LOCUS       XM_015794703            1338 bp    mRNA    linear   PLN 07-AUG-2018
DEFINITION  PREDICTED: Oryza sativa Japonica Group ribonuclease 2 (LOC4325103),
            mRNA.
ACCESSION   XM_015794703
VERSION     XM_015794703.2
DBLINK      BioProject: PRJNA122
KEYWORDS    RefSeq.
SOURCE      Oryza sativa Japonica Group (Japanese rice)
  ORGANISM  Oryza sativa Japonica Group
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP
            clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_029256.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Aug 7, 2018 this sequence version replaced XM_015794703.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Oryza sativa Japonica Group
                                           Annotation Release 102
            Annotation Version          :: 102
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.1
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1338
                     /organism="Oryza sativa Japonica Group"
                     /mol_type="mRNA"
                     /cultivar="Nipponbare"
                     /db_xref="taxon:39947"
                     /chromosome="1"
     gene            1..1338
                     /gene="LOC4325103"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Gnomon. Supporting evidence
                     includes similarity to: 5 mRNAs, 52 ESTs, 11 Proteins, and
                     100% coverage of the annotated genomic feature by RNAseq
                     alignments, including 106 samples with support for all
                     annotated introns"
                     /db_xref="GeneID:4325103"
     CDS             85..939
                     /gene="LOC4325103"
                     /codon_start=1
                     /product="ribonuclease 2"
                     /protein_id="XP_015650189.1"
                     /db_xref="GeneID:4325103"
                     /translation="

MATARKAPRMVAIWAVVVVVVAADLFGAAVARSASARHAVGKKQREFDYFALALQWPGTICASTRHCCAINGCCRSEPLQTFTIHGLWPDYDDGTWPACCRHTSFDMDKILPLKPTLEKYWPSLYCSSSSTCFSGKGPFWAHEWEKHGTCSSPVVKDELEYFTTALDLYFKYNVTEMLASGGIHVSNGKQYALTDVIDAIKCAFGASPQIVCKKGSVEELRLCFDKDLKPLDCLTTTATNENVSKKKYCPRYITLPTYDPIVHANSTREIITVESEVYGYLYTS"

     misc_feature    223..783
                     /gene="LOC4325103"
                     /note="Ribonuclease T2 family; Region: Ribonuclease_T2;
                     pfam00445"
                     /db_xref="CDD:425687"
     misc_feature    order(235..237,346..348,745..747)
                     /gene="LOC4325103"
                     /note="B1 nucleotide binding pocket [chemical binding];
                     other site"
                     /db_xref="CDD:238512"
     misc_feature    order(247..249,262..264,499..501,739..741)
                     /gene="LOC4325103"
                     /note="B2 nucleotide binding pocket [chemical binding];
                     other site"
                     /db_xref="CDD:238512"
     misc_feature    order(328..351,499..534)
                     /gene="LOC4325103"
                     /note="CAS motifs [active]"
                     /db_xref="CDD:238512"
     misc_feature    order(337..339,346..348,352..354,508..513,520..525)
                     /gene="LOC4325103"
                     /note="active site"
                     /db_xref="CDD:238512"
ORIGIN      

cgccgagcgaattgaccgtacaaccaagccgcagagaagaggaaggcggaatcagtcgagggcgaggcggcggcggcggcggcgatggcgacggcgaggaaggcgccgcgcatggtggcgatctgggcggtggtggtggtggtggtcgccgccgatctgttcggagcggcggtcgcgcggtcggcgtcggcgcgtcacgcggtggggaagaagcagcgggagttcgactacttcgcgctggcgctgcagtggcctggcaccatctgcgcctcaacccgccactgctgcgccatcaacggatgctgccgctcggagccgctccagacgttcacgatccatgggctgtggccggactacgacgacgggacctggccggcgtgctgccgccacaccagcttcgacatggacaagatattgcccctgaagccgacgcttgagaagtactggccgtccctctactgctcatcctcttccacttgcttcagtggcaaggggcccttctgggctcatgagtgggagaaacatggaacatgctcatccccggtagttaaggatgaattagagtatttcaccactgctcttgacctctacttcaaatacaacgtcacggaaatgttggcaagtggtggtatccatgtttcaaatggtaaacaatatgcgctaactgatgtcattgatgccatcaaatgtgcttttggggcctcaccgcaaattgtttgcaagaagggctcagttgaagaactgaggttatgctttgacaaagatttgaagccccttgattgccttactactactgctaccaatgaaaacgtatcgaagaagaagtattgccctcgatacatcaccctgccaacatatgaccccatagtacatgctaattctactcgggagatcataacagtcgaaagtgaggtctatggatatctttacacatcctaagatacgattaccgcgagcaagaattacatggccatgatgaagccggtagttcagggctcttagctgcttaagacatactggggccggcattgaggttcaaggaaatgtatatctagataactcgattattacatttgtaagcacggcacgccagaacaacggagaatgtgattgtgtctgaaaaatcaattgctttatgtactatgcaaggttggaaaatagttcgtccatgtatatagtcattggtcagggtcatctgcgactgcaatctgctgaattataatggacagtggcaatcggtctgaacttttctggctacgaatatctatcatgtatgtgcccagagtacgtgttgacatggagcaagtcatcacgtgaattttgagtacaattcgttaa

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