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2025-04-24 04:00:09, GGRNA : RefSeq release 229 (Mar, 2025)

Summary:

Results:

Matches are highlighted with green background. Overlapping matches are dark colored.

Schizosaccharomyces pombe NRDE-2 family protein (nrl1), mRNA. (3139 bp)
misc_feature 645..1574 /gene="nrl1" /locus_tag="SPOM_SPBC20F10.05" /note="necessary for RNA interference; Region: NRDE-2; pfam08424" /db_xref="CDD:462472" ORIGIN // REFERENCE 1 (bases 1 to 3139) AUTHORS Schafer,B., Hansen,M. and Lang,B.F. TITLE Transcription and RNA-processing in fission yeast mitochondria JOURNAL RNA 11 (5), 785-795 (2005) PUBMED 15811919 REFERENCE 2 (bases 1 to 3139) AUTHORS Wood,V., Gwilliam,R., Rajandream,M.A., Lyne,M., Lyne,R., Stewart,A., Sgouros,J., Peat,N., Hayles,J., Baker,S., Basham,D., Bowman,S., Brooks,K., Brown,D., Brown,S., Chillingworth,T., Churcher,C., Collins,...
NM_001022290.3 - Schizosaccharomyces pombe (fission yeast) - NCBI - PomBase
Schizosaccharomyces pombe argonaute (ago1), mRNA. (2621 bp)
ArgoL1; pfam08699" /db_xref="CDD:462567" misc_feature 686..1033 /gene="ago1" /locus_tag="SPOM_SPCC736.11" /gene_synonym="csp9" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and Zwille; Region: PAZ_argonaute_like; cd02846" /db_xref="CDD:239212" misc_feature order(839..841,884..886,923..925,935..937,989..991, 1001..1003,1007..1009) /gene="ago1" /locus_tag="SPOM_SPCC736.11" /gene_synonym="csp9" /...
Synonym: csp9
NM_001022775.3 - Schizosaccharomyces pombe (fission yeast) - NCBI - PomBase

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Debug Info:

Redirect URI : https://ggrna.dbcls.jp/sp/%22RNA+interference%22
lang : en | div : | spe : sp | query_string : "RNA interference" | format : html | download : 

0.000 | 0.000 | search_start;
0.079 | 0.079 | count_done; http://172.18.8.71:7700/v1/refseq/query?q=((full_search:*:RNA+interference)%7C(nt:RNA+interference)%7C(aa:RNA+interference))?source=Schizosaccharomyces pombe (fission yeast)?to=0&format=json
0.094 | 0.015 | search_done; http://172.18.8.71:7700/v1/refseq/query?q=((full_search:*:RNA+interference)%7C(nt:RNA+interference)%7C(aa:RNA+interference))?source=Schizosaccharomyces pombe (fission yeast)?to=49?from=0?snippet=full_search?drilldown=source?get=accession,version,gi,length,symbol,synonym,geneid,division,source,definition&format=json
0.094 | 0.000 | cgi_end;

GGRNA ver.2 by @meso_cacase at DBCLS
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If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596. [Full Text]