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Previous release (v1)
2024-04-29 04:15:06, GGRNA.v2 : RefSeq release 222 (Jan, 2024)
LOCUS NM_001395157 8419 bp mRNA linear ROD 22-MAR-2023
DEFINITION Rattus norvegicus trinucleotide repeat containing adaptor 6A
(Tnrc6a), mRNA.
ACCESSION NM_001395157 XM_008759748
VERSION NM_001395157.1
KEYWORDS RefSeq; RefSeq Select.
SOURCE Rattus norvegicus (Norway rat)
ORGANISM Rattus norvegicus
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
Muroidea; Muridae; Murinae; Rattus.
REFERENCE 1 (bases 1 to 8419)
AUTHORS Nawalpuri B, Sharma A, Chattarji S and Muddashetty RS.
TITLE Distinct temporal expression of the GW182 paralog TNRC6A in neurons
regulates dendritic arborization
JOURNAL J Cell Sci 134 (16) (2021)
PUBMED 34328181
REMARK GeneRIF: Distinct temporal expression of the GW182 paralog TNRC6A
in neurons regulates dendritic arborization.
REFERENCE 2 (bases 1 to 8419)
AUTHORS Huntzinger E, Kuzuoglu-Ozturk D, Braun JE, Eulalio A, Wohlbold L
and Izaurralde E.
TITLE The interactions of GW182 proteins with PABP and deadenylases are
required for both translational repression and degradation of miRNA
targets
JOURNAL Nucleic Acids Res 41 (2), 978-994 (2013)
PUBMED 23172285
REFERENCE 3 (bases 1 to 8419)
AUTHORS Baltz AG, Munschauer M, Schwanhausser B, Vasile A, Murakawa Y,
Schueler M, Youngs N, Penfold-Brown D, Drew K, Milek M, Wyler E,
Bonneau R, Selbach M, Dieterich C and Landthaler M.
TITLE The mRNA-bound proteome and its global occupancy profile on
protein-coding transcripts
JOURNAL Mol Cell 46 (5), 674-690 (2012)
PUBMED 22681889
REFERENCE 4 (bases 1 to 8419)
AUTHORS James V, Zhang Y, Foxler DE, de Moor CH, Kong YW, Webb TM, Self TJ,
Feng Y, Lagos D, Chu CY, Rana TM, Morley SJ, Longmore GD, Bushell M
and Sharp TV.
TITLE LIM-domain proteins, LIMD1, Ajuba, and WTIP are required for
microRNA-mediated gene silencing
JOURNAL Proc Natl Acad Sci U S A 107 (28), 12499-12504 (2010)
PUBMED 20616046
REFERENCE 5 (bases 1 to 8419)
AUTHORS Ender C and Meister G.
TITLE Argonaute proteins at a glance
JOURNAL J Cell Sci 123 (Pt 11), 1819-1823 (2010)
PUBMED 20484662
REMARK Review article
REFERENCE 6 (bases 1 to 8419)
AUTHORS Wakiyama M, Takimoto K, Ohara O and Yokoyama S.
TITLE Let-7 microRNA-mediated mRNA deadenylation and translational
repression in a mammalian cell-free system
JOURNAL Genes Dev 21 (15), 1857-1862 (2007)
PUBMED 17671087
REMARK Erratum:[Genes Dev. 2007 Oct 1;21(19):2509]
REFERENCE 7 (bases 1 to 8419)
AUTHORS Yang Z, Jakymiw A, Wood MR, Eystathioy T, Rubin RL, Fritzler MJ and
Chan EK.
TITLE GW182 is critical for the stability of GW bodies expressed during
the cell cycle and cell proliferation
JOURNAL J Cell Sci 117 (Pt 23), 5567-5578 (2004)
PUBMED 15494374
COMMENT VALIDATED REFSEQ: This record has undergone validation or
preliminary review. The reference sequence was derived from
JACYVU010000044.1.
On Jun 4, 2021 this sequence version replaced XM_008759748.3.
##Evidence-Data-START##
RNAseq introns :: single sample supports all introns SAMD00132263,
SAMD00132268 [ECO:0000348]
##Evidence-Data-END##
##RefSeq-Attributes-START##
RefSeq Select criteria :: based on conservation
##RefSeq-Attributes-END##
PRIMARY REFSEQ_SPAN PRIMARY_IDENTIFIER PRIMARY_SPAN COMP
1-160 JACYVU010000044.1 4575703-4575862
161-208 JACYVU010000044.1 4576188-4576235
209-296 JACYVU010000044.1 4595627-4595714
297-318 JACYVU010000044.1 4603144-4603165
319-753 JACYVU010000044.1 4612502-4612936
754-3339 JACYVU010000044.1 4619625-4622210
3340-3516 JACYVU010000044.1 4623462-4623638
3517-3692 JACYVU010000044.1 4624384-4624559
3693-3725 JACYVU010000044.1 4625651-4625683
3726-3806 JACYVU010000044.1 4627008-4627088
3807-3858 JACYVU010000044.1 4627896-4627947
3859-4001 JACYVU010000044.1 4630310-4630452
4002-4148 JACYVU010000044.1 4630932-4631078
4149-4286 JACYVU010000044.1 4631237-4631374
4287-4415 JACYVU010000044.1 4631996-4632124
4416-4493 JACYVU010000044.1 4632586-4632663
4494-4701 JACYVU010000044.1 4632869-4633076
4702-4833 JACYVU010000044.1 4634643-4634774
4834-4992 JACYVU010000044.1 4636542-4636700
4993-5133 JACYVU010000044.1 4637172-4637312
5134-5241 JACYVU010000044.1 4638571-4638678
5242-5463 JACYVU010000044.1 4639614-4639835
5464-5534 JACYVU010000044.1 4641134-4641204
5535-5674 JACYVU010000044.1 4641722-4641861
5675-8419 JACYVU010000044.1 4642182-4644926
FEATURES Location/Qualifiers
source 1..8419
/organism="Rattus norvegicus"
/mol_type="mRNA"
/strain="BN"
/db_xref="taxon:10116"
/chromosome="1"
/map="1q36"
gene 1..8419
/gene="Tnrc6a"
/gene_synonym="Tnrc6"
/note="trinucleotide repeat containing adaptor 6A"
/db_xref="GeneID:308971"
/db_xref="RGD:1307268"
exon 1..160
/gene="Tnrc6a"
/gene_synonym="Tnrc6"
/inference="alignment:Splign:2.1.0"
misc_feature 102..104
/gene="Tnrc6a"
/gene_synonym="Tnrc6"
/note="upstream in-frame stop codon"
CDS 156..6050
/gene="Tnrc6a"
/gene_synonym="Tnrc6"
/note="trinucleotide repeat containing 6; trinucleotide
repeat containing 6a"
/codon_start=1
/product="trinucleotide repeat-containing gene 6A protein"
/protein_id="NP_001382086.1"
/db_xref="GeneID:308971"
/db_xref="RGD:1307268"
/translation="
MRELEAKATKDVERNLSRDLVQEEEQLMEEKKRKKDDKKKKEAAQKKATEQKIKVPEQIKPSVSQPQPANSDNGTSTATSTNNNAKRATASNQQPPPPQQQPQQQQQQQQQQQEQQQQQQQQQQQQQQPQALPRYPREVPPRFRHQEHKQLLKRGQHFPVIAANLGSAVKVLNSQSESSAVTNQQPQNNGEVQNSKSQSDINHNTSGSHYENCQRGPVSSTSDCSTSCKNAVNDLLEKEAWPSAPGSDPELASECIDADSASNSESERNITVMASGNTGGEKDGLRNSTGLGPQSKFVVGSSSNNVGHGSSTGPWGFPHGAIISTCQVSVDAPESKPESSNSRMNAWGTVSSSSNGGLNPSTLNSASNHGAWPVLENNGLALKGPVGSGNSGINIQCSTIGQMPNNQSINSKVSGSSTHGTWGSLQETCEPEVSGSQKVSFSGQPQNITTETTGPNNTTNFMTSSLPNSGSVQNNELPTSNPGAWRVSTMNHPQIQAPSVLNGTSLSHLSNGESKTGGSYGTTWGAYGSNYSGDKCAGPNGQANGDTVNATLMQPGINGPMGTNFQVSTNKGGGVWEPGTVNSQSSPWGSGNGANSGGSRRGWGSPAQNTGTSLSSVEWNKLPSNQHSNDSANGNGSKKLTNGWKSTEEDDQGSGTSQTNEQNSVWAKAGGTVESDGSAESTGRLEEKVTGESQSRDRRKIDQHTLLQSIVNRTDLDPRVLSNSGWGQTPIKQNTAWDTETSPRGERKTDNGTEAWGSSATQTFNSGACTDKTSPNSNDTSSVSGWGDPKPTLRWGDSKGSNCQGGWEDDSAATGMIKSNQWGHCKEDKSAWNDSQKNKQGWGDGQKSSQGWSVSASDNWGESSRSNHWGEANKKSSSGGSDSDRSISGWNELGKTSSFTWGNNINPNNSSGWDESSKPNSSQGWGDPPKCNQSLGWGDSSKPVSSPDWNKQQDIVGSWGIPPATSKPPGTGWLGGPIPAPAKEEEPTGWEEPSPESIRRKMEIDDGTSAWGDPSKYNYKNVNMWNKNIPEGSSRSDQQAQMHRLLPAASAISSKETSSGSGWGEPWAEPSTPATTVDNGTSAWGKPIDSGPSWGEPITAASSASTWGSNSVGPQSLSKSGPKSMQDGWCGEDTPLPGSRPTGWEEEEDVEIGMWNSSSSQELNSSLNWPPYTKKMSSKGLSGKKRRRERGMMKGGNKQEDAWINPFVKQFSNISFSRDSPEENVQSNKMDLSGGMLQDKRMEIDKHSLNIGDYNRAVGKGPGSRPQISKESSMERNPYFDKDGIVADESQNMQFMSSQSMKLPPSNNALPNQALGSIAGLGTQNLNSVRQNGNPSMFGVGNTAAQPRGMQQPPAQPLSSSQPNLRAQVPPPLLSPQVPVSLLKYAPNNGGLNPLFGPQQVAMLNQLSQLNQLSQISQLQRLLAQQQRAQSQRSVPSANRQQQDQQGRPLSVQQQMMQQSRQLDPSLLVKQQTPPSQQPLHQPAMKSFLDNVMPHTTPELQKGPSPVNAFSSFPIGLNSNLNVNMDMNSIKEPQSRLRKWTTVDSMSVNTSLDQNSSKHGAISSGFRLEESPFVPYDFMNSSTSPASPPGSIGDGWPRAKSPNGSSSVNWPPEFRPGEPWKGYPNIDPETDPYVTPGSVINSLSINTVREVDHLRDRNSGSSSSLNTTLPSTSAWSSIRASNYNVPLSSTAQSTSARNSDSKLTWSPGSVTNTSLAHELWKVPLPPKNITAPSRPPPGLTGQKPPLSTWDNSPLRVGGGWGNSDARYTPGSSWGESSSGRITNWLVLKNLTPQIDGSTLRTLCMQHGPLITFHLNLPHGNALVRYSSKEEVVKAQKSLHMCVLGNTTILAEFASEEEISRFFAQSQSLTPSPGWQSLGSSQSRLGSLDCSHSFSSRTDLNHWNGAGLSGTNCGDLHGTSLWGTPHYSTSLWGPPSSSDPRGISSPSPINAFLSVDHLGGGGESM"
misc_feature 3387..3770
/gene="Tnrc6a"
/gene_synonym="Tnrc6"
/note="Argonaute hook; Region: Ago_hook; pfam10427"
/db_xref="CDD:431279"
misc_feature 4047..4604
/gene="Tnrc6a"
/gene_synonym="Tnrc6"
/note="M domain of GW182; Region: M_domain; pfam12938"
/db_xref="CDD:432890"
misc_feature 4677..5462
/gene="Tnrc6a"
/gene_synonym="Tnrc6"
/note="TNRC6-PABC binding domain; Region: TNRC6-PABC_bdg;
pfam16608"
/db_xref="CDD:435458"
misc_feature 5484..5759
/gene="Tnrc6a"
/gene_synonym="Tnrc6"
/note="RNA recognition motif (RRM) found in vertebrate
GW182 autoantigen; Region: RRM_TNRC6A; cd12711"
/db_xref="CDD:410110"
exon 161..208
/gene="Tnrc6a"
/gene_synonym="Tnrc6"
/inference="alignment:Splign:2.1.0"
exon 209..296
/gene="Tnrc6a"
/gene_synonym="Tnrc6"
/inference="alignment:Splign:2.1.0"
exon 297..318
/gene="Tnrc6a"
/gene_synonym="Tnrc6"
/inference="alignment:Splign:2.1.0"
exon 319..753
/gene="Tnrc6a"
/gene_synonym="Tnrc6"
/inference="alignment:Splign:2.1.0"
exon 754..3339
/gene="Tnrc6a"
/gene_synonym="Tnrc6"
/inference="alignment:Splign:2.1.0"
exon 3340..3516
/gene="Tnrc6a"
/gene_synonym="Tnrc6"
/inference="alignment:Splign:2.1.0"
exon 3517..3692
/gene="Tnrc6a"
/gene_synonym="Tnrc6"
/inference="alignment:Splign:2.1.0"
exon 3693..3725
/gene="Tnrc6a"
/gene_synonym="Tnrc6"
/inference="alignment:Splign:2.1.0"
exon 3726..3806
/gene="Tnrc6a"
/gene_synonym="Tnrc6"
/inference="alignment:Splign:2.1.0"
exon 3807..3858
/gene="Tnrc6a"
/gene_synonym="Tnrc6"
/inference="alignment:Splign:2.1.0"
exon 3859..4001
/gene="Tnrc6a"
/gene_synonym="Tnrc6"
/inference="alignment:Splign:2.1.0"
exon 4002..4148
/gene="Tnrc6a"
/gene_synonym="Tnrc6"
/inference="alignment:Splign:2.1.0"
exon 4149..4286
/gene="Tnrc6a"
/gene_synonym="Tnrc6"
/inference="alignment:Splign:2.1.0"
exon 4287..4415
/gene="Tnrc6a"
/gene_synonym="Tnrc6"
/inference="alignment:Splign:2.1.0"
exon 4416..4493
/gene="Tnrc6a"
/gene_synonym="Tnrc6"
/inference="alignment:Splign:2.1.0"
exon 4494..4701
/gene="Tnrc6a"
/gene_synonym="Tnrc6"
/inference="alignment:Splign:2.1.0"
exon 4702..4833
/gene="Tnrc6a"
/gene_synonym="Tnrc6"
/inference="alignment:Splign:2.1.0"
exon 4834..4992
/gene="Tnrc6a"
/gene_synonym="Tnrc6"
/inference="alignment:Splign:2.1.0"
exon 4993..5133
/gene="Tnrc6a"
/gene_synonym="Tnrc6"
/inference="alignment:Splign:2.1.0"
exon 5134..5241
/gene="Tnrc6a"
/gene_synonym="Tnrc6"
/inference="alignment:Splign:2.1.0"
exon 5242..5463
/gene="Tnrc6a"
/gene_synonym="Tnrc6"
/inference="alignment:Splign:2.1.0"
exon 5464..5534
/gene="Tnrc6a"
/gene_synonym="Tnrc6"
/inference="alignment:Splign:2.1.0"
exon 5535..5674
/gene="Tnrc6a"
/gene_synonym="Tnrc6"
/inference="alignment:Splign:2.1.0"
exon 5675..8419
/gene="Tnrc6a"
/gene_synonym="Tnrc6"
/inference="alignment:Splign:2.1.0"
ORIGIN
gcggcggcagcggtggcggcggcggcggcggcagcgggacggtgtagaaaatggcgctggtgcagcggctcgggcctgtccccgcggcgctgcggagggcttgaggctcgcgagcctcgttccccgcgccccacgcgctagtgcactttacacacatgagagagttggaagctaaagctaccaaagacgtagagagaaatcttagcagggatttagtgcaagaagaagaacagttgatggaagaaaagaaaaggaaaaaagacgacaagaaaaagaaggaagctgctcaaaagaaggccactgaacaaaaaatcaaagtgccagaacagataaagcctagtgtaagccagcctcagcctgccaactccgataacggcacttccacagctaccagcactaataataatgccaagcgagctacagccagcaatcagcagccgccgccgccgcagcagcagccgcagcagcagcagcagcagcagcagcaacaacaagagcagcagcagcagcagcagcagcagcagcagcagcagcagcagccacaagccttgcctcggtatcctcgtgaagtacctccacgatttcgccaccaggaacacaaacagcttctaaagaggggtcagcattttccagtcatagcagcaaacttgggatctgctgttaaggtgttaaacagccaatcagaaagcagtgctgtaacaaatcaacagccacaaaataacggagaggtgcagaacagcaaaagccagtcagatataaatcataatacttcaggatcccattatgaaaattgccagcggggacctgtgtcttctacaagtgactgtagcacaagctgtaagaatgctgtaaacgacttgttggaaaaagaagcatggccctcagcccctggcagtgatcctgagttggcttcagaatgtatagatgctgattctgcctccaattctgagtcagagagaaacatcactgtcatggcttcagggaacacaggtggtgagaaagatggccttcggaacagcactggactcggtccccaaagcaaatttgtggttggtagcagcagcaataatgtgggtcatggaagtagtactgggccatggggctttccccatggagccataataagcacatgtcaggtctctgtggatgctcctgaaagcaaaccagaaagtagtaacagtagaatgaatgcttggggcactgtaagttcttcatcaaatggagggttaaatccaagcactttgaattcagctagcaaccatggtgcctggccagtattagaaaacaacggacttgccctaaaagggcctgtagggagtgggaattctggcatcaatattcagtgtagtaccataggccagatgcctaacaatcagagtatcaactctaaagtcagtggctcttctacccatggtacctggggtagccttcaggaaacttgtgagcctgaagtaagtggttcacagaaggtttcattcagtggtcaacctcagaatatcaccactgaaacgactggaccaaataacactactaactttatgacctctagtttaccaaactccggttcagtacaaaataatgaactgcctactagtaatccaggggcctggcgtgtgagcacaatgaatcatcctcagatacaggctccgtcagttctgaatggcacttccctttctcaccttagtaatggagagtcaaaaactggaggctcctacggtactacatggggtgcctatggttctaattactctggcgacaaatgtgcaggccctaatggccaagccaatggtgacactgtgaatgcaactctaatgcagcctggcataaatgggcctatgggcactaactttcaagttagtacaaataaagggggaggtgtatgggagcctgggacagtgaattcccagagttcaccatggggaagtggaaatggtgcaaattctggaggaagtcgaagaggatggggaagtcctgcacagaacactggcactagtctgtccagtgttgagtggaacaaactgcctagcaaccagcattccaatgacagtgcaaatggcaatggtagtaagaaacttacaaatggatggaaatctactgaggaagatgatcagggttctggcacatctcagacgaatgagcaaaacagtgtgtgggccaaagcaggaggcacagtggagagtgatggtagtgcagagagcactggacgccttgaagaaaaagtaaccggggaaagccagagtagagatagaagaaaaattgatcagcacacattactccaaagcattgtaaacagaactgacttagatccacgtgtcctatccaattctgggtggggacagactcctattaagcagaatactgcctgggatacagagacatcaccaagaggggaaagaaagactgacaatgggacagaggcctggggaagctctgcaacacagacttttaactcaggggcatgtacagataagactagccctaatagtaatgatacctcatctgtatcagggtggggtgatcccaaacctactctgaggtggggagattccaaaggctcaaactgccagggggggtgggaagatgattctgctgctacaggaatgatcaagagcaatcagtgggggcattgcaaagaagacaagtctgcatggaatgattcgcaaaagaacaaacaaggctggggcgatggacaaaagtcaagccaaggttggtccgtttctgccagtgataactggggagaatcttccaggagtaaccattggggtgaggctaataagaaatccagctcaggaggcagtgacagcgacaggtccatttctggttggaacgaacttggtaaaactagttcttttacttggggaaataatataaatccaaataactcatcaggatgggatgaatcttctaaacctaactcttcccagggatggggagaccctccaaagtgtaatcagtccctaggttggggagattcatcaaaaccagttagttctccagattggaacaagcaacaagacattgttggatcgtggggaatcccaccagccaccagcaagcctcctggtacaggctggcttgggggacctattcctgctccagcaaaggaggaagaacccacaggctgggaggaaccatccccagagtctatacgacgaaaaatggagatcgatgatggaacttcagcttggggagatccaagcaaatacaactacaaaaatgtgaacatgtggaataaaaacatcccagaaggcagcagccgctcagaccagcaagcacagatgcaccggttgttgccggctgcaagtgccatctcaagcaaggagaccagcagtggctctggctggggtgagccttgggcagagccttctactccagccacgactgtggataatggtacttcagcctggggcaagcccatagacagtggtcccagctggggagaacccattactgcagcatccagtgcatccacgtggggctccaactctgttggtccacaatcattaagcaaatctggacccaaatctatgcaagatggctggtgtggtgaggacacgccattgcctggaagtcgccccactggctgggaagaggaggaggatgtagagattgggatgtggaacagtagctcatctcaagagcttaactcatccttaaactggccaccatataccaagaaaatgtcatccaagggtctgagtggcaaaaaaaggagaagggaaaggggaatgatgaaaggcggaaacaaacaagaggacgcgtggataaacccattcgttaagcagttttcaaatatcagtttttcaagagactcaccagaagaaaatgtacagagcaataagatggatctttctggaggaatgttacaggacaagcggatggagattgataagcatagcctgaatattggtgactacaatcgagcggtcgggaaaggccctgggtctcggcctcagatttccaaagagtcttccatggagcgcaatccttactttgataaggatggcattgtagcagatgaatcccaaaacatgcagtttatgtccagtcaaagcatgaagcttcccccttcaaataatgcactacctaaccaggcccttggctccatagcagggctgggtacgcaaaacttgaattctgttagacagaatggcaatcccagtatgtttggtgttggaaacacagcagcacaaccccggggcatgcagcagcctccagcacaacctctcagttcatctcagcctaatcttcgtgctcaagtgcctcctccattactctcccctcaggttccagtttcattgctgaagtatgcaccaaacaacggtggcctgaatccgctctttggccctcaacaggtagccatgctgaaccagctatcccaactaaaccagctttctcagatctcccagttacagcgattgttagcgcagcagcagagggcacagagtcagagaagcgtgccttctgctaaccgacagcagcaagaccagcagggtcgacctcttagtgtacagcagcagatgatgcaacagtctcgtcagcttgatccaagcctgctggtgaagcagcagactccgccttctcagcagccgctccatcagccagccatgaagtccttccttgacaatgtcatgccccacactacacccgagctacagaaagggccatcgccagtaaacgctttcagcagcttccctataggcttgaactcaaacttgaatgtaaatatggatatgaacagtattaaagagccacagtcacgactaaggaagtggacaacagtggacagcatgtctgtgaacacgtctttggatcaaaactccagcaaacatggtgctatttcaagtggttttaggctggaagagtctccatttgttccctatgactttatgaatagcagtacttcaccagccagtcctccaggttcaataggagatggctggccacgtgccaaatcgcctaacggctctagcagtgttaactggccaccagaatttcgccctggtgaaccatggaaaggttatccaaacattgaccctgaaactgacccttacgtcactcctggcagtgtcataaacagtctttcaattaatactgtgcgggaagttgaccacctcagggacaggaacagtgggtcatcctcatccttgaacaccacgctgccttcaactagtgcctggtcatccattcgtgcctccaactacaatgttcccctcagcagtacagcacaaagcacttcagccagaaatagtgattccaaattgacgtggtctcctggttcagttacaaacacctctctggctcatgagctgtggaaagtccctttaccacctaaaaacatcactgctccgtcccgcccacctccggggctgactggtcagaagccacccttgtctacgtgggataattctccccttcgtgtaggtggaggatggggaaattctgacgccagatataccccaggctccagctggggtgagagcagctcagggagaataaccaattggcttgttctgaagaacctcacacctcagattgacggctccactctgcgcaccctgtgcatgcagcatggcccactgattacattccatctgaacctcccacatggaaatgctctggtccgttacagttcaaaggaagaggtagtgaaggcacaaaagtctctgcacatgtgtgtgctggggaacactactattctcgctgagtttgccagtgaagaggagatcagtcgcttctttgcacaaagtcagtctctgaccccttctcctggctggcagtctctcgggtccagccagagccggctgggctccctcgactgttcccactcattctccagccggactgatctcaatcactggaatggtgctgggctgtcgggaactaactgtggagaccttcacggcacttccctctgggggaccccacattattccacaagcctgtggggtcccccaagcagcagtgacccccggggaattagcagcccatcccccattaatgcttttctttctgttgaccacctgggtgggggtggagagtccatgtaatcgcataggtatagacgtaaactgtgacctcaagaagagaaggaaaggagcactaagttgggctcgccgcctgcagccagggccacctgtgggaacagcttttttctgcacattttccactttgttttccccaaaacatatcagtttgaatacttgaatcatgcaggccaatattataatgtgaaagggtatctatctatttacactcccaaatagcgccatacagctaaccgtgtggaatgagctcactagtgtattcatcatgtgtagccttcagattccttctttccttcatttccatcccccatccccaccttttatttttattttttttttgtttttttgtttttttgttttttttttttttttttaaaaccgttttgggctgatgtatgagcttttacctttgcactgagtgacgttctctccgtctgagcggcagcgtgggggacagctgctccagtgtaaatgtttactcaaggatgttcctaaaggcgtgcgctctctactacgcctcgtgttgcctaccttagtgtggtgtcgtggagttcaagatcaagttgagatactgacgtagggttcttaatgaaagtattgcaccagttttttcatgttgtaaaactaaagaatttcgctctacagtttgagaaactgtggccaccgctgtgacccgcagcccgcctgctgcccaggttgggccctgcactttgaacaggctttccatgttgttttgaaggttcccacggtgaaccttcttgtttacagattttttgtttgttttttgagaaaaaaaatgtttactcttccatcatttaaaaaaaaaaaattaaaagacaaaaaaaaaaaaaaagcggagggtggttaaagacgcttctatctctgggaaaagagcagcattggccatgttcttctgttttctatccccgtcctgaatcaaagagcatggttctcaggaaaccagtccccggtcaaacaatcttgtagtttcttataggaaagaagaaacccaactcttagcactgatactacgtattgctctgttcaagattttctctgccaaaaaaaaagaaaaaaagaaaaaaaaaaaaagaaaagaaaaaccgcgcttcgagctggagttgccgcctgctttcagatgctgtcctttagtagtgggtgatgatggtttgctaatcgctaggtgacttttgtaaccccatcagtggctctcatgtctctgctctcttgtgactgtgttcatgtttaactgttgtaccttaaagccgagatcagtaactatgcatactgtaaccaagacattgggcttacagagttgtttgttgtataaaaattttaaatgttgttgcaaactaacgagttacaccattttaaaatttctttcctccccagcccctgttgttctgcccacaaatggtattataatgcttgcttagtcagagagactaaacaagggtaaagttttaacagtacagagtatgccgtcatttcattgccttgattctaacgtttgtgtcctaagacgcaaaagaggtcagtggcttttaactgtttacaaataggatgtgattgtaagtgtacactttggttgtgtttgaattatgaaatcttcagataataaaccatgactttttggctgctcaacattaattgtctcttttttgtgaatttattcgtaggctcttttataatgaaagttacaaagttgctgcatgtgagaggtcttctcatagagcagcagattaaaaatctaagcaaatatttgaacgttttacctgaacttctccacaatcaccctgagataatgtgagaacagtggaaactgtagcttgctccctcctcccctgagcatctttgggagcttgttgctcaaagctcttctctggcttcaccttccccaccatctgtgcccatctcaagcctcagcgggaccattcggaacacgaagcttactgacttgacagcatcctagcgttaacctctcatacctcacacagtggggatgccaccacctggactggcctctcttccccgtgccctccgcccctcctcgctgcaggagctctgggcgcagaacctgtatgacttcagtcacgctccacttgccaggtgtaagctaatgttggacaccgtaacctaaacaaatgtttaacgcgttcggtgtgtgttgacgtccatactggtttttccaaaaaccaaaggtagctttgaaaaaccatgtgtggagatgtttggaacattaagctgagtgaccgttaggggctttgagtagtatataactgacttcatgacttcgttaattgtattgttaaaagtgtttgggagttttttgcgcttgttatgtggaaataaagtgtttgatttaaaaaata
//
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@meso_cacase at
DBCLS
This page is licensed under a
Creative Commons Attribution 4.0 International License (CC BY 4.0).
If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596.
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