LOCUS       XM_015794996            1296 bp    mRNA    linear   PLN 07-AUG-2018
DEFINITION  PREDICTED: Oryza sativa Japonica Group probable calcium-binding
            protein CML48 (LOC4346304), mRNA.
ACCESSION   XM_015794996
VERSION     XM_015794996.1
DBLINK      BioProject: PRJNA122
KEYWORDS    RefSeq.
SOURCE      Oryza sativa Japonica Group (Japanese rice)
  ORGANISM  Oryza sativa Japonica Group
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP
            clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_029263.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Oryza sativa Japonica Group
                                           Annotation Release 102
            Annotation Version          :: 102
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.1
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1296
                     /organism="Oryza sativa Japonica Group"
                     /mol_type="mRNA"
                     /cultivar="Nipponbare"
                     /db_xref="taxon:39947"
                     /chromosome="8"
     gene            1..1296
                     /gene="LOC4346304"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Gnomon. Supporting evidence
                     includes similarity to: 3 mRNAs, 56 ESTs, 8 Proteins, and
                     100% coverage of the annotated genomic feature by RNAseq
                     alignments, including 121 samples with support for all
                     annotated introns"
                     /db_xref="GeneID:4346304"
     CDS             234..995
                     /gene="LOC4346304"
                     /codon_start=1
                     /product="probable calcium-binding protein CML48"
                     /protein_id="XP_015650482.1"
                     /db_xref="GeneID:4346304"
                     /translation="

MADYNRYGYGGYGSTPSAPPASSYGYTTTPSAPPASSSSSYGYGHGGGGYPSSTYPPPPPSSSQAYPMGMGGFLVFPPGTHPDVERAFRAVDRDGSGSIDERELQDALSSAYHRFSIRTVRLLLFLFNKPASHSPSRMGPAEFVSLWNCLGQWRGIFDRYDRDGSGKIEKDELREALRSLGYAVPPSVLELLIANYNNGVSSRGALDFDNFVECGMIVKGLTEKFKEKDTRYSGSATLSYDGFLSMVIPFIVP"

     misc_feature    480..983
                     /gene="LOC4346304"
                     /note="Penta-EF hand, calcium binding motifs, found in
                     Group I PEF proteins; Region: EFh_PEF_Group_I; cd16180"
                     /db_xref="CDD:320055"
     misc_feature    480..569
                     /gene="LOC4346304"
                     /note="EF-hand motif [structural motif]; Region: EF-hand
                     motif"
                     /db_xref="CDD:320055"
     misc_feature    order(507..509,513..515,519..521,540..542,714..716,
                     720..722,726..728,747..749,918..920,924..926,930..932)
                     /gene="LOC4346304"
                     /note="Ca binding site [ion binding]; other site"
                     /db_xref="CDD:320055"
     misc_feature    588..686
                     /gene="LOC4346304"
                     /note="EF-hand motif [structural motif]; Region: EF-hand
                     motif"
                     /db_xref="CDD:320055"
     misc_feature    687..776
                     /gene="LOC4346304"
                     /note="EF-hand motif [structural motif]; Region: EF-hand
                     motif"
                     /db_xref="CDD:320055"
     misc_feature    order(795..797,804..809,816..818,885..887,894..899,
                     903..908,933..956,960..965,972..977)
                     /gene="LOC4346304"
                     /note="homodimer interface [polypeptide binding]; other
                     site"
                     /db_xref="CDD:320055"
     misc_feature    795..890
                     /gene="LOC4346304"
                     /note="EF-hand motif [structural motif]; Region: EF-hand
                     motif"
                     /db_xref="CDD:320055"
     misc_feature    891..983
                     /gene="LOC4346304"
                     /note="EF-hand motif [structural motif]; Region: EF-hand
                     motif"
                     /db_xref="CDD:320055"
ORIGIN      

catcaatttcctccctgttgccgtacacctgcagctttggaagcttccagttaatagctccttcactcctctcctcctccttccccgatcgagatcatccaaaaatttcttgccaaaggccgcacctttgcagttctcactgcacaggtataaagaaaaggccacgcctttgcctcgtcagttatctcttcgtttcttcttcttcctccttcgacgagagcaagcaagaagccatggcggactacaaccgctacggctacggcggctacggctccaccccgtcagcgccacccgcctcctcctacggctacaccaccacgccctccgccccaccggcctcctcctcctcgtcctacggctacggacatggcggcggcggttacccgtcctccacctacccaccgccgccgccgtcgtcgtcgcaggcgtatcccatggggatggggggcttcctggtgttcccgccggggacgcacccggacgtggagcgcgccttcagggccgtggaccgcgacggcagcggctccatcgacgagcgggagctgcaggacgcgctctcctccgcctaccaccgcttcagcatccgcaccgtccgcctcctcctcttcctcttcaacaaacctgcctcccattccccctctcgcatgggtccagcagagttcgtgtcactgtggaattgccttgggcaatggcggggcattttcgacagatacgatagggacgggagtggaaaaattgagaaagatgagttgagagaagctctacgcagtcttggatatgcggttccaccttctgtccttgagcttcttatcgcgaactacaacaatggagtctccagccgtggcgcgttggactttgacaactttgtggagtgtggaatgattgttaagggtttaactgaaaaattcaaagagaaggatacacgctacagcggctcggcaactctttcatatgacgggttcttgtcaatggtcattcccttcattgtcccttgacttcttcgggtgtctcaagacccaaagagctttgaatttgtacagcttttcagctatgtttctgcttcctagttggatttgtttgtgcaaataggccttggtgattttattgactctgtgccgtactgtgtacttagtaccattttgttttccctatagcctatatcgactgttacctgtgattgcgtctcggttctgacatgctttgatcttagttatcctcaaatgtaattgccttttgatgctaacagataatatgggagagtaaactcagcatctatgttcagtcaagttcttaaaa

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