2024-04-19 10:33:09, GGRNA.v2 : RefSeq release 222 (Jan, 2024)
LOCUS NM_024355 3216 bp mRNA linear ROD 22-MAR-2023 DEFINITION Rattus norvegicus axin 2 (Axin2), mRNA. ACCESSION NM_024355 XM_001081593 VERSION NM_024355.1 KEYWORDS RefSeq; RefSeq Select. SOURCE Rattus norvegicus (Norway rat) ORGANISM Rattus norvegicus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus. REFERENCE 1 (bases 1 to 3216) AUTHORS Qiu Z, Chen W, Liu Y, Jiang B, Yin L and Chen X. TITLE LncRNA AC061961.2 overexpression inhibited endoplasmic reticulum stress induced apoptosis in dilated cardiomyopathy rats and cardiomyocytes via activating wnt/beta-catenin pathway JOURNAL J Recept Signal Transduct Res 41 (5), 494-503 (2021) PUBMED 33092439 REFERENCE 2 (bases 1 to 3216) AUTHORS An YZ, Cho E, Ling J and Zhang X. TITLE The Axin2-snail axis promotes bone invasion by activating cancer-associated fibroblasts in oral squamous cell carcinoma JOURNAL BMC Cancer 20 (1), 987 (2020) PUBMED 33046030 REMARK Publication Status: Online-Only REFERENCE 3 (bases 1 to 3216) AUTHORS Wu Z, Liang Y and Yu S. TITLE Downregulation of microRNA-103a reduces microvascular endothelial cell injury in a rat model of cerebral ischemia by targeting AXIN2 JOURNAL J Cell Physiol 235 (5), 4720-4733 (2020) PUBMED 31650542 REFERENCE 4 (bases 1 to 3216) AUTHORS Otero L, Lacunza E, Vasquez V, Arbelaez V, Cardier F and Gonzalez F. TITLE Variations in AXIN2 predict risk and prognosis of colorectal cancer JOURNAL BDJ Open 5, 13 (2019) PUBMED 31632692 REMARK Publication Status: Online-Only REFERENCE 5 (bases 1 to 3216) AUTHORS Mishra A, Singh S, Tiwari V, Chaturvedi S, Wahajuddin M and Shukla S. TITLE Dopamine receptor activation mitigates mitochondrial dysfunction and oxidative stress to enhance dopaminergic neurogenesis in 6-OHDA lesioned rats: A role of Wnt signalling JOURNAL Neurochem Int 129, 104463 (2019) PUBMED 31078578 REFERENCE 6 (bases 1 to 3216) AUTHORS Leung JY, Kolligs FT, Wu R, Zhai Y, Kuick R, Hanash S, Cho KR and Fearon ER. TITLE Activation of AXIN2 expression by beta-catenin-T cell factor. A feedback repressor pathway regulating Wnt signaling JOURNAL J Biol Chem 277 (24), 21657-21665 (2002) PUBMED 11940574 REFERENCE 7 (bases 1 to 3216) AUTHORS Lustig B, Jerchow B, Sachs M, Weiler S, Pietsch T, Karsten U, van de Wetering M, Clevers H, Schlag PM, Birchmeier W and Behrens J. TITLE Negative feedback loop of Wnt signaling through upregulation of conductin/axin2 in colorectal and liver tumors JOURNAL Mol Cell Biol 22 (4), 1184-1193 (2002) PUBMED 11809809 REFERENCE 8 (bases 1 to 3216) AUTHORS Liu W, Dong X, Mai M, Seelan RS, Taniguchi K, Krishnadath KK, Halling KC, Cunningham JM, Boardman LA, Qian C, Christensen E, Schmidt SS, Roche PC, Smith DI and Thibodeau SN. TITLE Mutations in AXIN2 cause colorectal cancer with defective mismatch repair by activating beta-catenin/TCF signalling JOURNAL Nat Genet 26 (2), 146-147 (2000) PUBMED 11017067 REMARK Erratum:[Nat Genet 2000 Dec;26(4):501] REFERENCE 9 (bases 1 to 3216) AUTHORS Yamamoto H, Kishida S, Uochi T, Ikeda S, Koyama S, Asashima M and Kikuchi A. TITLE Axil, a member of the Axin family, interacts with both glycogen synthase kinase 3beta and beta-catenin and inhibits axis formation of Xenopus embryos JOURNAL Mol Cell Biol 18 (5), 2867-2875 (1998) PUBMED 9566905 REFERENCE 10 (bases 1 to 3216) AUTHORS Behrens J, Jerchow BA, Wurtele M, Grimm J, Asbrand C, Wirtz R, Kuhl M, Wedlich D and Birchmeier W. TITLE Functional interaction of an axin homolog, conductin, with beta-catenin, APC, and GSK3beta JOURNAL Science 280 (5363), 596-599 (1998) PUBMED 9554852 COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from AF017757.1. On Jun 25, 2006 this sequence version replaced XM_001081593.1. Publication Note: This RefSeq record includes a subset of the publications that are available for this gene. Please see the Gene record to access additional publications. ##Evidence-Data-START## Transcript exon combination :: AF017757.1 [ECO:0000332] ##Evidence-Data-END## ##RefSeq-Attributes-START## RefSeq Select criteria :: based on conservation, expression, longest protein ##RefSeq-Attributes-END## FEATURES Location/Qualifiers source 1..3216 /organism="Rattus norvegicus" /mol_type="mRNA" /db_xref="taxon:10116" /chromosome="10" /map="10q32.1" gene 1..3216 /gene="Axin2" /gene_synonym="axil; axin-2" /note="axin 2" /db_xref="GeneID:29134" /db_xref="RGD:69259" exon 1..899 /gene="Axin2" /gene_synonym="axil; axin-2" /inference="alignment:Splign:2.1.0" misc_feature 1..3 /gene="Axin2" /gene_synonym="axil; axin-2" /note="upstream in-frame stop codon" CDS 85..2601 /gene="Axin2" /gene_synonym="axil; axin-2" /note="conductin; axin-like protein; axis inhibition protein 2" /codon_start=1 /product="axin-2" /protein_id="NP_077331.1" /db_xref="GeneID:29134" /db_xref="RGD:69259" /translation="
MSSAVLVTLLPDPSSSFREDAPRPPVPGEEGETPPCQPSVGKVQSTKPMPVSSNARRNEDGLGEPEGRASPDSPLTRWTKSLHSLLGDQDGAYLFRTFLEREKCVDTLDFWFACNGFRQMNLKDTKTLRVAKAIYKRYIENNSVVSKQLKPATKTYIRDGIKKQQIGSVMFDQAQTEIQAVMEENAYQVFLTSDIYLEYVRSGGENTAYMSNGGLGSLKVLCGYLPTLNEEEEWTCADLKCKLSPTVVGLSSKTLRATASVRSTETAENGFRSFKRSEPVNPYHVGSGYVFAPATSANDSELSSDALTDDSMSMTDSSVDGIPPYRMGSKKQLQREMHRSVKANGQVSLPHFPRTHRLPKEMTPVEPAAFAAELISRLEKLKLELESRHSLEERLQQIREDEEKEGSEQALSSRDGAPVQHPLALLPSGSYEEDPQTILDDHLSRVLKTPGCQSPGVGRYSPRSRSPDHHHHHHQQCHALLPTGGKLPPEAACPLLGGKSFLTKQTTKHVHHHYIHHHAVPKTKEEIEAEATQRVRCLCPGGTDYYCYSKCKSHSKPPEPLPGEQFCGSRGGTLPKRNTKGTEPGLALPAREGGMSSAAGAPQLPGEEGDRSQDVWQWMLESERQSKSKPHSTQSIRKSYPLESARAPPGERVSRHHLLGASGHPRSAARAHPFTQDPAMPPLTPPNTLAQLEEACRRLAEVSKPQKQRCCVASQQRDRNHPATGQAGPTSFSNPSLASEDHKEPKRLASVHALQASELIVTYFFCGEEIPYRRMLKAQSLTLGHFKEQLSKKGNYRYYFKKASDEFACGAVFEEIWDDETVLPMYEGRILGKVERID"
misc_feature 85..309 /gene="Axin2" /gene_synonym="axil; axin-2" /note="propagated from UniProtKB/Swiss-Prot (O70240.1); Region: Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite" misc_feature 112..309 /gene="Axin2" /gene_synonym="axil; axin-2" /note="Axin-1 tankyrase binding domain; Region: AXIN1_TNKS_BD; pfam16646" /db_xref="CDD:435487" misc_feature 145..174 /gene="Axin2" /gene_synonym="axil; axin-2" /note="propagated from UniProtKB/Swiss-Prot (O70240.1); Region: Tankyrase-binding motif" misc_feature 328..678 /gene="Axin2" /gene_synonym="axil; axin-2" /note="Regulator of G protein signaling (RGS) domain found in the Axin protein; Region: RGS_Axin; cd08707" /db_xref="CDD:188662" misc_feature order(340..351,358..360,409..411,418..423,430..435, 439..441,469..474,478..486,490..495) /gene="Axin2" /gene_synonym="axil; axin-2" /note="APC binding site [polypeptide binding]; other site" /db_xref="CDD:188662" misc_feature 982..1083 /gene="Axin2" /gene_synonym="axil; axin-2" /note="propagated from UniProtKB/Swiss-Prot (O70240.1); Region: Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite" misc_feature 1063..1323 /gene="Axin2" /gene_synonym="axil; axin-2" /note="propagated from UniProtKB/Swiss-Prot (O70240.1); Region: Interaction with GSK3B. /evidence=ECO:0000250" misc_feature 1276..1389 /gene="Axin2" /gene_synonym="axil; axin-2" /note="propagated from UniProtKB/Swiss-Prot (O70240.1); Region: Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite" misc_feature 1321..1512 /gene="Axin2" /gene_synonym="axil; axin-2" /note="propagated from UniProtKB/Swiss-Prot (O70240.1); Region: Interaction with beta-catenin. /evidence=ECO:0000250" misc_feature 1381..1488 /gene="Axin2" /gene_synonym="axil; axin-2" /note="Axin beta-catenin binding domain; Region: Axin_b-cat_bind; pfam08833" /db_xref="CDD:430248" misc_feature 1432..1533 /gene="Axin2" /gene_synonym="axil; axin-2" /note="propagated from UniProtKB/Swiss-Prot (O70240.1); Region: Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite" misc_feature 1786..2130 /gene="Axin2" /gene_synonym="axil; axin-2" /note="propagated from UniProtKB/Swiss-Prot (O70240.1); Region: Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite" misc_feature 2218..2316 /gene="Axin2" /gene_synonym="axil; axin-2" /note="propagated from UniProtKB/Swiss-Prot (O70240.1); Region: Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite" misc_feature 2350..2598 /gene="Axin2" /gene_synonym="axil; axin-2" /note="Domain present in Dishevelled and axin; Region: DAX; smart00021" /db_xref="CDD:197474" exon 900..1040 /gene="Axin2" /gene_synonym="axil; axin-2" /inference="alignment:Splign:2.1.0" exon 1041..1143 /gene="Axin2" /gene_synonym="axil; axin-2" /inference="alignment:Splign:2.1.0" exon 1144..1284 /gene="Axin2" /gene_synonym="axil; axin-2" /inference="alignment:Splign:2.1.0" exon 1285..1784 /gene="Axin2" /gene_synonym="axil; axin-2" /inference="alignment:Splign:2.1.0" exon 1785..1979 /gene="Axin2" /gene_synonym="axil; axin-2" /inference="alignment:Splign:2.1.0" exon 1980..2210 /gene="Axin2" /gene_synonym="axil; axin-2" /inference="alignment:Splign:2.1.0" exon 2211..2306 /gene="Axin2" /gene_synonym="axil; axin-2" /inference="alignment:Splign:2.1.0" exon 2307..2474 /gene="Axin2" /gene_synonym="axil; axin-2" /inference="alignment:Splign:2.1.0" exon 2475..3197 /gene="Axin2" /gene_synonym="axil; axin-2" /inference="alignment:Splign:2.1.0" ORIGIN
tgagaggaactggaagaagaaaaaggaagaggaaaaaaaaaaagcaaaacaaaacccaaactcagtgagacgctctccctcaccatgagtagcgctgtgttagtgactctccttccagatccaagcagcagcttccgcgaggatgctccgcggcccccggttcccggagaagaaggggagaccccaccgtgtcagcctagcgtgggcaaggtccagtccaccaaacctatgcctgtctcctctaacgctaggcggaatgaagatgggctgggggagcccgaggggcgggcctccccagattcccctctgaccaggtggaccaagtctttgcactccttgttgggggaccaagatggtgcatacctcttccggactttcctggagagggagaaatgtgtggataccctggacttctggtttgcctgcaatgggttcaggcagatgaacttgaaggataccaaaactttgcgagtggccaaagcaatctacaagaggtacattgagaacaacagtgttgtctccaaacagctgaaacccgccaccaagacctacataagagatggcatcaagaagcagcagatcggctcggtcatgtttgaccaggcgcagacggagattcaggcggtgatggaggaaaatgcctatcaggtgttcttgacttctgacatatacctcgaatatgtgaggagtgggggagaaaacacagcttacatgagcaatgggggactggggagcctaaaggtcttatgtggctacctccccaccctgaatgaggaagaggagtggacatgtgccgacctgaagtgcaaactttcacccaccgtggttggcctatccagcaaaactctccgggccacagcgagcgtgagatccacagaaacggctgaaaacggattcagatccttcaagagaagcgaaccggttaatccttatcacgtaggttctggctatgtctttgcaccagccaccagcgccaacgacagcgagttatccagcgacgcgctgaccgacgattccatgtccatgacagacagtagcgtagatggaatccctccttaccgcatggggagtaagaaacaactccagagagagatgcaccgcagtgtgaaggccaatggccaagtgtctctacctcacttcccgagaacccaccgcctgcccaaggagatgacgcccgtggaacctgctgccttcgccgcagagctcatctccaggctggagaagctgaaactggagctggagagccgccacagcctggaggaacggctgcagcagatccgggaggatgaagaaaaggaggggtctgagcaggccctgagctcacgggatggagcaccggtccaacaccccctggccctcttaccctctggcagctatgaagaggacccacaaaccatcttggacgaccacctgtccagggtcctcaagacccccggctgccagtcccctggtgtgggccgctacagcccacgctcccgctcccccgaccaccaccaccaccaccatcagcagtgtcacgcccttcttccaactgggggcaagctgccccccgaggctgcttgcccgctccttggaggcaagagcttcctgaccaaacagacgacgaagcacgtccaccaccactacatccaccaccacgccgtccctaagaccaaggaggagatcgaggcagaagccacacagagagtacgctgcctctgccctggaggcacagattattactgctactccaagtgcaagagccactcgaagcctccagagcccctccctggggagcagttttgtggcagcagaggtggcaccttgccaaaacggaatacgaaaggcacagaaccgggtctggcactgccggccagggaaggagggatgtccagtgcagcaggggcccctcagcttcctggggaagaaggagaccggtcacaggatgtctggcagtggatgttggagagtgagcgtcagagcaagtccaagccccatagtacccaaagcataagaaagagctacccgttggagtctgcccgcgcgcccccaggcgaacgagtcagccggcaccatctgctgggggccagtggacacccccgctcagcggcccgggctcacccatttacccaggaccctgccatgcctcccctaaccccacccaacaccttggcgcagctagaggaagcctgccgcaggctggccgaggtgtcaaagccccagaaacagaggtgctgcgtggccagtcagcagagggacaggaaccacccagccacaggtcaggcaggacccacatccttctccaacccgagcctggcttcagaagatcacaaagagccaaagagactggctagtgtccacgcactccaagccagcgagctgattgttacctactttttctgtggagaagaaattccatacaggaggatgctgaaggcgcagagcttgactctgggccacttcaaggagcagctcagcaaaaagggaaattacaggtattacttcaagaaggcgagtgacgaatttgcctgtggagcagtctttgaggagatctgggatgatgagacagtgctccccatgtacgaaggcaggatcctgggcaaagtggagaggatcgactgagcctcggcctccgccgcgtgcacctccgcgtgcacctccgcgtgcaccacggagccggagcccagagagacctgtctcaggcctacacaacagccatgaaatattttgaaggaaaatgaaaccaattaagaagacaaagcctagggagggactggcccctgggccttcaggagggcgggggtggttggttttcaatatccacgagctgggtactgagatcagaaaagcccgaactatttattcaaaacatgaccactctgggctatagaagatgctgagtgctcgagagactgccatacataatagatggcttcctagggatctgaaatccatagactaagagaaaactgtgtatagcttgcccgaacaggagtccttactgatatttattgaacagtcgattcccctaccccactcccacccccaacccccaacccccagtttatgctgctttaaacctggaaatgagagagagaagtttggtttgctgtctatgcttaagagccaagccgggaacgcattaatcatttcttcgttaacagaggaatccgctctgcatggcatctctccaagtgaagacaggcttctttacaaaaaaaaaaaaaaaaaaaaaaa
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If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596.
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