2025-03-02 05:35:48, GGRNA.v2 : RefSeq release 228 (Jan, 2025)
LOCUS NM_001308265 5190 bp mRNA linear ROD 01-OCT-2024 DEFINITION Rattus norvegicus zinc finger E-box binding homeobox 1 (Zeb1), mRNA. ACCESSION NM_001308265 VERSION NM_001308265.3 KEYWORDS RefSeq; RefSeq Select. SOURCE Rattus norvegicus (Norway rat) ORGANISM Rattus norvegicus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus. REFERENCE 1 (bases 1 to 5190) AUTHORS Sun,S., Yan,T., Yang,N., Wu,J. and Liu,Z. TITLE Regulation of osteoclast differentiation and inflammatory signaling by TCF8 in periodontitis JOURNAL Oral Dis 30 (4), 2580-2591 (2024) PUBMED 37246926 REMARK GeneRIF: Regulation of osteoclast differentiation and inflammatory signaling by TCF8 in periodontitis. REFERENCE 2 (bases 1 to 5190) AUTHORS Souza,C.S., Deluque,A.L., Oliveira,B.M., Maciel,A.L.D., Giovanini,C., Boer,P.A., de Paula,F.J.A., Costa,R.S., Franscecato,H.D.C., de Almeida,L.F. and Coimbra,T.M. TITLE Vitamin D deficiency contributes to the diabetic kidney disease progression via increase ZEB1/ZEB2 expressions JOURNAL Nutr Diabetes 13 (1), 9 (2023) PUBMED 37391399 REMARK GeneRIF: Vitamin D deficiency contributes to the diabetic kidney disease progression via increase ZEB1/ZEB2 expressions. Publication Status: Online-Only REFERENCE 3 (bases 1 to 5190) AUTHORS Zhu,X., Yan,F., Liu,L. and Huang,Q. TITLE ZEB1 regulates bone metabolism in osteoporotic rats through inducing POLDIP2 transcription JOURNAL J Orthop Surg Res 17 (1), 423 (2022) PUBMED 36123704 REMARK GeneRIF: ZEB1 regulates bone metabolism in osteoporotic rats through inducing POLDIP2 transcription. Publication Status: Online-Only REFERENCE 4 (bases 1 to 5190) AUTHORS Chen,Y.Y., Jiang,K.S., Bai,X.H., Liu,M., Lin,S.Y., Xu,T., Wei,J.Y., Li,D., Xiong,Y.C., Xin,W.J. and Li,Z.Y. TITLE ZEB1 Induces Ddr1 Promoter Hypermethylation and Contributes to the Chronic Pain in Spinal Cord in Rats Following Oxaliplatin Treatment JOURNAL Neurochem Res 46 (8), 2181-2191 (2021) PUBMED 34032956 REMARK GeneRIF: ZEB1 Induces Ddr1 Promoter Hypermethylation and Contributes to the Chronic Pain in Spinal Cord in Rats Following Oxaliplatin Treatment. REFERENCE 5 (bases 1 to 5190) AUTHORS Sun,D., Liu,X., Zhu,L. and Zhang,B. TITLE Zinc-finger E-box-binding homeobox 1 alleviates acute kidney injury by activating autophagy and the AMPK/mTOR pathway JOURNAL Mol Med Rep 23 (6) (2021) PUBMED 33846788 REMARK GeneRIF: Zincfinger Eboxbinding homeobox 1 alleviates acute kidney injury by activating autophagy and the AMPK/mTOR pathway. REFERENCE 6 (bases 1 to 5190) AUTHORS Gong,S.G. and Eulenberg,R.L. TITLE Palatal development in Twirler mice JOURNAL Cleft Palate Craniofac J 38 (6), 622-628 (2001) PUBMED 11681996 REFERENCE 7 (bases 1 to 5190) AUTHORS Cabanillas,A.M., Smith,G.E. and Darling,D.S. TITLE T3-activation of the rat growth hormone gene is inhibited by a zinc finger/homeodomain protein JOURNAL Mol Cell Endocrinol 181 (1-2), 131-137 (2001) PUBMED 11476947 REFERENCE 8 (bases 1 to 5190) AUTHORS Takagi,T., Moribe,H., Kondoh,H. and Higashi,Y. TITLE DeltaEF1, a zinc finger and homeodomain transcription factor, is required for skeleton patterning in multiple lineages JOURNAL Development 125 (1), 21-31 (1998) PUBMED 9389660 REFERENCE 9 (bases 1 to 5190) AUTHORS Higashi,Y., Moribe,H., Takagi,T., Sekido,R., Kawakami,K., Kikutani,H. and Kondoh,H. TITLE Impairment of T cell development in deltaEF1 mutant mice JOURNAL J Exp Med 185 (8), 1467-1479 (1997) PUBMED 9126927 REFERENCE 10 (bases 1 to 5190) AUTHORS Cabanillas,A.M. and Darling,D.S. TITLE Alternative splicing gives rise to two isoforms of Zfhep, a zinc finger/homeodomain protein that binds T3-response elements JOURNAL DNA Cell Biol 15 (8), 643-651 (1996) PUBMED 8769566 COMMENT VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JAXUCZ010000017.1. On Apr 3, 2024 this sequence version replaced NM_001308265.2. Sequence Note: This RefSeq record was created from transcript and genomic sequence data to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on transcript alignments. Publication Note: This RefSeq record includes a subset of the publications that are available for this gene. Please see the Gene record to access additional publications. ##Evidence-Data-START## Transcript exon combination :: U51583.1, SRR26643296.36810.1 [ECO:0000332] RNAseq introns :: mixed sample support SAMEA5760389, SAMN12840106 [ECO:0006172] ##Evidence-Data-END## ##RefSeq-Attributes-START## RefSeq Select criteria :: based on conservation, expression, longest protein ##RefSeq-Attributes-END## COMPLETENESS: complete on the 3' end. PRIMARY REFSEQ_SPAN PRIMARY_IDENTIFIER PRIMARY_SPAN COMP 1-81 JAXUCZ010000017.1 56810573-56810653 c 82-282 JAXUCZ010000017.1 56702472-56702672 c 283-444 JAXUCZ010000017.1 56661355-56661516 c 445-647 JAXUCZ010000017.1 56658424-56658626 c 648-753 JAXUCZ010000017.1 56656453-56656558 c 754-2558 JAXUCZ010000017.1 56650728-56652532 c 2559-2736 JAXUCZ010000017.1 56648490-56648667 c 2737-5190 JAXUCZ010000017.1 56644397-56646850 c FEATURES Location/Qualifiers source 1..5190 /organism="Rattus norvegicus" /mol_type="mRNA" /strain="BN" /db_xref="taxon:10116" /chromosome="17" /map="17q12.1" gene 1..5190 /gene="Zeb1" /gene_synonym="deltaEF1; Tcf8; Zfhx1a" /note="zinc finger E-box binding homeobox 1" /db_xref="GeneID:25705" /db_xref="RGD:3831" exon 1..81 /gene="Zeb1" /gene_synonym="deltaEF1; Tcf8; Zfhx1a" /inference="alignment:Splign:2.1.0" CDS 24..3353 /gene="Zeb1" /gene_synonym="deltaEF1; Tcf8; Zfhx1a" /note="zfhep; zinc finger homeodomain enhancer-binding protein; TCF-8; transcription factor 8 (represses interleukin 2 expression)" /codon_start=1 /product="zinc finger E-box-binding homeobox 1" /protein_id="NP_001295194.1" /db_xref="GeneID:25705" /db_xref="RGD:3831" /translation="
MADGPRCKRRKQANPRRNNVTNYNTVVEANSDSDDEDKLHIVEEESVTDAADCEGGVPDDELPTDQTVLPGGSDRAGSAKNCWQDDVKDDECDSDAENEQNHDPNVEEFLQQQDTAVIYPEAPEEDQRQGTPEASGHDDNGTPDAFSQLLTCPYCDRGYKRFTSLKEHIKYRHEKNEDNFSCSLCSYTFAYRTQLERHMTSHKSGREQRHVTQSGGNRKFKCTECGKAFKYKHHLKEHLRIHSGEKPYECPNCKKRFSHSGSYSSHISSKKCISLMPVNGRPRSGLKTSQCSSPSLSTSPGSPTRPQIRQKIENKPLQEPLSVNQIKTEPVDYEFKPIVVASGINCSTPLQNGVFSGGGQLQATSSPQGVVQAVVLPTVGLVSPISINLSDIQNVLKVAVDGNIIRQVLENNQASLASKEQEAVSASSIQQGGHSVISAISLPLVDQDGTTKIIINYSLEQPGQLQVVPQNLKKENPAPPKSCKSEKSPEDLTVKSEKDKSFDGAADESTCLLCEDCPGDLNALPELKHYDPEHPAQPPPPAPATEKPESSASSAGNGDLSPSQPPLKNLLSLLKAYYALNAQPSTEELTKIADSVNLPLDVVKKWFEKMQAGQIPGQSLEPPSPGPGSGNIPAKTEEQPQPVDGNEPQEDSTRGQSPLKMTSSPVLPVGSAINGSRSCTSSPSPLNLSSARNPQGYSCVSEGTQEEPQVEPLDLSLPKQQGELLERSTVSSVYQNSVYSVQEEPLNLSCAKKEPQKDSCVTDSEPVVNVVPPSANPINIAIPTVTAQLPTIVAIADQNSVPCLRALAANKQTILIPQVAYTYSATVSPAMQEPPVKVIQPNGNQDERQDTSSEGVSVEDQNDSDCTPPKKKTRKAENGMYACDLCDKIFQKSSSLLRHKYEHTGKRPHECGICRKAFKHKHHLIEHMRLHSGEKPYQCDKCGKRFSHSGSYSQHMNHRYSYCKRGAEDRDAMEQEDTGPEALPEVLPTELVGARASPSQADSDERESLTREEDEDSEKEEEEEDKEMEELQEDKECENPQEEEEEEEEEEEEEEEEEEEEAEEAEHEAAAAKTGGAVEEEAAQQAGSFQQKASGSESKRLSEEKTNEA"
misc_feature 24..341 /gene="Zeb1" /gene_synonym="deltaEF1; Tcf8; Zfhx1a" /note="propagated from UniProtKB/Swiss-Prot (Q62947.2); Region: Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite" misc_feature 48..>473 /gene="Zeb1" /gene_synonym="deltaEF1; Tcf8; Zfhx1a" /note="GET complex subunit GET2; Region: GET2; pfam08690" /db_xref="CDD:400847" misc_feature 114..116 /gene="Zeb1" /gene_synonym="deltaEF1; Tcf8; Zfhx1a" /note="Phosphoserine. /evidence=ECO:0007744|PubMed:22673903; propagated from UniProtKB/Swiss-Prot (Q62947.2); phosphorylation site" misc_feature 120..122 /gene="Zeb1" /gene_synonym="deltaEF1; Tcf8; Zfhx1a" /note="Phosphoserine. /evidence=ECO:0007744|PubMed:22673903; propagated from UniProtKB/Swiss-Prot (Q62947.2); phosphorylation site" misc_feature 390..452 /gene="Zeb1" /gene_synonym="deltaEF1; Tcf8; Zfhx1a" /note="propagated from UniProtKB/Swiss-Prot (Q62947.2); Region: Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite" misc_feature 477..542 /gene="Zeb1" /gene_synonym="deltaEF1; Tcf8; Zfhx1a" /note="C2H2 Zn finger [structural motif]; Region: C2H2 Zn finger" /db_xref="CDD:275368" misc_feature 561..629 /gene="Zeb1" /gene_synonym="deltaEF1; Tcf8; Zfhx1a" /note="Zinc finger, C2H2 type; Region: zf-C2H2; pfam00096" /db_xref="CDD:395048" misc_feature 567..629 /gene="Zeb1" /gene_synonym="deltaEF1; Tcf8; Zfhx1a" /note="C2H2 Zn finger [structural motif]; Region: C2H2 Zn finger" /db_xref="CDD:275368" misc_feature 681..749 /gene="Zeb1" /gene_synonym="deltaEF1; Tcf8; Zfhx1a" /note="Zinc finger, C2H2 type; Region: zf-C2H2; pfam00096" /db_xref="CDD:395048" misc_feature 687..749 /gene="Zeb1" /gene_synonym="deltaEF1; Tcf8; Zfhx1a" /note="C2H2 Zn finger [structural motif]; Region: C2H2 Zn finger" /db_xref="CDD:275368" misc_feature 723..794 /gene="Zeb1" /gene_synonym="deltaEF1; Tcf8; Zfhx1a" /note="Zinc-finger double domain; Region: zf-H2C2_2; pfam13465" /db_xref="CDD:463886" misc_feature 855..944 /gene="Zeb1" /gene_synonym="deltaEF1; Tcf8; Zfhx1a" /note="propagated from UniProtKB/Swiss-Prot (Q62947.2); Region: Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite" misc_feature 900..902 /gene="Zeb1" /gene_synonym="deltaEF1; Tcf8; Zfhx1a" /note="Phosphoserine. /evidence=ECO:0000250|UniProtKB:Q64318; propagated from UniProtKB/Swiss-Prot (Q62947.2); phosphorylation site" misc_feature 927..929 /gene="Zeb1" /gene_synonym="deltaEF1; Tcf8; Zfhx1a" /note="Phosphoserine. /evidence=ECO:0000250|UniProtKB:P37275; propagated from UniProtKB/Swiss-Prot (Q62947.2); phosphorylation site" misc_feature 1425..1526 /gene="Zeb1" /gene_synonym="deltaEF1; Tcf8; Zfhx1a" /note="propagated from UniProtKB/Swiss-Prot (Q62947.2); Region: Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite" misc_feature 1596..1721 /gene="Zeb1" /gene_synonym="deltaEF1; Tcf8; Zfhx1a" /note="propagated from UniProtKB/Swiss-Prot (Q62947.2); Region: Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite" misc_feature 1701..1844 /gene="Zeb1" /gene_synonym="deltaEF1; Tcf8; Zfhx1a" /note="Region: Homeodomain; pfam00046" /db_xref="CDD:459649" misc_feature 1863..2156 /gene="Zeb1" /gene_synonym="deltaEF1; Tcf8; Zfhx1a" /note="propagated from UniProtKB/Swiss-Prot (Q62947.2); Region: Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite" misc_feature 1992..1994 /gene="Zeb1" /gene_synonym="deltaEF1; Tcf8; Zfhx1a" /note="Phosphoserine. /evidence=ECO:0000250|UniProtKB:P37275; propagated from UniProtKB/Swiss-Prot (Q62947.2); phosphorylation site" misc_feature 2013..2015 /gene="Zeb1" /gene_synonym="deltaEF1; Tcf8; Zfhx1a" /note="Phosphoserine. /evidence=ECO:0000250|UniProtKB:Q64318; propagated from UniProtKB/Swiss-Prot (Q62947.2); phosphorylation site" misc_feature 2034..2036 /gene="Zeb1" /gene_synonym="deltaEF1; Tcf8; Zfhx1a" /note="Phosphoserine. /evidence=ECO:0000250|UniProtKB:Q64318; propagated from UniProtKB/Swiss-Prot (Q62947.2); phosphorylation site" misc_feature 2055..2057 /gene="Zeb1" /gene_synonym="deltaEF1; Tcf8; Zfhx1a" /note="Phosphoserine. /evidence=ECO:0007744|PubMed:22673903; propagated from UniProtKB/Swiss-Prot (Q62947.2); phosphorylation site" misc_feature 2061..2063 /gene="Zeb1" /gene_synonym="deltaEF1; Tcf8; Zfhx1a" /note="Phosphothreonine. /evidence=ECO:0000250|UniProtKB:P37275; propagated from UniProtKB/Swiss-Prot (Q62947.2); phosphorylation site" misc_feature 2067..2069 /gene="Zeb1" /gene_synonym="deltaEF1; Tcf8; Zfhx1a" /note="Phosphoserine. /evidence=ECO:0000250|UniProtKB:Q64318; propagated from UniProtKB/Swiss-Prot (Q62947.2); phosphorylation site" misc_feature 2523..2642 /gene="Zeb1" /gene_synonym="deltaEF1; Tcf8; Zfhx1a" /note="propagated from UniProtKB/Swiss-Prot (Q62947.2); Region: Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite" misc_feature 2670..2732 /gene="Zeb1" /gene_synonym="deltaEF1; Tcf8; Zfhx1a" /note="C2H2 Zn finger [structural motif]; Region: C2H2 Zn finger" /db_xref="CDD:275368" misc_feature order(2685..2687,2691..2693,2697..2699,2703..2708, 2715..2720,2727..2729,2769..2771,2775..2777,2787..2792, 2799..2804,2811..2813,2853..2855,2859..2861,2865..2867, 2871..2876,2883..2888) /gene="Zeb1" /gene_synonym="deltaEF1; Tcf8; Zfhx1a" /note="putative nucleic acid binding site [nucleotide binding]; other site" /db_xref="CDD:275368" misc_feature 2706..2783 /gene="Zeb1" /gene_synonym="deltaEF1; Tcf8; Zfhx1a" /note="Zinc-finger double domain; Region: zf-H2C2_2; pfam13465" /db_xref="CDD:463886" misc_feature 2754..2816 /gene="Zeb1" /gene_synonym="deltaEF1; Tcf8; Zfhx1a" /note="C2H2 Zn finger [structural motif]; Region: C2H2 Zn finger" /db_xref="CDD:275368" misc_feature 2790..2867 /gene="Zeb1" /gene_synonym="deltaEF1; Tcf8; Zfhx1a" /note="Zinc-finger double domain; Region: zf-H2C2_2; pfam13465" /db_xref="CDD:463886" misc_feature 2838..2891 /gene="Zeb1" /gene_synonym="deltaEF1; Tcf8; Zfhx1a" /note="C2H2 Zn finger [structural motif]; Region: C2H2 Zn finger" /db_xref="CDD:275368" misc_feature 2925..3350 /gene="Zeb1" /gene_synonym="deltaEF1; Tcf8; Zfhx1a" /note="propagated from UniProtKB/Swiss-Prot (Q62947.2); Region: Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite" exon 82..282 /gene="Zeb1" /gene_synonym="deltaEF1; Tcf8; Zfhx1a" /inference="alignment:Splign:2.1.0" exon 283..444 /gene="Zeb1" /gene_synonym="deltaEF1; Tcf8; Zfhx1a" /inference="alignment:Splign:2.1.0" exon 445..647 /gene="Zeb1" /gene_synonym="deltaEF1; Tcf8; Zfhx1a" /inference="alignment:Splign:2.1.0" exon 648..753 /gene="Zeb1" /gene_synonym="deltaEF1; Tcf8; Zfhx1a" /inference="alignment:Splign:2.1.0" exon 754..2558 /gene="Zeb1" /gene_synonym="deltaEF1; Tcf8; Zfhx1a" /inference="alignment:Splign:2.1.0" exon 2559..2736 /gene="Zeb1" /gene_synonym="deltaEF1; Tcf8; Zfhx1a" /inference="alignment:Splign:2.1.0" exon 2737..5190 /gene="Zeb1" /gene_synonym="deltaEF1; Tcf8; Zfhx1a" /inference="alignment:Splign:2.1.0" ORIGIN
atttagacacaagcgagaggatcatggcggatggccccaggtgtaagcgcagaaagcaggcgaacccgcggcgcaataacgttacaaattataatactgtggtagaagcaaattcagattcggatgatgaagacaaactccatattgtggaagaagaaagtgtcacagatgcagctgactgtgaaggtggtgtgccagatgatgagctgccaacagaccagacagtgttaccaggaggcagtgacagggcgggcagtgccaagaactgctggcaagacgacgtaaaagatgacgaatgcgactcagatgcagaaaacgagcaaaaccatgatcccaacgtggaagagttcctgcagcaacaggacaccgcggtcatctaccctgaggcacccgaggaggaccagcggcagggcacgccagaagccagcggtcatgatgacaatggaacaccagatgcattttcccagttgctcacctgcccgtattgtgatagaggctacaagcgctttacctctttgaaagaacacattaagtaccgccatgagaagaatgaagacaacttcagctgctccctgtgcagttacacctttgcatacagaacccagcttgaacgtcatatgacatcacataagtcaggaagagagcaaagacatgtgacacagtctggaggtaaccgtaagttcaagtgcaccgagtgtgggaaagcgttcaagtacaaacaccatctgaaggagcacttacggatccacagtggagagaagccatatgaatgcccaaactgcaagaaacgtttttcccattctggctcttatagctcacacataagcagtaagaagtgtattagcttgatgcctgtgaatggtaggcccagatcaggactcaagacatctcagtgttcctcgccatctctttcaacatcaccaggcagtcccacacgcccacagatacggcagaagatagagaataaaccccttcaagaaccgctttctgtaaaccaaatcaaaactgaacctgtggattatgagttcaaacccatagtggttgcttcaggaatcaactgttcaacccctttacaaaatggggtttttagcggtggtggccaattgcaggcaaccagttctcctcagggtgtggtgcaagctgttgttctgccaacagttggtttggtatctcccataagtatcaacttaagtgacattcagaatgtacttaaagtggctgtagatggtaacataatacgacaggttttggagaataatcaagccagtcttgcatccaaagagcaagaagccgtgagtgcttcatccatccagcagggcggccattctgtcatttctgccatcagtcttcctttagttgatcaggatggcacaaccaaaatcatcatcaactacagtcttgagcagcccggccaacttcaggttgttccccagaatctaaagaaagaaaacccagcccctccaaagagctgcaaaagtgagaagtcaccagaagatcttactgtcaagtcagagaaggacaaaagctttgatggggctgcggatgagagcacttgccttttgtgtgaggactgcccaggagacctcaatgcacttccagaactaaagcactatgacccagagcaccctgctcaacctccaccccctgccccagccaccgagaagccagagtcctctgcttcatcagccggcaatggagatttgtctcccagtcagccacctttaaagaaccttctgtcgctcttaaaagcctactatgctctgaatgcacagccaagcacagaagagctcaccaagattgccgattctgtgaacctgccgctggatgtagttaaaaagtggtttgaaaagatgcaagctggacagattcccgggcagtctcttgaaccaccttctccaggaccggggtcaggaaacatccctgcaaaaactgaggagcagcctcaacctgtggatggaaatgagccccaggaagacagcacacgtggacagagtcctctcaagatgacaagctctccagttttaccagtaggatcagccattaacggttccagaagttgcacatcatccccatcccctctaaacctttcctcagccaggaacccgcagggttactcttgtgtgtcagagggtacccaggaggagccccaagtagaacctcttgatctctcactaccaaagcaacagggagagttactggaaaggtcgacagtcagtagcgtttaccagaacagtgtttattctgtccaggaagaacccttgaacttgtcttgtgcaaaaaaggagccacaaaaggacagttgtgttacagactcagaaccagttgtaaatgtagtcccaccaagtgccaaccccataaacattgctattcctacagtcactgcccagttacccacaatcgtggccatcgctgaccagaacagtgttccgtgcttacgggcactcgctgccaacaagcagactattctgattccccaagtggcatatacatactccgctacagtcagcccagccatgcaggagccaccagtgaaggtgatccagccaaatggaaaccaggatgaaagacaagacactagctcagaaggagtctccgtggaggaccagaatgactctgactgcacgccacccaaaaagaaaactcggaaggcagagaatgggatgtacgcatgtgacctgtgtgacaagatatttcagaagagcagctccctgctgagacacaaatatgagcatacaggtaagaggccccacgagtgcggaatctgtagaaaggcatttaaacacaagcatcatttgattgagcacatgcgactgcactctggggaaaagccctaccaatgtgacaagtgtggcaagcgcttctcacactcggggtcttactctcaacacatgaatcaccgctactcctactgcaagagaggagctgaagacagagatgccatggagcaggaagacactgggccggaagccctgccggaagtcctgcccactgagcttgttggtgcccgggcatctccctcacaggctgactcggacgagagagaaagtttgacaagggaagaggatgaagacagtgaaaaggaggaggaggaggaggataaagagatggaagaattgcaggaagacaaggaatgtgagaacccacaggaggaggaggaggaggaagaggaggaagaagaagaggaggaggaggaagaggaagaggaggcagaggaagctgagcatgaggcggcagcagccaagactgggggtgcagtggaggaggaagcggctcagcaggcaggcagcttccagcagaaggccagcgggagcgagagcaagcgactgtctgaagagaagacaaatgaagcctaggagctcttccaaaaggaagtcctgcttggtaatgaaatttgctctatattacccacgcttttcatggaaacatggctcctgtgctatggttcctgctcactactgtgtaatgtcagaactgaaaaacaaaatactaaaaaaaaaaaaaaaaaaaaaaaaaaaaatccgggtgtgcctgaacctcaaacctagtaatttttcatgcagttttcaaagttaggaacaagtttgtaacatgaagcagattagaaaacaaaggtttctcagcaggttacaggaagctcgatgggcatctggcttggctggcagtattatcactcttacgttgttcattctaagctgtacaatgggagaaattttataattttttattggtaaacatatgctaaatccacttcagtattttattatgttttttttaaatgtgagaacttctgcactacagaattcccttcaccgagcagtagaaagcagttcagaccgtgctggctacctgctgccaccccaccagtcaggaggtaggacctctgaccttagatgccatgctgccatctaacgtgcatcgctagccttaaggaagcagagagaggagcgggagtttcttactcgtgtgatcttaaatggagttcaaaggttgtccttgagttctgactgcagggacggccagtgttgatgtggcgaggacggcagaggcggcagaatcagtgttcgtgattgtgtttgcgtacgtgacagcaactatgaaggatctataggaagcgctgtgtccctttggccttaagcaagacctatgtgctgtaagtgccattgtcagtgtttcaaggctgtaacagccttcactcagtgtgtggcctacaataactagcatttgttgatttgtttgttgtgtcaaaattcccaaataaaactcaaaccactgactctgtcagagaagctgaagcactgggacatttcacacttctgttcctcagtattcatgttacgttgattgactcagaaatctctacagaaataaaagggaaattctccaactacttagtccatgtacttgcgtgtcagacatggataagccattggttcttggctcacagccatttccaaatgttagttattacggacccaggtgatgaacagcagctgatttttacctaccagtattattttatttcttttagtttgtagatctgtgcaacatttttgtactgtacgtcttcaagcctggcagtattaatacccttcttactgacacgtacttttagttttagaaaacttttatatttatgtgtcttatttttatatttctttatttattacacagtgtagtgtataatactgtagtttgtattaatacaataatatattttagtatgaaattttggaaagttgataagatttaaagtagagatgcaattggttctcgtgcattgagatttgatttaacagtgttctgttaacatttatactcgcctcggactgtagaacagagtttaaatgggaatgtattagttttacaactacaatcaagtcattctccctttacccagtttttaatatgaaactcttacactttgaaactcactgtgtgtgactcatagcatgctgctcttctgttaagagttagcccagccataactcattcccttagcaagccaaattagaattgccttctgtaaacagtgttgggaacaatgtttaacatggtgtgccaatttgttcctgtatccatgtatgtaagctaccaatccgactcttccttttaagttccttgttacaccatggtcattttctagttttttaccagactcccagctcacaataaacgcatcaacaagcctga
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Creative Commons Attribution 4.0 International License (CC BY 4.0).
If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596.
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