2025-04-15 14:20:31, GGRNA.v2 : RefSeq release 229 (Mar, 2025)
LOCUS NM_001179648 1305 bp mRNA linear PLN 17-DEC-2024 DEFINITION Saccharomyces cerevisiae S288C ribosome biosynthesis protein RRP14 (RRP14), partial mRNA. ACCESSION NM_001179648 VERSION NM_001179648.1 DBLINK BioProject: PRJNA128 KEYWORDS RefSeq. SOURCE Saccharomyces cerevisiae S288C ORGANISM Saccharomyces cerevisiae S288C Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces. REFERENCE 1 (bases 1 to 1305) AUTHORS Engel,S.R., Wong,E.D., Nash,R.S., Aleksander,S., Alexander,M., Douglass,E., Karra,K., Miyasato,S.R., Simison,M., Skrzypek,M.S., Weng,S. and Cherry,J.M. TITLE New data and collaborations at the Saccharomyces Genome Database: updated reference genome, alleles, and the Alliance of Genome Resources JOURNAL Genetics 220 (4) (2022) PUBMED 34897464 REFERENCE 2 (bases 1 to 1305) AUTHORS Goffeau,A., Barrell,B.G., Bussey,H., Davis,R.W., Dujon,B., Feldmann,H., Galibert,F., Hoheisel,J.D., Jacq,C., Johnston,M., Louis,E.J., Mewes,H.W., Murakami,Y., Philippsen,P., Tettelin,H. and Oliver,S.G. TITLE Life with 6000 genes JOURNAL Science 274 (5287), 546 (1996) PUBMED 8849441 REFERENCE 3 (bases 1 to 1305) AUTHORS Dujon,B., Alexandraki,D., Andre,B., Ansorge,W., Baladron,V., Ballesta,J.P., Banrevi,A., Bolle,P.A., Bolotin-Fukuhara,M., Bossier,P. et al. TITLE Complete DNA sequence of yeast chromosome XI JOURNAL Nature 369 (6479), 371-378 (1994) PUBMED 8196765 REFERENCE 4 (bases 1 to 1305) CONSRTM NCBI Genome Project TITLE Direct Submission JOURNAL Submitted (17-DEC-2024) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA REFERENCE 5 (bases 1 to 1305) CONSRTM Saccharomyces Genome Database TITLE Direct Submission JOURNAL Submitted (04-MAY-2012) Department of Genetics, Stanford University, Stanford, CA 94305-5120, USA REMARK Protein update by submitter REFERENCE 6 (bases 1 to 1305) CONSRTM Saccharomyces Genome Database TITLE Direct Submission JOURNAL Submitted (31-MAR-2011) Department of Genetics, Stanford University, Stanford, CA 94305-5120, USA REMARK Sequence update by submitter REFERENCE 7 (bases 1 to 1305) CONSRTM Saccharomyces Genome Database TITLE Direct Submission JOURNAL Submitted (14-DEC-2009) Department of Genetics, Stanford University, Stanford, CA 94305-5120, USA COMMENT REVIEWED REFSEQ: This record has been curated by SGD. This record is derived from an annotated genomic sequence (NC_001143). ##Genome-Annotation-Data-START## Annotation Provider :: SGD Annotation Status :: Full Annotation Annotation Version :: R64-4-1 URL :: http://www.yeastgenome.org/ ##Genome-Annotation-Data-END## COMPLETENESS: incomplete on both ends. FEATURES Location/Qualifiers source 1..1305 /organism="Saccharomyces cerevisiae S288C" /mol_type="mRNA" /strain="S288C" /db_xref="taxon:559292" /chromosome="XI" gene <1..>1305 /gene="RRP14" /locus_tag="YKL082C" /db_xref="GeneID:853780" CDS 1..1305 /gene="RRP14" /locus_tag="YKL082C" /experiment="EXISTENCE:direct assay:GO:0005730 nucleolus [PMID:17804645|PMID:11489916]" /experiment="EXISTENCE:mutant phenotype:GO:0042273 ribosomal large subunit biogenesis [PMID:17804645|PMID:17272295]" /experiment="EXISTENCE:mutant phenotype:GO:0042274 ribosomal small subunit biogenesis [PMID:17272295]" /note="Essential protein, constituent of 66S pre-ribosomal particles; interacts with proteins involved in ribosomal biogenesis and cell polarity; member of the SURF-6 family" /codon_start=1 /product="ribosome biosynthesis protein RRP14" /protein_id="NP_012841.1" /db_xref="GeneID:853780" /db_xref="SGD:S000001565" /translation="
MSNSLEERLRANSSAFDGLLALIPAKYYYDEKSQEQWKAKKKTKEQSKNDKLKKLDPEQRDDETSSTLEVMKKKEKDAKPVVLPGEKFKHMKMQKQKEATSKVEGDSDLNVEVNDPMIIAPDEDEEEEEDIKVIFDDEGNEIPLESKKDTTEPDRSVEKKSITEEEKLQRKKNLEALRSKLQAKISDMKSKRKAPGSREAILAQRKRKEELKKRKRLESEQEQDQDEIASDSDMEDIDSDLENNSKKRFKKGKKDSEINADGVMFQNIIFDDGARATSDLQRLRKAGRTKGPAKNDVKSHLKLLEAKKNKMEAKDELEQIKQKEKEKWQKAMLQAEGIKIRDDEKLLRKAIKRKEAQKRKSAIEWSERKRVVEDTISERQKRREENLRIRKDNKGKKRNKQEKMKRKYVGSAVPKKRAGFEGRLKTGKKKGGPK"
misc_feature 22..174 /gene="RRP14" /locus_tag="YKL082C" /note="60S ribosome biogenesis protein Rrp14; Region: RRP14; pfam15459" /db_xref="CDD:464729" misc_feature 661..1200 /gene="RRP14" /locus_tag="YKL082C" /note="Surfeit locus protein 6; Region: SURF6; pfam04935" /db_xref="CDD:461491" ORIGIN
atgagtaattcacttgaggagcgccttcgtgctaattcaagcgccttcgatggtttattggctttaattcctgcaaaatactattatgatgaaaaaagtcaagagcaatggaaggccaagaagaaaaccaaagaacagagtaaaaatgataaactgaaaaaattagacccggagcaacgtgatgatgaaacatctagtacattagaagtaatgaagaagaaggagaaagacgcaaagccggtggtcctacctggtgaaaaattcaagcacatgaaaatgcaaaagcaaaaggaagcaacatcaaaagtggaaggagactccgacctgaacgtagaagtaaacgatcctatgataatagcaccagacgaagatgaagaagaggaagaggatattaaggtgatctttgatgatgagggaaatgaaataccattagaatctaaaaaagatactacagagcccgatagatctgtcgaaaagaagtctattacagaggaagagaaactacaaagaaagaaaaacttggaagcactacgttccaagttacaagcgaaaatttcagatatgaagagtaaaaggaaagcacccggttctagagaggctattcttgctcaaaggaaacgcaaggaagagttgaaaaaaagaaagcgtctagaaagtgaacaggaacaggatcaggatgaaattgcgtctgattccgatatggaagacatcgatagtgatttagaaaacaattcgaaaaaaagattcaaaaaaggcaagaaggactcagaaattaacgcagatggtgtaatgtttcaaaatatcatattcgatgatggtgcaagggccacttcagatttacaaaggttaagaaaagctggtagaacgaagggtccggctaagaatgatgtaaaatcacacttaaagttattagaagccaagaagaataagatggaggcgaaagacgaactagaacaaatcaagcagaaggaaaaggaaaaatggcaaaaggctatgttacaagcagaaggaattaagattagggatgacgaaaaactacttcgcaaagctataaagagaaaggaagcacaaaagagaaagtctgcgattgaatggagcgaacgtaagagggttgtggaagacacgatatctgaaagacaaaagagaagagaagagaatctgaggattaggaaagacaacaagggtaaaaagagaaataagcaagaaaagatgaaaagaaagtatgtcggtagtgccgtaccaaagaaaagagccggatttgagggtagattaaaaacaggtaaaaagaagggaggacctaaataa
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Creative Commons Attribution 4.0 International License (CC BY 4.0).
If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596.
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