LOCUS       XM_026022032             651 bp    mRNA    linear   PLN 07-AUG-2018
DEFINITION  PREDICTED: Oryza sativa Japonica Group auxin-binding protein 4
            (LOC107277066), mRNA.
ACCESSION   XM_026022032
VERSION     XM_026022032.1
DBLINK      BioProject: PRJNA122
KEYWORDS    RefSeq.
SOURCE      Oryza sativa Japonica Group (Japanese rice)
  ORGANISM  Oryza sativa Japonica Group
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP
            clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_029267.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Oryza sativa Japonica Group
                                           Annotation Release 102
            Annotation Version          :: 102
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.1
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..651
                     /organism="Oryza sativa Japonica Group"
                     /mol_type="mRNA"
                     /cultivar="Nipponbare"
                     /db_xref="taxon:39947"
                     /chromosome="12"
     gene            1..651
                     /gene="LOC107277066"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Gnomon. Supporting evidence
                     includes similarity to: 12 Proteins, and 80% coverage of
                     the annotated genomic feature by RNAseq alignments"
                     /db_xref="GeneID:107277066"
     CDS             160..651
                     /gene="LOC107277066"
                     /codon_start=1
                     /product="auxin-binding protein 4"
                     /protein_id="XP_025877817.1"
                     /db_xref="GeneID:107277066"
                     /translation="

MCHQSWLERVLTVSGVCSDNSVVKDIRQMPQGTLAHGMKEVEVCLQTFGPGQRTPIHRHSCEEVFVVLKGKGTLFLGSSSMKYPGQPQEIPVFQNSTFTIPVNDPHQVWNSDEHEDLQVIVVISRPPIKVFFYDDWNMPHTAAKLQFPIFWDEECLIAPKDEL"

     misc_feature    220..627
                     /gene="LOC107277066"
                     /note="auxin-binding protein 1, cupin domain; Region:
                     cupin_ABP1; cd02220"
                     /db_xref="CDD:380349"
     misc_feature    order(223..237,271..282,286..288,343..345,349..351,
                     355..357,379..381,385..387,427..429,433..438,442..456,
                     517..519,523..525,529..534)
                     /gene="LOC107277066"
                     /note="homodimer interface [polypeptide binding]; other
                     site"
                     /db_xref="CDD:380349"
     misc_feature    order(289..291,295..297,319..324,328..330,334..336,
                     346..348,352..354,475..477,610..612)
                     /gene="LOC107277066"
                     /note="active site"
                     /db_xref="CDD:380349"
ORIGIN      

gaattctgatgtgaagtgaacttttcttctgaattctgatgcgaacggaggtaattctgatgtgaacggaggaaatcgcatggaccaaccatagaagcagattccagctgctcagccgcttccctcccctcctgccagcgagttccagcaagtctgcagatgtgccaccaatcttggcttgagcgagtgctaactgtatctggtgtatgttcagacaattcagtggtgaaagacattagacaaatgccccaaggcacgctagctcatggaatgaaggaggtggaagtgtgccttcagacatttggtccaggccaaaggacacccatccacaggcactcatgtgaggaagtttttgttgtgttgaaagggaaaggcacactctttctgggatcaagctcaatgaagtaccctggccagcctcaggagatccctgtctttcagaacagcacatttactatccctgtaaatgatcctcaccaggtttggaattctgatgagcatgaggatttgcaggttattgtggtcatatcgcgcccgcctatcaaagtgtttttctacgatgactggaatatgcctcacacggctgcaaaactgcagttccccatcttctgggacgaggaatgcttaattgcacctaaagatgaactctag

//