LOCUS       NM_001400770            4397 bp    mRNA    linear   ROD 07-OCT-2023
DEFINITION  Rattus norvegicus similar to human chromosome 5 open reading frame
            24 (C17h5orf24), mRNA.
ACCESSION   NM_001400770 XM_003751644
VERSION     NM_001400770.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 4397)
  AUTHORS   Strausberg RL, Feingold EA, Grouse LH, Derge JG, Klausner RD,
            Collins FS, Wagner L, Shenmen CM, Schuler GD, Altschul SF, Zeeberg
            B, Buetow KH, Schaefer CF, Bhat NK, Hopkins RF, Jordan H, Moore T,
            Max SI, Wang J, Hsieh F, Diatchenko L, Marusina K, Farmer AA, Rubin
            GM, Hong L, Stapleton M, Soares MB, Bonaldo MF, Casavant TL,
            Scheetz TE, Brownstein MJ, Usdin TB, Toshiyuki S, Carninci P,
            Prange C, Raha SS, Loquellano NA, Peters GJ, Abramson RD, Mullahy
            SJ, Bosak SA, McEwan PJ, McKernan KJ, Malek JA, Gunaratne PH,
            Richards S, Worley KC, Hale S, Garcia AM, Gay LJ, Hulyk SW,
            Villalon DK, Muzny DM, Sodergren EJ, Lu X, Gibbs RA, Fahey J,
            Helton E, Ketteman M, Madan A, Rodrigues S, Sanchez A, Whiting M,
            Madan A, Young AC, Shevchenko Y, Bouffard GG, Blakesley RW,
            Touchman JW, Green ED, Dickson MC, Rodriguez AC, Grimwood J,
            Schmutz J, Myers RM, Butterfield YS, Krzywinski MI, Skalska U,
            Smailus DE, Schnerch A, Schein JE, Jones SJ and Marra MA.
  CONSRTM   Mammalian Gene Collection Program Team
  TITLE     Generation and initial analysis of more than 15,000 full-length
            human and mouse cDNA sequences
  JOURNAL   Proc Natl Acad Sci U S A 99 (26), 16899-16903 (2002)
   PUBMED   12477932
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            JACYVU010000284.1.
            
            On Apr 7, 2023 this sequence version replaced NM_001400770.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: FQ228424.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMD00132261, SAMD00132262
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-226               JACYVU010000284.1  8932733-8932958     c
            227-4397            JACYVU010000284.1  8923041-8927211     c
FEATURES             Location/Qualifiers
     source          1..4397
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="17"
                     /map="17p14"
     gene            1..4397
                     /gene="C17h5orf24"
                     /gene_synonym="RGD1566359"
                     /note="similar to human chromosome 5 open reading frame
                     24"
                     /db_xref="GeneID:498701"
                     /db_xref="RGD:1566359"
     exon            1..226
                     /gene="C17h5orf24"
                     /gene_synonym="RGD1566359"
                     /inference="alignment:Splign:2.1.0"
     exon            227..4397
                     /gene="C17h5orf24"
                     /gene_synonym="RGD1566359"
                     /inference="alignment:Splign:2.1.0"
     CDS             230..799
                     /gene="C17h5orf24"
                     /gene_synonym="RGD1566359"
                     /codon_start=1
                     /product="UPF0461 protein C5orf24 homolog"
                     /protein_id="NP_001387699.1"
                     /db_xref="GeneID:498701"
                     /db_xref="RGD:1566359"
                     /translation="

MMHPVAGGNPAFCGPGKPPCLSDDAAMRAADQFDLYSSQQSKYSHTVSHKPMLCQRQDPLNEAHLQPTSGRNTEIKDELKKKKNLNRSGKRGRPSGTTKSAGYRTSTGRPLGTTKAAGFKTSPGRPLGTTKAAGYKVSPGRPPGSIKALSRLADLGYGCGTAAFPYPMMHSRVVHGVQETSGEVKPPSE"

     misc_feature    230..796
                     /gene="C17h5orf24"
                     /gene_synonym="RGD1566359"
                     /note="Family of unknown function (DUF5568); Region:
                     DUF5568; pfam17724"
                     /db_xref="CDD:435992"
ORIGIN      

attccggggctgtggcggtctcttcctcccgcgtccggggcccgcggtgagggctcttgggagtcgggcgctggcgtgggcctcgccgccgccgccgccggccctctgccgtgactggactgggccgcacggagagggcgcggccggactgaacggaacgggcgggggctttcctgcctatgggcggcccctgggcgctctgagggccgggctccgagcggccgaggaaatgatgcacccggttgcaggcgggaacccagcgttctgcgggcctggcaagcctccctgcctcagtgatgacgccgccatgagagccgctgatcagtttgatctgtactcctcccagcaaagcaagtacagccacacagtcagccacaaacccatgctctgtcagaggcaagacccattaaacgaagcacacttgcagcctaccagtggcagaaacacagagataaaagatgaactaaagaaaaagaaaaacctcaatcgatctggtaagcgaggccggccttcgggaaccaccaagtcagcaggataccggaccagcacaggcagacccctgggaaccaccaaagcagctggatttaagaccagtccaggcaggcctctgggtacaaccaaagctgcaggatacaaagtcagcccaggcaggcctccaggtagcattaaagctctgtcccgtcttgcagatcttggttatggctgtggcactgctgcctttccttaccctatgatgcacagtagagtggttcacggggttcaggaaacgagtggtgaggtcaagccacccagtgaatgagcgagacaggagagcacgtgctaggagcaaattgttagtcaccccaaagcttcttgctttaatttgacataatcataccacgtggactccccagttctgtttctgtttgctttccctcaccccgcacttctttttctttctttttagctcagaagctgccacaattgagaggtgcactttgggcaggagtagtacattgtgtctgtgttgtacacggttcacaggacaggacactcagctcagtcgtctatgctttccctttgggctgttctaagtggactccttttacttgtgagtaatccagagcgaggcactgtaactgaagcggggagcagcaactagtgagcagatgggcggggaaggctgtgaaataagacacagctctctggatgctttggaacttaaaacacagcttcttctttattgattcgcatggcattagtgatcatcattcctaaagcactgtgcagtgtctgcctcgaagagagcatagttacagggtgtgtgttttcagttgcctaagagcatatgcaccaaacactacaaacagctcaaacccttgagtacgtcagaaacctgcacagcatatttaatatacaagaaaaaagaacccttagaagtctgcatgtaactatagtcattctgttttgtgtttcatatacttagtattatattttaaaacatttattactattgttcatttatttaaaaaaatttttttttttttagtttttctgcgtaattgttattacacttcattagtacttaattgcattttcaggtttatacctaccaaaggacacaaattgagtggtcaactgcaaaattggtctaagcaggaagcagtgtcctggctgtcaggacccaaataccaataaatgtaacttggtatgcgcgaaacctgtgaaatgagcgctgggtagcataaaaatggcagcatggctccaggatgaccgtttcttccaaaagaaggctccctggtgcggcttgctttagacacagtgtagaaaagtcaagtactgggcatgaaggtatactcatttagggtaatctttggaaatgtttcctgttaatacacattttatttattttgaatttgttctgagtaaactgttataaactttaagattgaaaagctttccgtgggtcaggtatggaggcccaggaatttgattccagcatttgggaggctgaggcaggcagagctctgagtgtgtgaggtctacatagtgccaggacagccaatgctaggtagagagaccctatctttaaaaaaacaacaaagaaaagcttttactgaacttaaaaaattatgttttttacttgcattttaaatgcttttgagaataaaatgtagatttaaaggacttaaaaactttaaaaataatcagaaatttaaaagggacacacgtactggttggttaggcttgctctcagtccatgcaaactgactgtatgtaaataccatgtttcagacctctgtcgggggacaagcagcaaatctcaggtgccccatgatagctgacacaacagctgggcatccgctcctgcagtagtacgtgctttattatgtgtggagactgtaacctcagcagtaccagcttcgcacaaaccacaggggacagtgagcaatgctggacgaccactgaaccagcctagaatataaaactgaatgacttattcagaacagtgtaacttctggcacatgcagatgcttgtcttcattggcgtgttcatctgtcacgtagctgtttctgaagttgttcagcagctggctgttgagaattccttgcaaggctagttcctgaggacagttgaaatagtctagtctagaatgtcaaggacttgggtgcatgttgtgtttcctcatgagtctacatggcatcctttcagtttgatttccttcctgattttctaccttgtcatttcttcttgccctttcccacacctatccccttccctcagctctccagcacatctactcagtggtgctgtgctgtgtgtcagaagatagagtgggtggcttgtatatgttgatgacagtgtttgtattaggagcttgatcccaggaacaggggtggatggatggatggctacagttgtgagtggatgacgtcacttaggaaactgcgagcagcacttgggatatgaaatgtgtgcactggtgaacacctgattctacttttctccctgtggacagtttaccagtgccacgttggagaggcacggtgaggacaggaaggaagtcttcacataaaaatatttttgcttctacatgatctaaagactgcattctgcatcttttgtaacatggtcctttgtcatgacagacactgaaatagcatgtgaaacattgcctagatgccagtatattcagtcggggaaaactgttgtcccctacccccaccccactgtataattgttccttaaaaggtaaattgctaattttatactgtgtgattctattcttcataaataggtttcactattctatattaaactttgtcagaaaatgatctactattcaagtaagtttgttttacttttttctgaaaaggatattttacatgccttatttattattgttatcaaaacaaataaggggtcaatacagatgaaaatttcactttccacagctatcaccttgcctaattaatctttagtatggggtgattttgatactatctttggagttttgcactggatatttaaaaatatatattggcacaatatattgaaaaattaaatagtatttggtttaatttttaatatttgaaacattttttaattagtgtttaaatcagactaacaattctttgtatttttaattacttttttaaaagggacatctgaaaagtggtatttattcattccaaactggtgtttgtgtgaatttacatatattttcatgaaatatgagtaggatttctttgaggtaaaatctggatccatttattatcaggttaaagacgcttcatccagtgtaataataaccacagtgtgtaagtttaaatggtgaacttcttcatgctttaagaagctttaagagaacagttcaggggatactaagatgattgctctgtcagttccttgtctatatgcagtaaaactttatgatccgttacagcagtgtaacagttcacaacagtcttgggcataaaaagttttgatgctcttttaatctgtctgttctagcataatgactgcgttcaaactcttaagatgtatctaaatatttgcttttctcccttttccttccaagtagacagacctgtgctctcacatacaatgtatttaagtttttagaagtgatgctgtagtaagtcagtcgtgtgatttaatcaggccactcttgattctttgattcacagtttcctttttccacagacaattatgagaaacaattaccagttaactgataataagcacgttgtcctctgctgtaaaaagtctgaatagatactgtgtatgtttccatgtccatgaacttaagctactcgtgtgcagttatgtgtatggaatggagtagtgttcatgatttgtatctacatcatcatatggatgtatatttattaataaagtcatcactttaaaacca

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