2024-04-19 16:28:36, GGRNA.v2 : RefSeq release 222 (Jan, 2024)
LOCUS NM_001044295 1272 bp mRNA linear ROD 22-MAR-2023 DEFINITION Rattus norvegicus TPD52 like 1 (Tpd52l1), mRNA. ACCESSION NM_001044295 XM_001070150 VERSION NM_001044295.1 KEYWORDS RefSeq; RefSeq Select. SOURCE Rattus norvegicus (Norway rat) ORGANISM Rattus norvegicus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus. REFERENCE 1 (bases 1 to 1272) AUTHORS Boutros R and Byrne JA. TITLE D53 (TPD52L1) is a cell cycle-regulated protein maximally expressed at the G2-M transition in breast cancer cells JOURNAL Exp Cell Res 310 (1), 152-165 (2005) PUBMED 16112108 REFERENCE 2 (bases 1 to 1272) AUTHORS Cho S, Ko HM, Kim JM, Lee JA, Park JE, Jang MS, Park SG, Lee DH, Ryu SE and Park BC. TITLE Positive regulation of apoptosis signal-regulating kinase 1 by hD53L1 JOURNAL J Biol Chem 279 (16), 16050-16056 (2004) PUBMED 14761963 REFERENCE 3 (bases 1 to 1272) AUTHORS Boutros R, Bailey AM, Wilson SH and Byrne JA. TITLE Alternative splicing as a mechanism for regulating 14-3-3 binding: interactions between hD53 (TPD52L1) and 14-3-3 proteins JOURNAL J Mol Biol 332 (3), 675-687 (2003) PUBMED 12963375 REFERENCE 4 (bases 1 to 1272) AUTHORS Byrne JA, Nourse CR, Basset P and Gunning P. TITLE Identification of homo- and heteromeric interactions between members of the breast carcinoma-associated D52 protein family using the yeast two-hybrid system JOURNAL Oncogene 16 (7), 873-881 (1998) PUBMED 9484778 COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC099809.1. On Aug 24, 2006 this sequence version replaced XM_001070150.1. ##Evidence-Data-START## Transcript exon combination :: BC099809.1, CA338998.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA5760383, SAMEA5760384 [ECO:0000348] ##Evidence-Data-END## ##RefSeq-Attributes-START## RefSeq Select criteria :: based on conservation ##RefSeq-Attributes-END## FEATURES Location/Qualifiers source 1..1272 /organism="Rattus norvegicus" /mol_type="mRNA" /db_xref="taxon:10116" /chromosome="1" /map="1p11" gene 1..1272 /gene="Tpd52l1" /note="TPD52 like 1" /db_xref="GeneID:689256" /db_xref="RGD:1594796" exon 1..122 /gene="Tpd52l1" /inference="alignment:Splign:2.1.0" CDS 104..595 /gene="Tpd52l1" /note="tumor protein D52-like 1" /codon_start=1 /product="tumor protein D53" /protein_id="NP_001037760.1" /db_xref="GeneID:689256" /db_xref="RGD:1594796" /translation="
MEAQAQGLLETEPLQGRDGDAIGSADLSSMLSEEEKDELKAELVQLEEEITTLRQVLSAKERHLVEIKQKLGMNLMNELKQNFSRSWHDMQTTTAYKKTHETLSHAGQKATAAFSNVGTAISRKFGDMRYSIRHSISMPAMRNSPTFKSFEERVETTVTSLKV"
misc_feature 194..556 /gene="Tpd52l1" /note="tumor protein D52 family; Region: TPD52; pfam04201" /db_xref="CDD:427780" exon 123..238 /gene="Tpd52l1" /inference="alignment:Splign:2.1.0" exon 239..387 /gene="Tpd52l1" /inference="alignment:Splign:2.1.0" exon 388..489 /gene="Tpd52l1" /inference="alignment:Splign:2.1.0" exon 490..528 /gene="Tpd52l1" /inference="alignment:Splign:2.1.0" exon 529..589 /gene="Tpd52l1" /inference="alignment:Splign:2.1.0" exon 590..606 /gene="Tpd52l1" /inference="alignment:Splign:2.1.0" exon 607..1226 /gene="Tpd52l1" /inference="alignment:Splign:2.1.0" ORIGIN
ggcggcgtggctggcagtcttccgagctcgggcaccgctaccatctgctgctctgcgaggagtccgtggattccccgccgcgctcagctccacgccggccaccatggaggcgcaggcacaaggcttgttggagacggagccacttcaaggaagagatggggacgcaataggcagtgctgacctctctagcatgctttctgaggaggagaaggacgagctaaaggcagagttagttcagctagaagaggaaatcacaacattacgacaagttttgtcagcaaaagaaagacatctggttgagatcaaacagaaactcggcatgaacctgatgaacgagttaaagcagaacttcagcaggagctggcacgacatgcagaccacgactgcgtacaaaaaaacacacgaaaccctgagccacgcagggcagaaggcaacagcagctttcagtaatgtgggaactgccatcagcaggaagtttggcgatatgaggtactccatccgccattccataagtatgcctgccatgaggaattctcctactttcaaatcatttgaggagagggttgagacaactgttacaagcctcaaggtgtaaatgttttgcctacgaaagtaggtgggacaaaccacagtggtggcagttttgaggaggtcctgagctccacagcacacgccagctcccagaatgcttcagcaggcatccggcagaccagagaagaggatctgcagtgctaggcccagcctgggctgctgccggtcagtttgcctgctcatcccgttatgaagaccaaaatcccaccgggaaccccaagttttgacattgttatttaaatggggtctccaaaaagtttaatgaaatgatttctcttcgcacttgtgttgacgatggaccagtcgaccattactctggagtgtttacaaatgtcacctttaaaataggcaacctggagcacggtcctaactggtcctattcttgtctgtgtaactcaatgtatttcccaaacatgcagctactaattattagctttgcttttggctcagtctccataccactatgcatgtctgggagtgctgaggcctgtcagtgtgcagagccacaggggcactatttgatgactgtcgcctccagctggccaagtcactccaaacttcaccaaattgcttgtgatctctcacctacatcaatgtacatctatttaagtcattaaaataattcactatagcgaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaa
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Creative Commons Attribution 4.0 International License (CC BY 4.0).
If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596.
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