ver.2
Home
|
Help
|
Advanced search
Previous release (v1)
2025-12-23 11:55:54, GGRNA.v2 : RefSeq release 232 (Sep, 2025)
LOCUS NR_197270 1286 bp RNA linear ROD 25-JUL-2024
DEFINITION Rattus norvegicus glyceraldehyde-3-phosphate dehydrogenase,
pseudogene 119 (Gapdh-ps119), non-coding RNA.
ACCESSION NR_197270
VERSION NR_197270.1
KEYWORDS RefSeq.
SOURCE Rattus norvegicus (Norway rat)
ORGANISM Rattus norvegicus
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
Muroidea; Muridae; Murinae; Rattus.
REFERENCE 1 (bases 1 to 1286)
AUTHORS Kornberg,M.D., Sen,N., Hara,M.R., Juluri,K.R., Nguyen,J.V.,
Snowman,A.M., Law,L., Hester,L.D. and Snyder,S.H.
TITLE GAPDH mediates nitrosylation of nuclear proteins
JOURNAL Nat Cell Biol 12 (11), 1094-1100 (2010)
PUBMED 20972425
REFERENCE 2 (bases 1 to 1286)
AUTHORS Baba,T., Kobayashi,H., Kawasaki,H., Mineki,R., Naito,H. and
Ohmori,D.
TITLE Glyceraldehyde-3-phosphate dehydrogenase interacts with
phosphorylated Akt resulting from increased blood glucose in rat
cardiac muscle
JOURNAL FEBS Lett 584 (13), 2796-2800 (2010)
PUBMED 20488185
REFERENCE 3 (bases 1 to 1286)
AUTHORS Sen,N., Hara,M.R., Ahmad,A.S., Cascio,M.B., Kamiya,A., Ehmsen,J.T.,
Agrawal,N., Hester,L., Dore,S., Snyder,S.H. and Sawa,A.
TITLE GOSPEL: a neuroprotective protein that binds to GAPDH upon
S-nitrosylation
JOURNAL Neuron 63 (1), 81-91 (2009)
PUBMED 19607794
REMARK Erratum:[Neuron. 2009 Sep 10;63(5):709. Aggrawal, Nishant
[corrected to Agrawal, Nishant]]
REFERENCE 4 (bases 1 to 1286)
AUTHORS Foster,L.J., Rudich,A., Talior,I., Patel,N., Huang,X.,
Furtado,L.M., Bilan,P.J., Mann,M. and Klip,A.
TITLE Insulin-dependent interactions of proteins with GLUT4 revealed
through stable isotope labeling by amino acids in cell culture
(SILAC)
JOURNAL J Proteome Res 5 (1), 64-75 (2006)
PUBMED 16396496
REFERENCE 5 (bases 1 to 1286)
AUTHORS Hara,M.R., Agrawal,N., Kim,S.F., Cascio,M.B., Fujimuro,M.,
Ozeki,Y., Takahashi,M., Cheah,J.H., Tankou,S.K., Hester,L.D.,
Ferris,C.D., Hayward,S.D., Snyder,S.H. and Sawa,A.
TITLE S-nitrosylated GAPDH initiates apoptotic cell death by nuclear
translocation following Siah1 binding
JOURNAL Nat Cell Biol 7 (7), 665-674 (2005)
PUBMED 15951807
REFERENCE 6 (bases 1 to 1286)
AUTHORS Ishida,A., Tada,Y., Nimura,T., Sueyoshi,N., Katoh,T., Takeuchi,M.,
Fujisawa,H., Taniguchi,T. and Kameshita,I.
TITLE Identification of major Ca(2+)/calmodulin-dependent protein kinase
phosphatase-binding proteins in brain: biochemical analysis of the
interaction
JOURNAL Arch Biochem Biophys 435 (1), 134-146 (2005)
PUBMED 15680915
REFERENCE 7 (bases 1 to 1286)
AUTHORS Andrade,J., Pearce,S.T., Zhao,H. and Barroso,M.
TITLE Interactions among p22, glyceraldehyde-3-phosphate dehydrogenase
and microtubules
JOURNAL Biochem J 384 (Pt 2), 327-336 (2004)
PUBMED 15312048
REFERENCE 8 (bases 1 to 1286)
AUTHORS Wu,K., Aoki,C., Elste,A., Rogalski-Wilk,A.A. and Siekevitz,P.
TITLE The synthesis of ATP by glycolytic enzymes in the postsynaptic
density and the effect of endogenously generated nitric oxide
JOURNAL Proc Natl Acad Sci U S A 94 (24), 13273-13278 (1997)
PUBMED 9371836
REMARK Erratum:[Proc Natl Acad Sci U S A 1998 Mar 3;95(5):2714]
COMMENT VALIDATED REFSEQ: This record has undergone validation or
preliminary review. The reference sequence was derived from
JAXUCZ010000005.1.
##Evidence-Data-START##
Transcript is intronless :: SRR26360176.1134614.1,
SRR23984936.903615.1 [ECO:0000345]
##Evidence-Data-END##
PRIMARY REFSEQ_SPAN PRIMARY_IDENTIFIER PRIMARY_SPAN COMP
1-1286 JAXUCZ010000005.1 116787571-116788856
FEATURES Location/Qualifiers
source 1..1286
/organism="Rattus norvegicus"
/mol_type="transcribed RNA"
/strain="BN"
/db_xref="taxon:10116"
/chromosome="5"
/map="5"
gene 1..1286
/gene="Gapdh-ps119"
/note="glyceraldehyde-3-phosphate dehydrogenase,
pseudogene 119"
/pseudo
/db_xref="GeneID:134486952"
/db_xref="RGD:401988152"
misc_RNA 1..1286
/gene="Gapdh-ps119"
/product="glyceraldehyde-3-phosphate dehydrogenase,
pseudogene 119"
/pseudo
/db_xref="GeneID:134486952"
/db_xref="RGD:401988152"
exon 1..1286
/gene="Gapdh-ps119"
/inference="alignment:Splign:2.1.0"
/pseudo
ORIGIN
ctctgctcctccctgttctagagacagccgcatcttcttgtgcagtgccagcctcgtctcatagacaagatggtgaaggtcggtgtgaacggatttggccgtatcggacgcctggttaccagggctgccttctcttgtgacaaagtggacattgttgccatcaacgaccccttcattgacctcaactacatggtctacatgttccagtatgactctacccacggcaagttcaacggcacagtcaaggctgagaatgggaagctggtcatcaacgggaaacccatcaccatcttccaggagcgagatcccgctaacatcaaatggggtgatgctggtgctgagtatgtcgtggagtctactggcgtcttcaccaccatggagaaggctggggctcacctgaagggtggggccaaaagggtcatcatctccgccccttccgctgatgcccccatgtttgtgatgggtgtgaaccacgagaaatatgacaactccctcaagattgtcagcaatgcatcctgcaccaccaactgcttagcccccctggccaaggtcatccatgacaactttggcatcgtggaagggctcatgaccacagtccatgccatcactgccactcagaagactgtggatggcccctctggaaagctgtggcgtgatggccgtggggcagcccagaacatcatccctgcatccactggtgctgccaaggctgtgggcaaggtcatcccagagctgaacgggaagctcactggcatggccttccgtgttcctacccccaatgtatccgttgtggatctgacatgccgcctggagaaacctgccaagtatgatgacatcaagaaggtggtgaagcaggcggccgagggcccactaaagggcatcctgggctacactgaggaccaggttgtctcctgtgacttcaacagcaactcccattcttccacctttgatgctggggctggcattgctctcaatgacaactttgtgaagctcatttcctggtatgacaatgaatatggctacagcaacagggtggtggacctcatggcctacatggcctccaaggagtaagaaaccctggaccacccagcccagcaaggatactgagagcaagagagaggccctcagttgctgaggagtccccatcccaactcagcccccaacactgagcatctccctcacaattccatcccagaccccataacaacaggagaggcctggggagccctcccttctctcgaataccatcaataaagttcgctgcaccctcttaaaaaaaaataaaa
//
by
@meso_cacase at
DBCLS
This page is licensed under a
Creative Commons Attribution 4.0 International License (CC BY 4.0).
If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596.
[Full Text]