LOCUS       XM_026020800            4055 bp    mRNA    linear   PLN 07-AUG-2018
DEFINITION  PREDICTED: Oryza sativa Japonica Group pentatricopeptide
            repeat-containing protein At1g03100, mitochondrial (LOC9269715),
            transcript variant X5, mRNA.
ACCESSION   XM_026020800
VERSION     XM_026020800.1
DBLINK      BioProject: PRJNA122
KEYWORDS    RefSeq.
SOURCE      Oryza sativa Japonica Group (Japanese rice)
  ORGANISM  Oryza sativa Japonica Group
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP
            clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_029265.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Oryza sativa Japonica Group
                                           Annotation Release 102
            Annotation Version          :: 102
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.1
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4055
                     /organism="Oryza sativa Japonica Group"
                     /mol_type="mRNA"
                     /cultivar="Nipponbare"
                     /db_xref="taxon:39947"
                     /chromosome="10"
     gene            1..4055
                     /gene="LOC9269715"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Gnomon. Supporting evidence
                     includes similarity to: 1 mRNA, 2 ESTs, 3 Proteins, and
                     100% coverage of the annotated genomic feature by RNAseq
                     alignments, including 28 samples with support for all
                     annotated introns"
                     /db_xref="GeneID:9269715"
     CDS             120..2435
                     /gene="LOC9269715"
                     /codon_start=1
                     /product="pentatricopeptide repeat-containing protein
                     At1g03100, mitochondrial"
                     /protein_id="XP_025876585.1"
                     /db_xref="GeneID:9269715"
                     /translation="

MLRVGRICSRSSTRAVSSFLVGPRHLIGHESPHFLGSKCCWTNRTGAIGFLNTKLNIGSYGPCLSTLTETILVQAHDPSLLALEIENAIDQQRFDDAWRAYEKHIHMDGVPRKSVLSKLITGFAETCDAHWLNQSYNVVNHAFEEKSKLLEKEPLIFLSLALARSSLPNLSINVVRKLIKMEAYPPVAAWSAIVAHMCQTATGAFLAADMVMEIGYLFQNNRVDPRKKSNRPLLLMKPNSLTFNIILTASLLFGTTKKAEQLLELMPRIGLKPDVSSLIVMARIYEQNGHRDEIQKLRRHVNEACGLSESELRQFYDCLLSCHLKFGDLDSAVDMILDMLKKGKNTKRSLEAAKAVLEAVENNKIYLPYEKTKPVNSGSSNKSVCTDSQMLNYISFFKDKSFARLELDARELLKLLSDKLQEQVGLVKSEYGILYPTETMYAKLVKAFLEANKISALASFLVKASKEDSPVSVESSFVVQVINACISLGWLEQAHDLLDEMRFSGIRVGSTIYSSLLKAYCKEGHHEDDIAALLKDAQQAGIQLDPSCYEDLIQSRAHHNNTTGALNLFKELKSLNILKAGQNEFEMLVQGCNNNGAALTTKLVEEVRSGHPVNHAIHDWNNVIHFFCKKRLMHDAHKALGKMKALGHTPNAQTFHSLVTGYAAVGGKYVEVTDLWGEMKVLATSSSMNFDQELLDSLLYCFVRGGFFLRAMEVIEMMEKGKMFIDKYKYKSLWLKYHRTLYKGKAPKVQTEAQLKRREAALHFKRWIGLT"

     misc_feature    843..926
                     /gene="LOC9269715"
                     /note="PPR repeat [structural motif]; Region: PPR repeat"
                     /db_xref="CDD:276811"
     misc_feature    942..1034
                     /gene="LOC9269715"
                     /note="PPR repeat [structural motif]; Region: PPR repeat"
                     /db_xref="CDD:276811"
     misc_feature    1050..1145
                     /gene="LOC9269715"
                     /note="PPR repeat [structural motif]; Region: PPR repeat"
                     /db_xref="CDD:276811"
     misc_feature    1437..1520
                     /gene="LOC9269715"
                     /note="PPR repeat [structural motif]; Region: PPR repeat"
                     /db_xref="CDD:276811"
     misc_feature    1560..1685
                     /gene="LOC9269715"
                     /note="PPR repeat family; Region: PPR_2; pfam13041"
                     /db_xref="CDD:432946"
     misc_feature    1560..1631
                     /gene="LOC9269715"
                     /note="PPR repeat [structural motif]; Region: PPR repeat"
                     /db_xref="CDD:276811"
     misc_feature    <1584..>1946
                     /gene="LOC9269715"
                     /note="maturation of RBCL 1; Provisional; Region:
                     PLN03218"
                     /db_xref="CDD:215636"
     misc_feature    1647..1739
                     /gene="LOC9269715"
                     /note="PPR repeat [structural motif]; Region: PPR repeat"
                     /db_xref="CDD:276811"
     misc_feature    1755..1841
                     /gene="LOC9269715"
                     /note="PPR repeat [structural motif]; Region: PPR repeat"
                     /db_xref="CDD:276811"
     misc_feature    1977..2108
                     /gene="LOC9269715"
                     /note="PPR repeat family; Region: PPR_2; pfam13041"
                     /db_xref="CDD:432946"
     misc_feature    1977..2057
                     /gene="LOC9269715"
                     /note="PPR repeat [structural motif]; Region: PPR repeat"
                     /db_xref="CDD:276811"
     misc_feature    2073..2177
                     /gene="LOC9269715"
                     /note="PPR repeat [structural motif]; Region: PPR repeat"
                     /db_xref="CDD:276811"
     misc_feature    2193..2279
                     /gene="LOC9269715"
                     /note="PPR repeat [structural motif]; Region: PPR repeat"
                     /db_xref="CDD:276811"
ORIGIN      

gccaccggcgcgtggcagggtgaaggctgcagcctgccggccctcgcttgcccccactgggcgccggccgagcgccaccctgcgcgggcacctagcctgtgcttgccccctactcgcaaatgcttcgtgttgggagaatttgttcaagatcttcaacccgtgctgtttcttcattcctggtgggtccaagacatttgattggtcatgaaagcccacatttcttgggctccaagtgttgttggactaaccggactggtgcaattgggttcctgaacacaaagctaaatattggtagttatggtccatgcttatcaactcttactgaaacaattctggtccaagctcatgacccatccctgctagcattggagatagagaatgcaattgatcagcagaggtttgatgatgcatggagggcttatgagaagcatattcacatggatggagtccccagaaagtctgttttgagtaagctcatcactggcttcgcagagacctgtgatgctcactggctgaaccagtcctacaatgtggttaatcatgcatttgaagagaagagcaaactgttggagaaggagccccttattttcctctctcttgcactcgcacggtcttctcttcctaatctttctataaatgttgtgaggaagttgataaagatggaagcatacccacctgttgcagcatggtcggctatcgtggcgcatatgtgccaaactgcaactggtgcatttcttgctgctgacatggtaatggagattggctaccttttccagaataatagggttgatccacggaagaagagcaaccgtccattgctattaatgaagcccaattcattgaccttcaacataattctgactgcatcccttctgtttggcactacaaaaaaggcggagcagcttcttgaattaatgcctaggatagggttgaagcctgacgtcagctcgttgattgttatggcccggatatatgaacagaatgggcacagagatgagatccagaagctgaggagacatgttaatgaggcctgtggccttagtgaatcagagctcaggcagttttatgattgcttgctctcctgccacttgaaatttggagatctggattctgcagtggatatgatattggatatgcttaaaaagggtaaaaatacgaaacgttcacttgaagcagctaaagcagttcttgaagcagttgaaaacaacaaaatttatcttccttatgagaaaaccaagcctgttaattcaggttcctcgaacaaatctgtatgtactgacagtcaaatgctaaactatatttcattcttcaaagataagagctttgcaaggcttgagttagatgcgagagaattactcaagctattatcagataagcttcaggaacaagttgggctagtaaaatctgaatatggtatcctctatccaactgaaacaatgtatgccaagcttgttaaagcttttctggaagcaaacaagatcagtgcattggcatcatttcttgtgaaagcaagcaaagaggattctcctgtctctgttgaaagctcctttgttgttcaagtgataaatgcatgtatttctcttgggtggttagagcaagcacatgaccttcttgacgagatgagattttctggaattagagttggttctaccatttattcatctctcctaaaggcatattgcaaagagggccatcatgaagatgacatagctgcacttctgaaagacgctcaacaagcaggtattcagcttgatccaagctgctatgaggatttgatacaatccagagcacatcacaataataccacaggtgctctcaatctttttaaagagttgaagagtttgaatattttgaaagctggtcagaatgaatttgagatgttagtacaaggctgcaataacaatggagctgctttgacaactaagctagtggaggaagtcagaagtggccacccggttaatcatgctattcatgactggaataatgttatccatttcttctgcaagaagagattgatgcatgatgctcacaaagcacttggcaagatgaaagctttaggacacacgccaaatgcacagacattccattctttagtaactggttatgctgctgttggtggtaaatatgtagaggtgacagatttgtggggtgaaatgaaagttttggccacctcaagttcaatgaattttgatcaagagctcctggactctctgctgtattgctttgtgagaggcggtttcttccttcgagccatggaagttatagaaatgatggaaaaaggcaagatgtttatagacaaatacaagtacaagtccctgtggcttaaataccacagaacattgtacaaaggtaaggctcctaaagtgcaaacagaagcacaactgaaacggagggaagcagcattgcatttcaagagatggattggattaacatgaaaactacagagcacaggtccttgaaaacactaagcctggtagatagctctgctgcttttgttcactgtatgtcataggagatgttctggtatcagcatggtttgctaccactgtatggatggacaccactgtatggaaacctctgtcacaaagtgacatacatgaaggcagaaggcttcttttccaaatgggcctggtgcatatgaaatatatggtttcttagccacaaacactatgagctcaattggtgaaaggggcgatttgttgataaaggaacaacagaaatgcagagtgaagtttctccatacattagactgattagagcaagtaagagggctataaaaaggctgaatgctgaggtggatgagagagcagaggagagagatgagaagcggggtgtaagtttacagtcggcttaggcgcaggagccaagaaaatctgtgatacagacaggtgggccatatatttatagtgaagagttaaccactatataagtgagttaagagatagactataaagatctatacagtaagcagctagctgtattattatccttgctcttagagaggataaaaccctacagttgcttctcccggctgcttctctctctctccaagcaaaactcccatttccaaaaaaaaaaaaaaaggtgggcttcacttcacaagttcttctccaattccgattccgaagtcctttcaacccaaaaggctgatgtgctggttgccttgtctagggtgctcctgaaatgttctttggctatgggtaccaactgaagctttgttttcgcggcgtcctcttttcatgtagttcaaattgcatttaccatttgatcaaaagcaggtgcattttgatccataattcttcatgacaaagcactacagctaagttggagaaaagaatgcagtatttgtgaagtagcagtaggccttcttgttgaggcaacagcggatatgagctatggatttatttcccttggaaggctgtaagttgaaggatcacaagctaattatcttggttgcgtgacactttcactccattgccttccgatccaatatgtaagatctccttcctttattcccatgctactgatttcttcaagatataaaaaagattaatcacaaggcataaatgccatgcaatgtaattattggtagctattgcaaatcaatatatgaggctatgttgtttgtgcatggccagagaccagaatgaggggctttttgatcctgacctgagggaggtgagatcagttatcagggcagctaggacatgatgctgtgaaaagagcagcagcccccagctcatgagtcatgacagtttgtggcactccccaatcattagcagaagacataatcaattcagaactgcatgcaaaatcagggcaggttagggaatgtggatggtggatccgtggatggatagccccatcgttcttatgcttgtgcttattctcatatggcttattatcaatcaataaatgtaaaacttttatatacatgttcttagcgattcaaaaacaaatgatgtacaaataaactatgatgtaaattaaatattaaaactcaaatattagcttataagtatatgcataagcgaagagatggggttgcttgtttc

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