
/gene_synonym="MVti1; Vti1-rp2; VTI1RP2"
/replace="a"
/replace="g"
/db_xref="dbSNP:370034836"
CDS 377..1030
/gene="VTI1A"
/gene_synonym="MVti1; Vti1-rp2; VTI1RP2"
/note="SNARE Vti1a-beta protein; vesicle transport v-SNARE
protein Vti1-like 2"
/codon_start=1
/product="vesicle transport through interaction with
t-SNAREs homolog 1A"
/protein_id="NP_660207.2"
/db_xref="GI:113374156"
/db_xref="CCDS:CCDS7575.2"
/db_xref="GeneID:143187"
/db_xref="HGNC:17792"
/db_xref="MIM:614316"
/translation="
MSSDFEGYEQDFAVLTAEITSKIARVPRLPPDEKKQMVANVEKQLEEAKELLEQMDLEVREIPPQSRGMYSNRMRSYKQEMGKLETDFKRSRIAYSDEVRNELLGDDGNSSENQRAHLLDNTERLERSSRRLEAGYQIAVETEQIGQEMLENLSHDREKIQRARERLRETDANLGKSSRILTGMLRRIIQNRILLVILGIIVVITILMAITFSVRRH
"
misc_feature 410..646
/gene="VTI1A"
/gene_synonym="MVti1; Vti1-rp2; VTI1RP2"
/note="Vesicle transport v-SNARE protein N-terminus;
Region: V-SNARE; pfam05008"
/db_xref="CDD:203149"
misc_feature 779..940
/gene="VTI1A"
/gene_synonym="MVti1; Vti1-rp2; VTI1RP2"
/note="Snare region anchored in the vesicle membrane
C-terminus; Region: V-SNARE_C; pfam12352"
/db_xref="CDD:152787"
misc_feature 953..1015
/gene="VTI1A"
/gene_synonym="MVti1; Vti1-rp2; VTI1RP2"
/inference="non-experimental evidence, no additional
details recorded"
/note="propagated from UniProtKB/Swiss-Prot (Q96AJ9.2);
transmembrane region"
variation 391
/gene="VTI1A"
/gene_synonym="MVti1; Vti1-rp2; VTI1RP2"
/replace="c"
/replace="g"
/db_xref="dbSNP:373573273"
variation 421
/gene="VTI1A"
/gene_synonym="MVti1; Vti1-rp2; VTI1RP2"
/replace="c"
/replace="t"
/db_xref="dbSNP:375200897"
variation 433
/gene="VTI1A"
/gene_synonym="MVti1; Vti1-rp2; VTI1RP2"
/replace="c"
/replace="t"
/db_xref="dbSNP:200608224"
variation 451
/gene="VTI1A"
/gene_synonym="MVti1; Vti1-rp2; VTI1RP2"
/replace="g"
/replace="t"
/db_xref="dbSNP:370389836"
exon 471..529
/gene="VTI1A"
/gene_synonym="MVti1; Vti1-rp2; VTI1RP2"
/inference="alignment:Splign:1.39.8"
variation 494
/gene="VTI1A"
/gene_synonym="MVti1; Vti1-rp2; VTI1RP2"
/replace="a"
/replace="g"
/db_xref="dbSNP:200105494"
variation 519
/gene="VTI1A"
/gene_synonym="MVti1; Vti1-rp2; VTI1RP2"
/replace="c"
/replace="t"
/db_xref="dbSNP:148767341"
variation 520
/gene="VTI1A"
/gene_synonym="MVti1; Vti1-rp2; VTI1RP2"
/replace="a"
/replace="g"
/db_xref="dbSNP:201100936"
exon 530..640
/gene="VTI1A"
/gene_synonym="MVti1; Vti1-rp2; VTI1RP2"
/inference="alignment:Splign:1.39.8"
variation 548
/gene="VTI1A"
/gene_synonym="MVti1; Vti1-rp2; VTI1RP2"
/replace="c"
/replace="g"
/db_xref="dbSNP:11815732"
variation 554
/gene="VTI1A"
/gene_synonym="MVti1; Vti1-rp2; VTI1RP2"
/replace="c"
/replace="t"
/db_xref="dbSNP:200445747"
variation 603
/gene="VTI1A"
/gene_synonym="MVti1; Vti1-rp2; VTI1RP2"
/replace="a"
/replace="g"
/db_xref="dbSNP:142137912"
variation 623
/gene="VTI1A"
/gene_synonym="MVti1; Vti1-rp2; VTI1RP2"
/replace="a"
/replace="g"
/db_xref="dbSNP:201970285"
variation 627
/gene="VTI1A"
/gene_synonym="MVti1; Vti1-rp2; VTI1RP2"
/replace="g"
/replace="t"
/db_xref="dbSNP:375510543"
variation 629
/gene="VTI1A"
/gene_synonym="MVti1; Vti1-rp2; VTI1RP2"
/replace="a"
/replace="g"
/db_xref="dbSNP:368328557"
exon 641..718
/gene="VTI1A"
/gene_synonym="MVti1; Vti1-rp2; VTI1RP2"
/inference="alignment:Splign:1.39.8"
variation 687
/gene="VTI1A"
/gene_synonym="MVti1; Vti1-rp2; VTI1RP2"
/replace="c"
/replace="t"
/db_xref="dbSNP:184549091"
variation 692
/gene="VTI1A"
/gene_synonym="MVti1; Vti1-rp2; VTI1RP2"
/replace="c"
/replace="g"
/db_xref="dbSNP:375060487"
exon 719..803
/gene="VTI1A"
/gene_synonym="MVti1; Vti1-rp2; VTI1RP2"
/inference="alignment:Splign:1.39.8"
variation 733
/gene="VTI1A"
/gene_synonym="MVti1; Vti1-rp2; VTI1RP2"
/replace="c"
/replace="g"
/db_xref="dbSNP:138856211"
variation 747
/gene="VTI1A"
/gene_synonym="MVti1; Vti1-rp2; VTI1RP2"
/replace="a"
/replace="g"
/db_xref="dbSNP:151163330"
variation 751
/gene="VTI1A"
/gene_synonym="MVti1; Vti1-rp2; VTI1RP2"
/replace="a"
/replace="g"
/db_xref="dbSNP:374470577"
variation 765
/gene="VTI1A"
/gene_synonym="MVti1; Vti1-rp2; VTI1RP2"
/replace="a"
/replace="g"
/db_xref="dbSNP:148949614"
variation 803
/gene="VTI1A"
/gene_synonym="MVti1; Vti1-rp2; VTI1RP2"
/replace="a"
/replace="g"
/db_xref="dbSNP:140252792"
exon 804..874
/gene="VTI1A"
/gene_synonym="MVti1; Vti1-rp2; VTI1RP2"
/inference="alignment:Splign:1.39.8"
variation 805
/gene="VTI1A"
/gene_synonym="MVti1; Vti1-rp2; VTI1RP2"
/replace="a"
/replace="g"
/db_xref="dbSNP:17353359"
variation 808
/gene="VTI1A"
/gene_synonym="MVti1; Vti1-rp2; VTI1RP2"
/replace="a"
/replace="g"
/db_xref="dbSNP:145533830"
variation 818
/gene="VTI1A"
/gene_synonym="MVti1; Vti1-rp2; VTI1RP2"
/replace="a"
/replace="g"
/db_xref="dbSNP:375862922"
variation 861
/gene="VTI1A"
/gene_synonym="MVti1; Vti1-rp2; VTI1RP2"
/replace="a"
/replace="g"
/db_xref="dbSNP:141117130"
exon 875..936
/gene="VTI1A"
/gene_synonym="MVti1; Vti1-rp2; VTI1RP2"
/inference="alignment:Splign:1.39.8"
variation 889
/gene="VTI1A"
/gene_synonym="MVti1; Vti1-rp2; VTI1RP2"
/replace="g"
/replace="t"
/db_xref="dbSNP:374215067"
variation 893
/gene="VTI1A"
/gene_synonym="MVti1; Vti1-rp2; VTI1RP2"
/replace="a"
/replace="g"
/db_xref="dbSNP:199652153"
variation 906
/gene="VTI1A"
/gene_synonym="MVti1; Vti1-rp2; VTI1RP2"
/replace="c"
/replace="g"
/db_xref="dbSNP:367733556"
variation 933
/gene="VTI1A"
/gene_synonym="MVti1; Vti1-rp2; VTI1RP2"
/replace="a"
/replace="g"
/db_xref="dbSNP:150156541"
exon 937..4391
/gene="VTI1A"
/gene_synonym="MVti1; Vti1-rp2; VTI1RP2"
/inference="alignment:Splign:1.39.8"
variation 984
/gene="VTI1A"
/gene_synonym="MVti1; Vti1-rp2; VTI1RP2"
/replace="g"
/replace="t"
/db_xref="dbSNP:377156614"
variation 993
/gene="VTI1A"
/gene_synonym="MVti1; Vti1-rp2; VTI1RP2"
/replace="c"
/replace="t"
/db_xref="dbSNP:368311934"
variation 1015
/gene="VTI1A"
/gene_synonym="MVti1; Vti1-rp2; VTI1RP2"
/replace="c"
/replace="t"
/db_xref="dbSNP:372898100"
variation 1032
/gene="VTI1A"
/gene_synonym="MVti1; Vti1-rp2; VTI1RP2"
/replace="g"
/replace="t"
/db_xref="dbSNP:375910494"
variation 1066
/gene="VTI1A"
/gene_synonym="MVti1; Vti1-rp2; VTI1RP2"
/replace="a"
/replace="c"
/db_xref="dbSNP:370013434"
variation 1078
/gene="VTI1A"
/gene_synonym="MVti1; Vti1-rp2; VTI1RP2"
/replace="a"
/replace="g"
/db_xref="dbSNP:372541851"
variation 1143
/gene="VTI1A"
/gene_synonym="MVti1; Vti1-rp2; VTI1RP2"
/replace="a"
/replace="g"
/db_xref="dbSNP:200035690"
variation 1153
/gene="VTI1A"
/gene_synonym="MVti1; Vti1-rp2; VTI1RP2"
/replace="a"
/replace="c"
/db_xref="dbSNP:139500767"
variation 1173
/gene="VTI1A"
/gene_synonym="MVti1; Vti1-rp2; VTI1RP2"
/replace="a"
/replace="g"
/db_xref="dbSNP:373888053"
variation 1213
/gene="VTI1A"
/gene_synonym="MVti1; Vti1-rp2; VTI1RP2"
/replace="c"
/replace="g"
/db_xref="dbSNP:368994513"
variation 1348
/gene="VTI1A"
/gene_synonym="MVti1; Vti1-rp2; VTI1RP2"
/replace="a"
/replace="g"
/db_xref="dbSNP:188510068"
variation 1354
/gene="VTI1A"
/gene_synonym="MVti1; Vti1-rp2; VTI1RP2"
/replace="a"
/replace="g"
/db_xref="dbSNP:149267139"
variation 1414
/gene="VTI1A"
/gene_synonym="MVti1; Vti1-rp2; VTI1RP2"
/replace="c"
/replace="t"
/db_xref="dbSNP:62000977"
variation 1489
/gene="VTI1A"
/gene_synonym="MVti1; Vti1-rp2; VTI1RP2"
/replace="a"
/replace="g"
/db_xref="dbSNP:193218273"
variation 1511
/gene="VTI1A"
/gene_synonym="MVti1; Vti1-rp2; VTI1RP2"
/replace="c"
/replace="t"
/db_xref="dbSNP:35483743"
variation 1582
/gene="VTI1A"
/gene_synonym="MVti1; Vti1-rp2; VTI1RP2"
/replace="c"
/replace="t"
/db_xref="dbSNP:375862673"
variation 1632
/gene="VTI1A"
/gene_synonym="MVti1; Vti1-rp2; VTI1RP2"
/replace="a"
/replace="c"
/db_xref="dbSNP:148401743"
variation 1655
/gene="VTI1A"
/gene_synonym="MVti1; Vti1-rp2; VTI1RP2"
/replace="c"
/replace="t"
/db_xref="dbSNP:3740144"
variation 1662
/gene="VTI1A"
/gene_synonym="MVti1; Vti1-rp2; VTI1RP2"
/replace="a"
/replace="c"
/db_xref="dbSNP:478854"
variation 1833
/gene="VTI1A"
/gene_synonym="MVti1; Vti1-rp2; VTI1RP2"
/replace="c"
/replace="t"
/db_xref="dbSNP:185635528"
variation 1885
/gene="VTI1A"
/gene_synonym="MVti1; Vti1-rp2; VTI1RP2"
/replace="c"
/replace="g"
/db_xref="dbSNP:189262863"
variation 2024
/gene="VTI1A"
/gene_synonym="MVti1; Vti1-rp2; VTI1RP2"
/replace="c"
/replace="t"
/db_xref="dbSNP:116176150"
variation 2040
/gene="VTI1A"
/gene_synonym="MVti1; Vti1-rp2; VTI1RP2"
/replace="a"
/replace="g"
/db_xref="dbSNP:191307745"
variation 2084
/gene="VTI1A"
/gene_synonym="MVti1; Vti1-rp2; VTI1RP2"
/replace="a"
/replace="g"
/db_xref="dbSNP:370389558"
variation 2100
/gene="VTI1A"
/gene_synonym="MVti1; Vti1-rp2; VTI1RP2"
/replace="g"
/replace="t"
/db_xref="dbSNP:142733444"
STS 2211..2514
/gene="VTI1A"
/gene_synonym="MVti1; Vti1-rp2; VTI1RP2"
/standard_name="RH123356"
/db_xref="UniSTS:135732"
variation 2278
/gene="VTI1A"
/gene_synonym="MVti1; Vti1-rp2; VTI1RP2"
/replace="a"
/replace="g"
/db_xref="dbSNP:146503527"
variation 2288
/gene="VTI1A"
/gene_synonym="MVti1; Vti1-rp2; VTI1RP2"
/replace="a"
/replace="c"
/db_xref="dbSNP:113432571"
variation 2291
/gene="VTI1A"
/gene_synonym="MVti1; Vti1-rp2; VTI1RP2"
/replace="c"
/replace="t"
/db_xref="dbSNP:183754221"
variation 2313
/gene="VTI1A"
/gene_synonym="MVti1; Vti1-rp2; VTI1RP2"
/replace="a"
/replace="g"
/db_xref="dbSNP:370264141"
variation 2362
/gene="VTI1A"
/gene_synonym="MVti1; Vti1-rp2; VTI1RP2"
/replace="c"
/replace="g"
/db_xref="dbSNP:372638941"
variation 2432
/gene="VTI1A"
/gene_synonym="MVti1; Vti1-rp2; VTI1RP2"
/replace="a"
/replace="c"
/db_xref="dbSNP:375921635"
STS 2502..2658
/gene="VTI1A"
/gene_synonym="MVti1; Vti1-rp2; VTI1RP2"
/standard_name="RH103741"
/db_xref="UniSTS:98066"
variation 2504
/gene="VTI1A"
/gene_synonym="MVti1; Vti1-rp2; VTI1RP2"
/replace="c"
/replace="t"
/db_xref="dbSNP:188545475"
variation 2522
/gene="VTI1A"
/gene_synonym="MVti1; Vti1-rp2; VTI1RP2"
/replace="a"
/replace="c"
/db_xref="dbSNP:1047467"
variation 2587
/gene="VTI1A"
/gene_synonym="MVti1; Vti1-rp2; VTI1RP2"
/replace="c"
/replace="t"
/db_xref="dbSNP:181297304"
variation 2624
/gene="VTI1A"
/gene_synonym="MVti1; Vti1-rp2; VTI1RP2"
/replace="c"
/replace="t"
/db_xref="dbSNP:3740145"
variation 2641
/gene="VTI1A"
/gene_synonym="MVti1; Vti1-rp2; VTI1RP2"
/replace="c"
/replace="t"
/db_xref="dbSNP:1047468"
variation 2642
/gene="VTI1A"
/gene_synonym="MVti1; Vti1-rp2; VTI1RP2"
/replace="a"
/replace="c"
/replace="g"
/db_xref="dbSNP:74664068"
variation 2653
/gene="VTI1A"
/gene_synonym="MVti1; Vti1-rp2; VTI1RP2"
/replace="a"
/replace="g"
/db_xref="dbSNP:186913200"
variation 2656
/gene="VTI1A"
/gene_synonym="MVti1; Vti1-rp2; VTI1RP2"
/replace="a"
/replace="g"
/db_xref="dbSNP:190058060"
variation 2735
/gene="VTI1A"
/gene_synonym="MVti1; Vti1-rp2; VTI1RP2"
/replace="c"
/replace="t"
/db_xref="dbSNP:74156819"
variation 2748
/gene="VTI1A"
/gene_synonym="MVti1; Vti1-rp2; VTI1RP2"
/replace="a"
/replace="g"
/db_xref="dbSNP:117890743"
variation 2779
/gene="VTI1A"
/gene_synonym="MVti1; Vti1-rp2; VTI1RP2"
/replace="c"
/replace="g"
/db_xref="dbSNP:77143010"
variation 2811
/gene="VTI1A"
/gene_synonym="MVti1; Vti1-rp2; VTI1RP2"
/replace="a"
/replace="c"
/db_xref="dbSNP:7097504"
variation 2998
/gene="VTI1A"
/gene_synonym="MVti1; Vti1-rp2; VTI1RP2"
/replace="a"
/replace="g"
/db_xref="dbSNP:75930682"
variation 3027
/gene="VTI1A"
/gene_synonym="MVti1; Vti1-rp2; VTI1RP2"
/replace="a"
/replace="g"
/db_xref="dbSNP:182278361"
variation 3111
/gene="VTI1A"
/gene_synonym="MVti1; Vti1-rp2; VTI1RP2"
/replace="c"
/replace="t"
/db_xref="dbSNP:187194669"
variation 3145
/gene="VTI1A"
/gene_synonym="MVti1; Vti1-rp2; VTI1RP2"
/replace="a"
/replace="g"
/db_xref="dbSNP:189690298"
variation 3166
/gene="VTI1A"
/gene_synonym="MVti1; Vti1-rp2; VTI1RP2"
/replace="c"
/replace="t"
/db_xref="dbSNP:73354449"
variation 3177
/gene="VTI1A"
/gene_synonym="MVti1; Vti1-rp2; VTI1RP2"
/replace="c"
/replace="t"
/db_xref="dbSNP:370978599"
variation 3328
/gene="VTI1A"
/gene_synonym="MVti1; Vti1-rp2; VTI1RP2"
/replace="a"
/replace="g"
/db_xref="dbSNP:182262679"
STS 3340..3478
/gene="VTI1A"
/gene_synonym="MVti1; Vti1-rp2; VTI1RP2"
/standard_name="RH65359"
/db_xref="UniSTS:60396"
variation 3386
/gene="VTI1A"
/gene_synonym="MVti1; Vti1-rp2; VTI1RP2"
/replace="c"
/replace="g"
/db_xref="dbSNP:115323230"
variation 3423
/gene="VTI1A"
/gene_synonym="MVti1; Vti1-rp2; VTI1RP2"
/replace="c"
/replace="t"
/db_xref="dbSNP:114355437"
variation 3497
/gene="VTI1A"
/gene_synonym="MVti1; Vti1-rp2; VTI1RP2"
/replace="c"
/replace="g"
/db_xref="dbSNP:371611974"
variation 3504
/gene="VTI1A"
/gene_synonym="MVti1; Vti1-rp2; VTI1RP2"
/replace="a"
/replace="g"
/db_xref="dbSNP:185421803"
variation 3511
/gene="VTI1A"
/gene_synonym="MVti1; Vti1-rp2; VTI1RP2"
/replace="a"
/replace="g"
/db_xref="dbSNP:376646495"
variation 3687
/gene="VTI1A"
/gene_synonym="MVti1; Vti1-rp2; VTI1RP2"
/replace="c"
/replace="t"
/db_xref="dbSNP:190180721"
variation 3839
/gene="VTI1A"
/gene_synonym="MVti1; Vti1-rp2; VTI1RP2"
/replace="c"
/replace="t"
/db_xref="dbSNP:113841076"
variation 3854
/gene="VTI1A"
/gene_synonym="MVti1; Vti1-rp2; VTI1RP2"
/replace="a"
/replace="g"
/db_xref="dbSNP:140518003"
variation 3883
/gene="VTI1A"
/gene_synonym="MVti1; Vti1-rp2; VTI1RP2"
/replace="a"
/replace="g"
/db_xref="dbSNP:183061412"
variation 3941
/gene="VTI1A"
/gene_synonym="MVti1; Vti1-rp2; VTI1RP2"
/replace="a"
/replace="g"
/db_xref="dbSNP:188544692"
variation 4027
/gene="VTI1A"
/gene_synonym="MVti1; Vti1-rp2; VTI1RP2"
/replace="a"
/replace="t"
/db_xref="dbSNP:150423906"
variation 4031
/gene="VTI1A"
/gene_synonym="MVti1; Vti1-rp2; VTI1RP2"
/replace="c"
/replace="t"
/db_xref="dbSNP:145220772"
variation 4366
/gene="VTI1A"
/gene_synonym="MVti1; Vti1-rp2; VTI1RP2"
/replace="c"
/replace="t"
/db_xref="dbSNP:367900393"
variation 4368
/gene="VTI1A"
/gene_synonym="MVti1; Vti1-rp2; VTI1RP2"
/replace="c"
/replace="t"
/db_xref="dbSNP:372099418"
ORIGIN
tgtgccttgtagcgtgtggatccggagccgattcccagaacacgaaggggggaaaaaacgcttctaatgatccctcagaacttgcatattttcatacgcttttctggggggaggcactaattggggcgcttttcctttgcgaacttacttatcttaaagtcggagcggaaaataaagcacgcacgcaacccaatttccggagaaccgagattgcgacgaacaaccaggaagcggctgggttgagagctgtccccggttctccgttctgctctcgggggcaccttccggggttcctaagccgcggggcccctcgctgcccctcgaggccctttccctgacctaggctttggcctgggctactcgttccggagccgccatgtcgtccgacttcgaaggttacgagcaggacttcgcggtgctcactgcagagatcaccagcaagattgcgagggtcccacgactcccgcctgatgaaaagaaacagatggttgcaaatgtggagaaacagcttgaagaagcgaaagaactgcttgaacagatggatttggaagtccgagagataccaccccaaagtcgagggatgtacagcaacagaatgagaagctacaaacaagaaatgggaaaactcgaaacagattttaaaaggtcacggatcgcctacagtgacgaagtacggaatgagctcctgggggatgatgggaattcctcagagaaccagagggcacatctgctcgataacacagagaggctggaaaggtcatctcggagactagaggctggataccaaatagcagtggaaaccgagcaaattggtcaggagatgttggaaaaccttagtcatgacagagaaaagatacagcgagcacgtgaaagacttcgggaaacagatgctaatttgggaaaaagctccaggattctgacagggatgttgcgaagaatcatccagaaccgcatcctgctcgtcatcctagggatcatcgtggtcatcaccatcctgatggcgatcactttttctgtcagaagacactgatgtatctgctctcccttgataaacagcaacaacagcttgttctgagtaattaagacaaaatggtcacatgaatcattctgttgcgctgacaggccccaggtgaccctctctctccctcaccgccgttgggctgaagtgcaaagagtgtaaaaatattttctattcctgtttgcatgtgggttggtttccttttcgaggtttgtcttcacccagattcgttttttagaggggaaggtgaatgtttatttacctttttgctaatgtcatcaactagccaaaatagccccagtgacactcctagccctctggacgtgtcaagggccgtggtttgggagaggacatgatgagtcagtcacgagagcttctgtttgtcacccgcctcttgttgctgaaaagctcttctgtgatgtctgaggataaaaatgcagcaaaaagcaggggatggagtcagtgaccccgtccagcaagccagccctgttcctacacaggcctcatgaatatagtcatcaacctgcctgagtgctttcattgtaaaggtcggtatttaatgtcggttgtacaggaaattgacttagcactttccctgtttttctattgcataattttttttttaacccaaagatattttttttgctgagcctgcccagtattcactgttcacaactttgattactggctacaagaaatattttcttgccttccccaaatcccatactccccagaatctgctggcaaagtgagccctggtacaggatttaattgtgacctcgtcttccctgacctgtgtaagcatctctgtatcctttcggttttaatatctgcactgccaaaagcagtcctcatacttgcaaaaggtctgacaaggttctctccacatacattccagtatgtaaagagaccatgaatatttcagtaagagcaagaacatgactccatcagtgtgaaatttcaaatgtgattataaatatgggagagtcctataggagggtccaccagagataaacttcacggaaaacgttccctaacctcctttaaaagaatagaggatggcagattgttccaaaaggaatggcttgggtttttaactaacaaatgttagcaagcctttcttgaattcactatgtattcaaacttctaatatgctttgtgatttttttctttcatttctttctgtctgaggtaaccaggaattgcgttcaaaatgagctcatttgtgatcaggcttaaaagttgcccaagctgaggtcgtttccccccagtcacaaagcagaatgtttttctcaagacttcataggcacttactggtccgtactatctttggaatataattagaagctttgaatccttgaaaagcaaacctgttctcttcatcaaaaatgctaaccacctgtgcccgtggatcaatatcacctggatgtagtgcttgatatttttcccaactcagaagaaaaccattatggtttagagaggaaatgcagaatggcagaatccaccagagaaattgcacttatcgaaacaggccaaggcctgcatgtgttcggataaatcatttagtattgtgtaaataaagctgcagcctttacttcggagggatggtgtgggattttggccgagggaagcaggacagagaaggagcaggaagctatgctaattttcctgtcagcttaagggatccgtctcagcaagaatcttgtattctgataacggaatgctgtacgtgctgaccacatctaagaaccattaaaaagcaaggaaacaaacaaacaacccttttctcattccgacacacgaatagtcatcgagtattacaccagcccctctggtggcttccttcaaaactgttgatcttagctaaagtgtataaccagttaccagctgcacttcgcacggccatcccgtccacaatgcagcagactcttcccaaggccacctagcaagcaaggttgatcggatcatctaaactggccgcctcctgaatatttcactgaatcctggcgttcatgttgaagcagacaaaatgagaaaggaggagggcattgctcacctctcaatagcttttttcgttcaagttctatgtctttatcagctcttgcctgtgattttaccccaattcaaccttgggagtgggaagaatatgaacagataacccttggcctaacagctccatcaaacctccttgagagcaactacctaggccaggctagtgagtgctttgtgaggaagctggtcagaaggttccctcaactccttcctggtcctcctggacactgcagaaaagacttaggggatccccagcagaggccaattgctctccttccttccctgccccaccaggaaaggaataacgtccacagacttgaagcagatagtgaagtagatctgtgagaggttctaggtacttagtgtgtagactttgacgaatatttctcaagttgggagcccttgttaaaaatgatgtttaagggagtggttggggggaagatgaaggcatggaggaggaagaagagaaggaagcccttgccatataaaattcatgcagactaaacagtttccctgacagaataaataaagtggatgctaccccactccagaatcaaaagcaatttaattaaagtctcttaagttgtaaagagttttaaatgatccgtgttgaaggcgaatgcctgcaaatgcagtgggtctgacgtcagctgccgggcctgggctgggaggccatttgctattctgtttaaggcaggctggattgtcttattttggaaccagcttggtggggggtttgctttgctactgcttctgagccctgagcttcaaaggctgaaattaatggtgaacaaaattgtgcggctctggccatcccatgcggggcaagcccattgagggttatcattaagtaaagaaataaagagggggaaaaaagcctgcctgttccaaaaacctcatcagataatgacctcagtgattgggttttcattaccaaacagcatccagagattatcaacccatagaagaagggaggggaaaaaaaagaaagaaaggaaaagcaactgtctttctctccctctctttctcctttttttttgcacatcttttctttaaaactgtcagatcatttcagtatttcaaatccgaggaaaacagcctgcctgctgctgtatttgaagttgtaatggtgtcaaaaagtcacgactgactgacagccgtcagtcccagaggggctcattaaatcataaaaacttgacaaggaaataattgcgcattgccagcaacttggcgcctgtttagacgtttttattttctttcattattagtccccaccattacgttcattaacaaattgcattaaacaactgttaagggctaaaaaaaaaaaa
//
ANNOTATIONS from NCBI Entrez Gene (20130726):
GeneID:143187 -> Molecular function: GO:0005484 [SNAP receptor activity] evidence: IDA
GeneID:143187 -> Biological process: GO:0006886 [intracellular protein transport] evidence: IEA
GeneID:143187 -> Biological process: GO:0042147 [retrograde transport, endosome to Golgi] evidence: IDA
GeneID:143187 -> Biological process: GO:0042147 [retrograde transport, endosome to Golgi] evidence: IMP
GeneID:143187 -> Cellular component: GO:0000139 [Golgi membrane] evidence: IEA
GeneID:143187 -> Cellular component: GO:0005794 [Golgi apparatus] evidence: IDA
GeneID:143187 -> Cellular component: GO:0016021 [integral to membrane] evidence: IEA
GeneID:143187 -> Cellular component: GO:0016023 [cytoplasmic membrane-bounded vesicle] evidence: IEA
GeneID:143187 -> Cellular component: GO:0031201 [SNARE complex] evidence: TAS
by
@meso_cacase at
DBCLS
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