LOCUS       NM_001433432            1056 bp    mRNA    linear   ROD 21-AUG-2024
DEFINITION  Rattus norvegicus TGFB-induced factor homeobox 2-like, X-linked 2
            (Tgif2lx2), mRNA.
ACCESSION   NM_001433432 XM_056985152
VERSION     NM_001433432.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 1056)
  AUTHORS   Gaudet,P., Livstone,M.S., Lewis,S.E. and Thomas,P.D.
  TITLE     Phylogenetic-based propagation of functional annotations within the
            Gene Ontology consortium
  JOURNAL   Brief Bioinform 12 (5), 449-462 (2011)
   PUBMED   21873635
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            JAXUCZ010000021.1.
            
            On Aug 19, 2024 this sequence version replaced XM_056985152.2.
            
            ##Evidence-Data-START##
            Transcript is intronless :: SRR26360186.1207127.1,
                                        SRR26360181.232288.1 [ECO:0000345]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-1056              JAXUCZ010000021.1  88329775-88330830
FEATURES             Location/Qualifiers
     source          1..1056
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="X"
                     /map="Xq31"
     gene            1..1056
                     /gene="Tgif2lx2"
                     /gene_synonym="RGD1561826"
                     /note="TGFB-induced factor homeobox 2-like, X-linked 2"
                     /db_xref="GeneID:367885"
                     /db_xref="RGD:1561826"
     exon            1..1056
                     /gene="Tgif2lx2"
                     /gene_synonym="RGD1561826"
                     /inference="alignment:Splign:2.1.0"
     misc_feature    112..114
                     /gene="Tgif2lx2"
                     /gene_synonym="RGD1561826"
                     /note="upstream in-frame stop codon"
     CDS             118..786
                     /gene="Tgif2lx2"
                     /gene_synonym="RGD1561826"
                     /note="homeobox protein TGIF2LX"
                     /codon_start=1
                     /product="TGFB-induced factor homeobox 2-like, X-linked 2"
                     /protein_id="NP_001420361.1"
                     /db_xref="GeneID:367885"
                     /db_xref="RGD:1561826"
                     /translation="

MEEAEGSPEETQDTNKKGTSSRIRLERTCKKKFRDSQKLQKRYLLPPESVRILRDWLSKHRFNAYPTEADKQKLSKKTNLSYLQVSNWFTNARRRLLPEILQNPDISHKDQAANAAQKQHSNPSNEVKTQLNAKSKMQDLPVPICQESQEKMSDLESYLGQKVISEGEKEKEDRNLISDPLSSPELAWPVEKPDFSNFYMLVDAAVQKAAEMEEQKKQNPNP"

     misc_feature    order(235..246,250..252,310..312,328..330,367..369,
                     373..378,385..390,394..402)
                     /gene="Tgif2lx2"
                     /gene_synonym="RGD1561826"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:238039"
     misc_feature    order(238..240,247..249,376..378,385..390,397..399)
                     /gene="Tgif2lx2"
                     /gene_synonym="RGD1561826"
                     /note="specific DNA base contacts [nucleotide binding];
                     other site"
                     /db_xref="CDD:238039"
     misc_feature    286..402
                     /gene="Tgif2lx2"
                     /gene_synonym="RGD1561826"
                     /note="Homeobox KN domain; Region: Homeobox_KN; pfam05920"
                     /db_xref="CDD:428673"
ORIGIN      

tgtctggcaacaaatgaggatccagttcagaaatcagtgaaggacttccctggatctcccgggatcatacttcagtcatccctggtctctaagccactgaaggcagtcctctagaacatggaggaggctgaaggtagtccggaggaaacccaggacactaataaaaaaggcacctcgagcaggataagacttgagagaacctgtaagaagaagtttcgtgacagccagaagcttcagaaaagatacctgctgccacccgagtccgtgaggatcctccgtgactggctctctaagcacaggtttaatgcctatcctactgaagcagacaaacaaaagctgtccaagaagaccaatttatcttacttgcaggtctccaactggtttacaaatgcccgcagacgccttctcccagaaattcttcaaaatccagacattagccacaaagaccaggctgccaatgcagcccagaaacagcactccaatccatccaatgaggtcaagacacagcttaatgctaaatcaaaaatgcaggatttgcccgtgccaatatgccaagaatctcaagagaaaatgtcagatctggagtcttatcttggccagaaggtgatctcagaaggcgagaaagaaaaagaagacaggaatttaatcagcgatcctctgtcttcacctgaacttgcatggccagtggaaaagcccgattttagcaacttctacatgttggttgatgctgctgtacagaaggcagcagaaatggaggagcagaagaagcaaaatcccaacccataatttccccaacaacagtcctttgaactctggtgggttcatttattttcaaccggatttatcttgtaatgtcgtcttctattccatattattccccctgttcagaaatcttttccattatcacatctcaattttgctaaatacctcaatgttttctgatgaaatcactatccatgatattcagcataaacaaatttttaacttcatctgctcccctgggctttaagaactatatatttacataatattaaacatcatgcaattttcagtcaa

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