2024-11-25 01:17:03, GGRNA.v2 : RefSeq release 226 (Sep, 2024)
LOCUS XM_039113362 9988 bp mRNA linear ROD 22-FEB-2024 DEFINITION PREDICTED: Rattus norvegicus dicer 1 ribonuclease III (Dicer1), transcript variant X3, mRNA. ACCESSION XM_039113362 VERSION XM_039113362.2 DBLINK BioProject: PRJNA1074393 KEYWORDS RefSeq. SOURCE Rattus norvegicus (Norway rat) ORGANISM Rattus norvegicus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_086024) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Feb 22, 2024 this sequence version replaced XM_039113362.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_036323735.1-RS_2024_02 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.2 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 02/09/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..9988 /organism="Rattus norvegicus" /mol_type="mRNA" /strain="BN/NHsdMcwi" /bio_material="RGD 61498" /db_xref="taxon:10116" /chromosome="6" /sex="male" /tissue_type="kidney, spleen, liver" /geo_loc_name="USA: Wisconsin, Milwaukee" /lat_lon="43.05 N 88.04 W" /collected_by="Rebecca Schilling, Melinda Dwinell" gene 1..9988 /gene="Dicer1" /note="dicer 1 ribonuclease III; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 9 ESTs, 167 long SRA reads, 5 Proteins" /db_xref="GeneID:299284" /db_xref="RGD:1309381" CDS 449..6115 /gene="Dicer1" /codon_start=1 /product="endoribonuclease Dicer isoform X2" /protein_id="XP_038969290.1" /db_xref="GeneID:299284" /db_xref="RGD:1309381" /translation="
MSECSSDSSNTALADIKTVELLEAALDHNTIVCLNTGSGKTFIAVLLTKELAHQIRGDLSPHAKRTVFLVNSANQVAQQVSAVRTHSDLKVGEYSNLEVNASWTKERWSQEFTKHQVLIMTCYVALNVLKNGYLSLSDINLLVFDECHLAILDHPYREIMKLCDSCPSCPRILGLTASILNGKCDPDELEEKIQKLEKILKSGAETATDLVVLDRYTSQPCEIVVDCGPFTDRSGLYERLLMELEEALDFINDCNVSVHSKERDSTLISKQILSDCRAVLVVLGPWCADKVAGMMVRELQKYIKHEQEELHRKFLLFTDTLLRKIHALCEEYFSPASLDLKYVTPKVMKLLEILRKYKPYERQQFESVEWYNNRNQDNYVSWSDSEDDDDDEEIEEKEKPETNFPSPFTNILCGIIFVERRYTAVVLNRLIKEAGKQDPELAYISSNFITGHGIGKNQPRSKQMEAEFRKQEEVLRKFRAHETNLLIATSVVEEGVDIPKCNLVVRFDLPTEYRSYVQSKGRARAPISNYVMLADTDKIKSFEEDLKTYKAIEKILRNKCSKSVDGAEADVHAVVDDDDVFPPYVLRPDDGGPRVTINTAIGHINRYCARLPSDPFTHLAPKCRTRELPDGTFYSTLYLPINSPLRASIVGPPMGCVRLAERVVALICCEKLHKIGELDEHLMPVGKETVKYEEELDLHDEEETSVPGRPGSTKRRQCYPKAIPECLRESYPKPDQPCYLYVIGMVLTTPLPDELNFRRRKLYPPEDTTRCFGILTAKPIPQIPHFPVYTRSGEVTISIELKKSGFTLSQQMLELVTRLHQYIFSHILRLEKPALEFQPAGAESAYCVLPLNVVNDSSTLDIDFKFMEDIEKSEARIGIPSTKYSKETPFVFKLEDYQDAVIIPRYRNFDQPHRFYVADVYTDLTPLSKFPSPEYETFAEYYKTKYNLDLTNLNQPLLDVDHTSSRLNLLTPRHLNQKGKALPLSSAEKRKAKWESLQNKQILVPELCAIHPIPASLWRKAVCLPSILYRLHCLLTAEELRAQTASDAGVGVRSLPADFRYPNLDFGWKKSIDSKSFISTCNSSLAESDNYCKHSTTVVPENAAHQGATRPSLENHDQMSVNCKRLPAESPAKLQSEVSVDLTAINGLSYNKSLANGSYDLVNRDFCQGNQLTYFKQEIPVQPTTSYPIQNLYNYENQPTPSNECPLLSNKYLDGNANTSTSDGSPAGSPRPAMMTAVEALEGRTDSEQSPSVGHSSRTLGPNPGLILQALTLSNASDGFNLERLEMLGDSFLKHAITTYLFCTYPDAHEGRLSYMRSKKVSNCNLYRLGKKQGLPSRMVVSIFDPPVNWLPPGYVVNQDKSNSEKWEKDEMTKDCLLANGKLGEDCEEEEEEELAWRAPKEEAEYEDDLLEYDQEHIQFIDSMLMGSGAFVKKIPLSPFSTSDSAYEWKMPKKASLGSVPFSSDLEDFDYSSWDAMCYLDPSKAVEEDDFVVGFWNPSEENCGVDTGKQSISYDLHTEQCIADKSIADCVEALLGCYLTSCGERAAQLFLCSLGLKVLPVIKRTSRDKASYPAQENSSSQQKSPSGSCAAAVSPRSSAGKDLEYGCLKIPPRCMFDHPDAEKTLNHLISGFENFEKKINYIFKNKAYLLQAFTHASYHYNTITDCYQRLEFLGDAILDYLITKHLYEDPRQHSPGVLTDLRSALVNNTIFASLAVKYDYHKYFKAVSPELFHVIDDFVQFQLEKNEMQGMDSELRRSEEDEEKEEDIEVPKAMGDIFESLAGAIYMDSGMSLEVVWQVYYPMMRPLIEKFSANVPRSPVRELLEMEPETAKFSPAERTYDGKVRVTVEVVGKGKFKGVGRSYRIAKSAAARRALRSLKANQPLVPNS"
misc_feature 503..1075 /gene="Dicer1" /note="DEXH-box helicase domain of endoribonuclease Dicer; Region: DEXHc_dicer; cd18034" /db_xref="CDD:350792" misc_feature order(659..664,731..736,809..811,815..820,827..829, 902..910) /gene="Dicer1" /note="nucleic acid binding site [nucleotide binding]; other site" /db_xref="CDD:350792" misc_feature 1169..1453 /gene="Dicer1" /note="Partner-binding domain of the endoribonuclease Dicer; Region: Dicer_PBD; cd15903" /db_xref="CDD:277191" misc_feature order(1184..1189,1196..1198,1202..1207,1382..1387, 1394..1399,1406..1408,1415..1420,1427..1429) /gene="Dicer1" /note="Trbp binding interface [polypeptide binding]; other site" /db_xref="CDD:277191" misc_feature 1472..2050 /gene="Dicer1" /note="C-terminal helicase domain of the endoribonuclease Dicer; Region: SF2_C_dicer; cd18802" /db_xref="CDD:350189" misc_feature order(1703..1711,1919..1921,1976..1978,1982..1984) /gene="Dicer1" /note="DNA binding site [nucleotide binding]" /db_xref="CDD:350189" misc_feature order(1931..1933,1937..1939,2012..2014,2018..2020) /gene="Dicer1" /note="ATP binding site [chemical binding]; other site" /db_xref="CDD:350189" misc_feature 2246..2512 /gene="Dicer1" /note="Dicer dimerization domain; Region: Dicer_dimer; pfam03368" /db_xref="CDD:460900" misc_feature 3014..3382 /gene="Dicer1" /note="PAZ domain, dicer_like subfamily. Dicer is an RNAse involved in cleaving dsRNA in the RNA interference pathway. It generates dsRNAs which are approximately 20 bp long (siRNAs), which in turn target hydrolysis of homologous RNAs. PAZ domains are named...; Region: PAZ_dicer_like; cd02843" /db_xref="CDD:239209" misc_feature order(3203..3205,3242..3244,3260..3262,3272..3274, 3326..3328,3350..3352,3356..3358) /gene="Dicer1" /note="nucleic acid-binding interface [nucleotide binding]; other site" /db_xref="CDD:239209" misc_feature 4244..>4519 /gene="Dicer1" /note="Ribonuclease III family; Region: RIBOc; smart00535" /db_xref="CDD:197778" misc_feature order(4295..4300,4307..4312,4319..4321,4328..4333, 4340..4345,4349..4357,4385..4387) /gene="Dicer1" /note="dimerization interface [polypeptide binding]; other site" /db_xref="CDD:238333" misc_feature 5390..5884 /gene="Dicer1" /note="Ribonuclease III C terminal domain. This group consists of eukaryotic, bacterial and archeal ribonuclease III (RNAse III) proteins. RNAse III is a double stranded RNA-specific endonuclease. Prokaryotic RNAse III is important in post-transcriptional...; Region: RIBOc; cd00593" /db_xref="CDD:238333" misc_feature order(5450..5455,5462..5467,5474..5476,5483..5488, 5495..5500,5504..5512,5540..5542,5804..5806,5837..5839) /gene="Dicer1" /note="dimerization interface [polypeptide binding]; other site" /db_xref="CDD:238333" misc_feature order(5450..5452,5459..5461,5471..5473,5774..5776, 5783..5785) /gene="Dicer1" /note="active site" /db_xref="CDD:238333" misc_feature order(5459..5461,5774..5776,5783..5785) /gene="Dicer1" /note="metal binding site [ion binding]; metal-binding site" /db_xref="CDD:238333" misc_feature 5897..6085 /gene="Dicer1" /note="double-stranded RNA binding motif of endoribonuclease Dicer and similar proteins; Region: DSRM_DICER; cd10843" /db_xref="CDD:380680" misc_feature order(5897..5902,5906..5911,5918..5923,5930..5935, 5945..5947,5960..5968,5972..5974,5978..5980,6029..6040, 6047..6049) /gene="Dicer1" /note="putative RNA binding site [nucleotide binding]; other site" /db_xref="CDD:380680" polyA_site 9988 /gene="Dicer1" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN
ggaggggtcgggacgcggcgcggtgcggtgcgggcggctccgggcccaggtgaatggagtaacctgacagcgggaacgaggcgacggcgagcggcaggaaatggcggcggcggcggcggcgccgggcggcaccgggaggcctgggctgtgacgcgcgcgccggagcggggtccgatggttctggaaggcccgcggcgcccagtgctgcagagatcgtgcttggagctctggaggaaaccttctgtagttagtgcactggaggctcaaggttccacacactgcagcaggagaagggaattctgaaacacaaaggaaaagggatttcttctgatttcaacaggttacctagggtatgcataaatacagacttggaaactgaaagaacttagagtcagcatttcgagagctgaagcttgggcatgctgtgattttccaataagctatcacaatgtcagaatgcagttcagacagcagcaacacagcgctcgcagacattaaaacggttgagctgctggaagcagctctggaccacaacaccattgtgtgcttgaacactggctcagggaagacgttcatcgccgtcctgctcaccaaagagctggcccaccagatcaggggcgacctcagtccgcatgcaaaaaggactgtgttcctcgtcaactctgcaaaccaggttgctcaacaagtgtcagctgtcagaactcactcagatctcaaggttggggagtactcaaacctcgaagtgaatgcatcttggacaaaagagagatggagccaagagtttactaagcaccaggttctcattatgacttgctatgtcgccttgaatgttttgaaaaatggttacttatcactgtcagacattaaccttttggtgtttgatgagtgtcatcttgcaattctagaccacccctatcgtgaaattatgaagctctgtgacagttgtccatcatgccctcgaattttgggactaactgcttccattttaaatgggaaatgtgacccagacgaattggaagaaaagattcagaaactggaaaagattctcaagagtggcgctgagaccgcaactgacctggtggtcctggacagatacacttctcagccttgtgagattgtggtggattgcggaccatttactgacagaagtgggctttatgaaagactgctgatggagttagaagaagcacttgactttatcaatgactgtaatgtatctgtacattcaaaggaaagagattctactttgatttccaaacaaatcctctcagactgccgtgcagtgctggtcgtcctgggaccctggtgtgcagataaagtagcggggatgatggtaagagaacttcagaagtacatcaaacatgagcaagaggagctacacaggaagttcttattgtttacagacactctgctaaggaaaatacatgcactgtgtgaagagtacttctcccctgcctcacttgacctgaagtatgtaactcccaaagtcatgaaactgctcgagatcctgcgcaaatacaagccctatgagcgacagcagttcgaaagtgttgagtggtacaataacaggaatcaggataattatgtgtcctggagtgattctgaggacgatgacgatgatgaagaaattgaagaaaaagaaaagccagagacaaattttccttctccatttaccaatattttatgtggaattatttttgtggaaagaagatacacagcagttgtcctaaacagattgataaaggaagctggcaaacaagatccagagctggcttatatcagcagcaactttataactgggcatggcattggaaagaaccagcctcgcagcaagcagatggaggcggagttcagaaagcaagaggaggtacttaggaaatttcgagcacatgagaccaacctgctcattgcaacaagtgttgtagaagagggtgtggacattcccaagtgcaatttggtggttcgttttgatttgcccacagagtatcgttcttacgttcagtctaaaggacgggcacgagcaccgatctctaattatgtaatgttagcagacacagacaaaataaagagctttgaagaagacctcaagacctacaaagctatagaaaagatcttaagaaacaagtgttcaaagtcagtggatggtgctgaggctgacgtccatgctgttgtagatgatgatgatgttttcccgccatatgtactgaggcctgatgatgggggtcctcgagtcacaatcaacactgccattggacacatcaacagatattgtgctcgattaccaagtgatccgtttacgcatctagctcccaaatgtagaacccgagaattgcctgatggtacattttattcaactctttatcttccgattaactcacctcttcgagcctccattgttggtccaccgatgggctgtgtacggctggctgagagagtggtagctctcatctgctgtgaaaaactgcacaaaattggtgaactggatgaacatttgatgccagttgggaaagagactgttaagtatgaagaagaacttgacttacatgatgaagaggagaccagcgttccagggagaccaggatccacaaaacgaaggcagtgctaccccaaagcaattccagagtgcttgagggagagttaccccaaacccgatcaaccctgttacctgtatgtgataggaatggtcttaaccaccccccttcctgatgagctcaacttcaggcggcggaagctctaccctcctgaggacaccaccagatgctttgggatcctgacagccaaacccatacctcagatccctcactttcctgtgtatactcgctctggagaggtcaccatatccatcgagctgaagaagtctggtttcacactgtctcaacaaatgcttgagctggttacgagactgcaccagtacatattctcacacattctccggctcgagaagcctgccctggagtttcaacccgcgggcgctgagtcagcgtactgtgttctacctcttaacgtcgttaatgactccagcactttggacattgactttaaattcatggaggatattgagaagtctgaagctcgtataggcattcccagcactaagtattcaaaggaaacaccgtttgtttttaagttagaagattaccaagatgcagttatcattccaagataccgcaattttgatcagcctcatcgattttatgtagctgatgtgtatactgatcttaccccactcagtaaatttccttcccctgaatatgaaacttttgcagaatattataaaacaaagtataaccttgacctgaccaatctcaaccagccactgctggatgttgaccacacatcttccagactgaaccttctaacccctcggcatttgaatcagaaggggaaagcacttcctctaagcagtgctgaaaagaggaaagccaaatgggaaagtctgcagaacaaacagatactggttccggaactctgtgctatacatccaatcccagcatcactgtggagaaaagcagtttgtctccccagcatactgtatcgccttcactgccttctgactgcggaggagctcagagctcagacagccagcgatgctggcgtaggagtcagatcacttccggccgattttagataccctaacttagacttcgggtggaaaaagtctattgatagcaagtctttcatctcaacctgtaactcctcgttggctgagagtgataattactgtaagcacagcacaactgtagtccctgaaaatgctgcacatcaaggtgctactagaccctccttagaaaaccatgaccaaatgtctgtgaactgcaaaaggttgcccgccgagtcacctgctaagctccaaagtgaggtttcagtggatcttacagcaatcaatggtctttcttacaataaaagccttgccaatggcagttatgatttagttaacagagacttttgccaaggaaatcagctgacttacttcaagcaggaaatacctgtacaaccaactacctcatatcccattcagaatttatacaattatgagaaccagcccacgcccagcaatgaatgtcctctactgagtaataagtaccttgatgggaacgctaacacatctacctcagacggaagccccgcagggtccccaaggcctgccatgatgactgctgttgaagcactggagggcaggacagactctgagcagagcccttctgtggggcactcctcaaggactctcggccccaacccaggactgattcttcaggctttgacactgtcgaacgctagcgatgggtttaacctagagcggcttgagatgcttggcgactccttcttaaagcacgctatcaccacgtatctgttttgcacataccctgatgctcatgagggccgcctttcatatatgagaagcaaaaaggtcagcaactgtaacctgtaccgccttggcaagaagcagggactgcccagccgcatggtggtgtcgatatttgatcctcctgtgaattggcttcctcctggttatgtggtaaaccaagacaaaagtaactcagagaaatgggaaaaggatgaaatgacaaaagactgcttgctggctaatggcaaactgggtgaggactgtgaggaggaggaggaggaggagctggcgtggagggctcccaaggaggaggctgagtatgaagacgacctcctggagtatgaccaggagcacattcagtttatagacagcatgctaatgggctcaggggcctttgtgaagaaaatccctctttcccccttttccacctctgattctgcatatgaatggaaaatgcccaaaaaggcctccctgggcagtgtgccgttttcctcagaccttgaggattttgattacagctcttgggatgcaatgtgctatctggatcctagcaaagccgttgaagaggatgactttgtggtaggtttctggaatccatcagaagaaaactgtggcgtggacacagggaagcagtccatttcttacgacttgcacactgagcagtgcatcgcggacaagagcatagcggactgcgtggaggccctgctgggctgttacttaaccagctgtggtgagagggctgctcagctcttcctctgctcgctggggctgaaggtgctcccagtcatcaaaaggaccagccgggacaaggcctcgtaccctgctcaggagaactcaagcagccaacagaagagcccttcagggagctgtgctgctgcagtcagtccccgctcctctgcagggaaagacttggagtatggctgcttgaagatcccgccaaggtgtatgtttgaccatccagatgcagagaaaaccctgaaccacctcatatctgggtttgaaaattttgaaaagaaaatcaactacatattcaagaataaggcttaccttctgcaggcttttacacatgcctcctaccactacaacactattactgattgttaccagcgcttagaattcctgggagatgcgattttggactacctcataaccaagcacctttatgaagacccacggcagcattctccaggggtcctgactgacctgcgctctgccctggtcaataacaccatctttgcgtcgctggctgtgaagtatgactaccacaagtactttaaagccgtctctcctgagctcttccacgtcattgatgacttcgtgcagtttcagctggagaagaacgagatgcaaggaatggactctgagcttaggagatccgaggaggatgaggagaaagaagaggatattgaagtccccaaggccatgggagacatttttgagtctcttgctggtgccatttatatggacagtgggatgtccctggaggtggtctggcaggtgtactatccgatgatgcggcctctaatagaaaagttttctgcaaatgtgcctcgttctccggtaagagaattgcttgagatggaaccagaaactgccaagtttagcccagcggagagaacttacgatgggaaggtcagagtcaccgtggaagtggtgggaaaggggaagtttaaaggtgtcggccggagctacaggatcgcaaagtctgctgcagcacgaagagccctccgcagcctcaaagctaaccagcctctggttcctaacagctgaagcttccagactcacaggcggcaaggcagtgaccagaaccatagcagcacaccacaaaggatgactcaagccgacacagagcagaaagattgacggcagaacttaaagtttgataatgagatagataacagaataaaacctttaatatgtgtataaactctttggaactaattgtagctttagtttttgcgcagacacaatcttgtcttctttatccaccctgctttgtttagtcacaggagcgctttgatgctggtgtttattggcgagtttttaaatcactttgacaggtttctgggtttttatttgtttgtttttgttttcacatttcatttctgttgacttgacttggcttggtgttagagatcatggagcttaaccctctgacagtccctagagctcgggggtcctgaccctgcggttcctccacaccagtgcctgtttgctgcagttgtcaagcccagcaaagcagaacagtttgcaaaggaagctctggtgttgtggagggcagtggaggaaggggcggggcagccccctgtcgctgtggcacatagtagtaagggacagacttggagtcagtgttggccatcgatgagtcgaggccaggttttcagaggtcacgtagtgctgcagagggctcttgccttaaaagtacgggcctgatagtttgctttcttatcttgccttcccgggttatgcattggatgagatgggtggcagctcaccagagcacctgcaccagaattactgcagtaggatttctgttgcgtgtcctgaaaacattcgaaaacccggcgtgagtagatggagttttaaagcaccattatagacaggatatgtggctagatgcccagttttcctcagaactttctgccaggggtcccagtggtggaagtgcttgcccagtcgaccattgttcattgacaaaatgagcctgagatgcagtccgcctagatagacatgccgcaggtttgtactggagcacgtcctggcagtgttgccagagtcacccatgctgggccgtcagtctcatggggtcagcattgaggcagactgccaggactgactcgtctggggtggaagtcgtgagtttagataaactaggtccttagttcatctcagaatcagagaaactaaagctgtttaggcatttgctgaagcgcctggaccgggcttgtgggccctcttcacttacacacctcagtcccctccctttgcgtgcattttcccgttggtgctatgtttatgtatcatgcttgaagtttaattttttgcactgtgactataatacctcttaatttacattttaaaatgctatatgggttgctcatgccctcccaccgacatacaggagagttttgctgcatttagccctattacgcttgaagtttcagcacgctgagccagggtggctcgtgcttcccacacgtcttctgaggctgatgcttcatgcaatgctgcacttaggttccagtcacctttggcttcactgcaccatccgctcgagagagacgccgtgtgcgctgagcactcgggctgtcaggtaccccacgtgaagggggggagagtgagcttctccaaggattacgtaattgcccatctgaaaatcgggatctgaattagtgtttggtgaaatcaatttggctgactcatcttaaatatttaattctaacttgaaattgtagttgtctatttgatttagaacatccctctcccccatgcacacacacacacacacacacacacacacacacacacacacacacacccctacatacaaacacaccccccccacacacacacacacaaaccttaatgcaagacatcatagcatgtgcaaaccaggtgatcttttgaatgttgtagctataatttgtacagtgagatagtaaggtagggtgggattgtgggaggtggaatttgttgtcctattaccgtctcttggtaatttataaactacctgattctctgcattgtgatttgtgcatttatgtcctggggtgctctggcatcctggcaccaaaatcagactgttttacagttccattcctggtggaagaaaatgcctcaatatattttgtaaccataaggagagtatttttttgttaatattaaaaagatcagaattggatatgcttagatcatccattctcagggctcaaattttatgccactattcagaatgttgtatcagtagcaaacttgggctgtttttccttttatccccccgtacccgcctctttttggttgttgtttgataaaagtacctgaaaattaatttgacccacagtttgaatcatactgtgatttacccagagaccaagttggggaatcagaagtacgatgacgagttagacacacgcgaagatcaggaatgcatttgtgttggggagttgtccccaggctctcactggttgaaagactgcattttagagaaaagttgttctgttccctcccgtgatgacttcgtgtgcctcccctgccagtgtagcaggaggaggagaagccagccagcggctgtgaggacgaggtgggccgctgcacagatgctgtggctgtgcgtgagctcctggggtgctgcagtactgggacaccccctgtggccccttggcaatcccagccgtacagagggagggagggaggccctgtcttctgttgggttgtgtccatgaagcatgggctggccagtgttccagaggggaggcctgtggttctgacttgacaacatacggggatgcctacagcttgtcacacacttgcacactttagctattattattactttgtctgtggcattttcttctgtctgtaaagtgaaagcacggcagaaatgtgttgactgaacacttaattatgctttttaaatgttttggttacgtttcttttttcatttatattatatgaaatgattaaatttagaataacctctaacactcctataattatcatttaaaatactgatgtttttattgtctcgacagtagtccgtcctcagaacagtgcagacacactgtgtgattagcagggacttgaggctgttttggttctgccgttcagttcctgtgtacagtcgctcaccagcagccaccagacagtggctgcgagcgtggagaacagtcaaaaatccacaacctcccggtttgcttgtagggcctattgatttaaaactactccttgctcggtgaaggcacctagtcctcctgcacaaacgtaacgctggcaaacggaggccttgcacctttatttcacagcccctgagctgagccgccagccgcatccttagccaactgtgtctgcagcgggctctgtgtctcctctgtgcttaacaacgtccgagaacccatagcttcccacctgctgatcgcttctctggaatttaattatttttcaataaattctgtagtttatactgtatatgagacattttaaagatagttgaaatgactgtaaaggtggtgtgtctgccatggagaccgtgtgttgtccactggcagggaaaatgatcacctctaacttgcagatagtactttattcattattttcttgtctgtttttctttgctaaacaaccacagacagtttcagtgtcatagatggccccagagtttgcctcggctgctggttccatagcggaagaacgcatctgccttctctgctgtaaataaaggggagtcactagcgaagtcaggctgagcgttccgctgacaatgaactacgtccgtcacatgctgcagccttttaaagaaacgtatttgtgcatacagcggtcactgtagagctgcaacagcacctccggaccacagtcacctttagctttccgttccgtttgtttttctttttaataattgtagccaataaagttattgtctgttca
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Creative Commons Attribution 4.0 International License (CC BY 4.0).
If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596.
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