LOCUS       NM_001105760            1596 bp    mRNA    linear   ROD 19-SEP-2024
DEFINITION  Rattus norvegicus protein prenyltransferase alpha subunit repeat
            containing 1 (Ptar1), mRNA.
ACCESSION   NM_001105760 XM_001079960 XM_001079969 XM_239074
VERSION     NM_001105760.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 1596)
  AUTHORS   Morgenstern,M., Peikert,C.D., Lubbert,P., Suppanz,I., Klemm,C.,
            Alka,O., Steiert,C., Naumenko,N., Schendzielorz,A., Melchionda,L.,
            Muhlhauser,W.W.D., Knapp,B., Busch,J.D., Stiller,S.B.,
            Dannenmaier,S., Lindau,C., Licheva,M., Eickhorst,C., Galbusera,R.,
            Zerbes,R.M., Ryan,M.T., Kraft,C., Kozjak-Pavlovic,V., Drepper,F.,
            Dennerlein,S., Oeljeklaus,S., Pfanner,N., Wiedemann,N. and
            Warscheid,B.
  TITLE     Quantitative high-confidence human mitochondrial proteome and its
            dynamics in cellular context
  JOURNAL   Cell Metab 33 (12), 2464-2483 (2021)
   PUBMED   34800366
REFERENCE   2  (bases 1 to 1596)
  AUTHORS   Gaudet,P., Livstone,M.S., Lewis,S.E. and Thomas,P.D.
  TITLE     Phylogenetic-based propagation of functional annotations within the
            Gene Ontology consortium
  JOURNAL   Brief Bioinform 12 (5), 449-462 (2011)
   PUBMED   21873635
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from CH473953.1.
            
            On Jan 12, 2008 this sequence version replaced NM_001105760.1.
            
            ##Evidence-Data-START##
            RNAseq introns :: single sample supports all introns SAMD00132261,
                              SAMD00132263 [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1596
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="1"
                     /map="1q51"
     gene            1..1596
                     /gene="Ptar1"
                     /note="protein prenyltransferase alpha subunit repeat
                     containing 1"
                     /db_xref="GeneID:286972"
                     /db_xref="RGD:708369"
     exon            1..97
                     /gene="Ptar1"
                     /inference="alignment:Splign:2.1.0"
     CDS             12..1289
                     /gene="Ptar1"
                     /note="GABAC receptor subunit (Rho2)"
                     /codon_start=1
                     /product="protein prenyltransferase alpha subunit
                     repeat-containing protein 1"
                     /protein_id="NP_001099230.2"
                     /db_xref="GeneID:286972"
                     /db_xref="RGD:708369"
                     /translation="

MAETNEEVAVLVQRVVKDITNAFRRNPHIDEIGLIPCPEARYNRSPIVLVENKLGVESWCVKFLLPYVHNKLLLYRTRKQWLHKDELIDVTCTLLLLNPDFTTAWNVRKELILSGTLSPVKDLHLGKLALTKFPKSPETWIHRRWVLQQLSQETSLPSSVAKGSLGVVPAERTQRIIQEEMEVCSEAAGRYPSNYNAWSHRIWVLQNVAKLDLKILLDELSSTKHWASVHVSDHSGFHYRQFLLKSLISQTTTDNAVPQHNSLKCEPKEAAAAAASAEEPSVSLPQLLEEEVEFCTDLIDSYPGHETLWCHRRHVFYLQHHLNGRLPPSLTPLSPADCSGAALNDLHQIPTSPQLSQAMEVDGLSDSSKQGYSQETKRLKRTPAPDSLGLEMEHKFIDQVLSTCRNVEQARYANAYRKWLVTLSQ"

     misc_feature    255..1049
                     /gene="Ptar1"
                     /note="farnesyltranstransferase; Region: PLN02789"
                     /db_xref="CDD:215423"
     exon            98..267
                     /gene="Ptar1"
                     /inference="alignment:Splign:2.1.0"
     exon            268..334
                     /gene="Ptar1"
                     /inference="alignment:Splign:2.1.0"
     exon            335..439
                     /gene="Ptar1"
                     /inference="alignment:Splign:2.1.0"
     exon            440..653
                     /gene="Ptar1"
                     /inference="alignment:Splign:2.1.0"
     exon            654..946
                     /gene="Ptar1"
                     /inference="alignment:Splign:2.1.0"
     exon            947..1596
                     /gene="Ptar1"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      

cggccgccaacatggccgagacgaacgaggaggtggcggtactggtgcaaagggtggtgaaggacatcactaacgccttccgcaggaacccgcacatagatgaaattggtctgatcccatgtcccgaagcaagatataaccggagtcccattgtcctggttgagaacaaactcggcgtggagagctggtgtgtcaagttcttattaccatatgtccacaataaactccttctgtacagaacaagaaagcagtggctacacaaagatgaactgatagatgtcacctgcactctgctgctgctcaacccagacttcaccactgcatggaatgtgaggaaagagctcatcctctctggcactttaagtccagttaaggatctacatctgggaaaactggccttaactaagtttcctaagagtccagagacatggattcacaggcgctgggtgctacagcagctaagtcaggaaacgtccctgccttcctctgtggccaaaggaagcttaggtgtagttcctgcagaaaggacacagcggataatacaggaagagatggaagtctgcagtgaagcagcagggagatatcccagcaactataatgcctggtcccatcgcatctgggtgttacagaacgtggccaagctggatctgaagatccttcttgatgaactatcttctactaaacactgggcgtccgtgcatgtctcagaccacagtggatttcactatcgccagttcttgctaaagtccttgattagccagacaacgacagacaatgctgtaccgcagcacaactctttgaaatgtgagccgaaagaagcagcagcagcagcagcctcagcagaggagcccagtgtgagtcttccccagctcctagaagaagaggtggaattctgcacagatcttattgattcctatccagggcatgaaaccctttggtgtcacaggcggcacgttttctaccttcaacatcacttaaatggcaggctccctccaagcttgactcccctgtcacccgcagactgctctggggcagctttgaatgacttgcaccagattccaaccagccctcagctatctcaggcaatggaagtagacggactgagtgactcaagcaagcaaggctattcccaggaaaccaagcgcctaaagcggaccccagctccagactccctaggcctggagatggagcacaagtttattgatcaagtgttgtctacttgtcggaatgtagagcaagccaggtatgccaatgcatacaggaaatggctggtgactttgagtcagtgacaggggtggattcagcctaggaaattccttttagtgcaatattgcttttctttctcaacgctatagttgcatgaactaactggctaactgtatttttcatctacagcttaaaagtctataaggaaccttttgttttatttattttgtcaagagccggcattcctttgggtataatcgtgtagttccttcctgctaaacagtgtcttaattcttttttttttcctctttggtccatggctttctccgtccatacttgggcttctcgtttggctcttgtgattggctcccatacttattcaccgcagtt

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