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2025-09-13 16:55:03, GGRNA.v2 : RefSeq release 231 (Jul, 2025)

LOCUS       NR_132638                465 bp    RNA     linear   ROD 03-JUN-2025
DEFINITION  Rattus norvegicus LIM homeobox 1, opposite strand (Lhx1os), long
            non-coding RNA.
ACCESSION   NR_132638
VERSION     NR_132638.1
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 465)
  AUTHORS   Bonaldo,M.F., Lennon,G. and Soares,M.B.
  TITLE     Normalization and subtraction: two approaches to facilitate gene
            discovery
  JOURNAL   Genome Res 6 (9), 791-806 (1996)
   PUBMED   8889548
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            JAXUCZ010000010.1.
            
            Sequence Note: This RefSeq record was created from genomic sequence
            data to make the sequence consistent with the reference genome
            assembly. The genomic coordinates used for the transcript record
            were based on transcript alignments.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BI281801.1, SRR26360194.1074150.1
                                           [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMEA5760383, SAMEA5760389
                                           [ECO:0000348]
            ##Evidence-Data-END##
            COMPLETENESS: complete on the 3' end.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-79                JAXUCZ010000010.1  69901969-69902047
            80-213              JAXUCZ010000010.1  69910745-69910878
            214-465             JAXUCZ010000010.1  69911887-69912138
FEATURES             Location/Qualifiers
     source          1..465
                     /organism="Rattus norvegicus"
                     /mol_type="transcribed RNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="10"
                     /map="10q26"
     gene            1..465
                     /gene="Lhx1os"
                     /note="LIM homeobox 1, opposite strand"
                     /db_xref="GeneID:102553190"
                     /db_xref="RGD:7595653"
     ncRNA           1..465
                     /ncRNA_class="lncRNA"
                     /gene="Lhx1os"
                     /product="LIM homeobox 1, opposite strand"
                     /db_xref="GeneID:102553190"
                     /db_xref="RGD:7595653"
     exon            1..79
                     /gene="Lhx1os"
                     /inference="alignment:Splign:2.1.0"
     exon            80..213
                     /gene="Lhx1os"
                     /inference="alignment:Splign:2.1.0"
     exon            214..465
                     /gene="Lhx1os"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
gcgtttagaggatcagtggcggcaggcccgcgcggtgccggcgactagcagcgagaagtcccggcttcttccaggtttggagatggcattgggggaccaacctcccgaggttgtgaggatgacaacagtactctgtgatgctgtccctcctcaggttggctgccatccctgctgatggagagagactggagactgtcagagaagattgtgccgatgcagaggcctcccagtgaagtgtgaagggatgggccttaaccagggttgaagaaaaaaagtgaagaagggagaacccaagaaaaggtggggacagttgggacttctgattacattcgtctggtacacttcttttgcactgtatgttatcatctccaaatttcacatttattgtagaaatctgcagtgtgtatgccccggccaaatgctgcttggctaaaaaagtgttaaataaaactgtaagaaatgcta
//

by @meso_cacase at DBCLS
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If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596. [Full Text]