LOCUS       XM_015792104            3369 bp    mRNA    linear   PLN 07-AUG-2018
DEFINITION  PREDICTED: Oryza sativa Japonica Group protein argonaute 16-like
            (LOC4342886), mRNA.
ACCESSION   XM_015792104
VERSION     XM_015792104.2
DBLINK      BioProject: PRJNA122
KEYWORDS    RefSeq; corrected model.
SOURCE      Oryza sativa Japonica Group (Japanese rice)
  ORGANISM  Oryza sativa Japonica Group
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP
            clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_029262.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Aug 7, 2018 this sequence version replaced XM_015792104.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Oryza sativa Japonica Group
                                           Annotation Release 102
            Annotation Version          :: 102
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.1
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            frameshifts :: corrected 2 indels
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-358               AP014963.1         9473504-9473861     c
            359-538             AP014963.1         9471681-9471860     c
            539-741             AP014963.1         9471384-9471586     c
            742-960             AP014963.1         9470449-9470667     c
            961-1097            AP014963.1         9470202-9470338     c
            1098-1195           AP014963.1         9470030-9470127     c
            1196-1293           AP014963.1         9469842-9469939     c
            1294-1450           AP014963.1         9469024-9469180     c
            1451-1567           AP014963.1         9468800-9468916     c
            1568-1675           AP014963.1         9468616-9468723     c
            1676-1738           AP014963.1         9468473-9468535     c
            1739-1852           AP014963.1         9468278-9468391     c
            1853-2018           AP014963.1         9468009-9468174     c
            2019-2134           AP014963.1         9467807-9467922     c
            2135-2272           AP014963.1         9467565-9467702     c
            2273-2403           AP014963.1         9466126-9466256     c
            2404-2469           AP014963.1         9465891-9465956     c
            2470-2533           AP014963.1         9461819-9461882     c
            2534-2645           AP014963.1         9461630-9461741     c
            2646-2719           AP014963.1         9461466-9461539     c
            2720-2814           AP014963.1         9461248-9461342     c
            2815-2846           AP014963.1         9461112-9461143     c
            2847-2926           AP014963.1         9460940-9461019     c
            2927-2965           AP014963.1         9460899-9460937     c
            2966-2966           "N"                1-1
            2967-3369           AP014963.1         9460496-9460898     c
FEATURES             Location/Qualifiers
     source          1..3369
                     /organism="Oryza sativa Japonica Group"
                     /mol_type="mRNA"
                     /cultivar="Nipponbare"
                     /db_xref="taxon:39947"
                     /chromosome="7"
     gene            1..3369
                     /gene="LOC4342886"
                     /note="The sequence of the model RefSeq transcript was
                     modified relative to its source genomic sequence to
                     represent the inferred CDS: inserted 1 base in 1 codon;
                     deleted 2 bases in 1 codon; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 5
                     ESTs, 10 Proteins, and 99% coverage of the annotated
                     genomic feature by RNAseq alignments, including 68 samples
                     with support for all annotated introns"
                     /db_xref="GeneID:4342886"
     CDS             359..3040
                     /gene="LOC4342886"
                     /note="The sequence of the model RefSeq protein was
                     modified relative to its source genomic sequence to
                     represent the inferred CDS: inserted 1 base in 1 codon;
                     deleted 2 bases in 1 codon"
                     /codon_start=1
                     /product="LOW QUALITY PROTEIN: protein argonaute 16-like"
                     /protein_id="XP_015647590.1"
                     /db_xref="GeneID:4342886"
                     /translation="

MSDNMAAKIGEIVQVHNDNPVKRVPIARPSFGREGKQIKLLSNHFTVKLSGIDAVFYQYSVSIKSEDDKVIDGKGIGRKVMDKVLQTYSSELAGKEFAYDGEKCLFTVGPLPQNNFEFTVILEETSSRAAGGSLGHGSPNQGDKKRSKCTHLAKKIVVGISYAAKIPLKSVALALQGSESDHAQDALRVLDIVLRQQQAKRGCLLVRQSFFSDDFRNLVDLTGGVSGCRGLHSSFRTTIGGLSLNMDVSTTMIVTPGPVFDFLLTNQNVRDIRDIDWPRAKKMLKNLRVKAIHNNMEFKIIGLSDEPCSRQTFPMKVRNGSSEGETVEITVQEYFKSKQVDLTMPYLPCLDVGKPKRPNYVPIELCHMVSLQRYTKALSSQQRATLVEKSRQKPQERMRVVTDAVKNNRYDDDPILSSCGIKIEKQLTRVDGRVLSAPTLVVGNSEDCIPNRGRWNYNNKRLFEPVKIERWAIVNFSARCDMSRISRDLINCGRTKGIIIERPFTLVDEDSQSRRCTPVVRVESMFEKVKANLPGPPEFLLCVLPERKNCDLYGPWKKKNLHEMGIITQCIVPSVKMNDQYYTNVLLKINAKLGGMNSKLSLEHRHMIPIVNQTPTLILGMDVSHGSPGRADVPSIAAVVGSRCWPLISRYRASVRTQSPKVEMIDSLFKPLDDGKDDGIIRELLLDFYKTSQQRKPKQIIIFRDGVSESQFSQVLNVELNQIIKAYQYMDQGPIPKFTVIIAQKNHHTKLFQENTPDNVPPGTVVDSGIVHPRQYDFYMYAHAGPIGTSRPTHYHVLLDEIGFLPDDVQKLVLSLSYVYQRSTTAISVVAPICYAHLAAAQMGQFMKFEEFAETSWKWWCPFVIRSSGXQSCRACMLMSAVRCSFVEVVLVS"

     misc_feature    413..2926
                     /gene="LOC4342886"
                     /note="protein argonaute; Provisional; Region: PLN03202"
                     /db_xref="CDD:215631"
ORIGIN      

aaaaaaaaacggttcgatattttccctctcctctctcgttttcccgtcgcgttcgctggggtggagcggcatttagggtttgtgcgccggccgccgccctccccgcacgacgccgacgccgccctcctcgcccaacgccggctcagccccttctcctccccgcccgacgccgccccttctcctccccgtcccacgccgaccccgcccgacgccggcgccactctgcttgtccccggccggcgccgagcctgctcctccccgcccgacgccggcgccgccgacgctgctctgctcctccccgaccggcgccgacctgctcctcccagcccggagcccgacgccggcacatctcatccagatgtccgataacatggctgccaaaattggtgaaattgtccaagtacataatgataatcctgtaaagagagtacctattgcacgacctagctttggccgtgaaggaaagcaaatcaagctgctctcaaaccacttcactgtgaagcttagtggaattgatgcggttttctaccaatacagtgtttccatcaaatctgaggatgataaggtgattgatggaaagggtattggccgaaaggtcatggataaagtgctgcaaacatacagctctgagcttgctgggaaggaatttgcgtatgatggtgaaaaatgtctatttactgtggggcctcttccacagaacaactttgagttcactgttatcttggaggaaacatcttcaagagctgctggtgggagtctagggcatggaagccctaatcaaggtgacaagaagcgatcaaagtgcacacatcttgcaaaaaaaattgtagtgggcataagttatgcagcaaagattcccctgaagtcagtagctttggcccttcaaggaagcgagtcagatcatgctcaggatgctctgagagtccttgatattgtcttaaggcaacaacaggctaagcgaggttgcctgcttgttaggcaatcatttttcagtgatgactttagaaacttagttgatttaactggtggagttagtggatgtcgtggactccactcgagtttccgtactaccattggtggtttatctttgaacatggatgtttcaaccactatgattgtgactcctggaccggtttttgatttcctccttacaaatcaaaatgtcagagacattagagatatcgactggcccagggccaagaaaatgttgaaaaacctgagagttaaagctattcacaataacatggagttcaagatcattggtctgagtgatgagccatgctctagacaaacattccccatgaaagtacgaaatggaagcagtgaaggtgaaaccgttgaaattactgtccaggaatattttaagtccaagcaggtggatttaacaatgccttatttgccatgtcttgatgtgggaaaaccaaaacgcccaaattatgttccaattgagctgtgccatatggtatcacttcaaagatatacaaaggcgctttcttctcaacaaagagcaaccttggttgaaaaatcacgtcagaaacctcaagagcgcatgcgagttgttactgatgctgtaaaaaacaatagatatgatgatgatccaatcttatcttcttgtggaattaaaattgagaaacaactcactcgtgtcgatggtcgtgttctgtctgcaccaacgctagtcgtggggaatagtgaagattgcattccaaacagaggcagatggaactacaataacaagaggctatttgagcctgtcaagattgagcgttgggcaattgttaatttctctgctcggtgtgacatgagccggatctcaagagacctgataaactgtggacgaactaaaggcattattattgaacgccctttcaccttggtagatgaggatagccaatctaggagatgtactcctgttgtaagggttgaaagcatgtttgaaaaagtgaaagcaaaccttcctggtcctcctgaatttttgctgtgtgttttaccagaaaggaaaaattgtgatctctatgggccatggaagaagaaaaaccttcatgagatgggtattattactcaatgcattgttcctagtgttaagatgaatgatcagtactataccaatgttcttctgaaaatcaatgctaagcttggtggaatgaactccaagctttcattggagcatcgacatatgattcccattgtcaatcaaacacccacattaattttgggaatggatgtttcacatggttcgccaggtcgagctgatgtaccatcaattgctgcggttgttgggtccagatgttggccgctgatatcacgctacagagcatctgtccggacccagtctccaaaggtagagatgattgattctctttttaagccactggacgatggaaaagatgatggcataataagggaacttctactggacttctacaagaccagtcaacaaagaaagccgaagcagataatcattttcagggatggtgtgagcgagtctcaatttagccaagtactgaatgttgagcttaatcaaattataaaggcatatcaatatatggatcaggggccaattcctaagttcacagtgatcattgctcaaaagaatcaccacacaaaacttttccaagaaaatactccagacaacgttcctccagggactgttgtagattctggtattgttcatccaagacagtatgatttctacatgtatgctcatgctggacctataggtacctcaaggcccacccattaccatgtcttgctcgatgagattggtttcttgcccgatgacgtgcagaaactagttttgtcgctttcttatgtgtatcagaggagcaccactgcaatatctgttgtggcacctatctgttatgctcatctcgcagcagcgcagatgggccagttcatgaaattcgaggaattcgctgagacttcgtggaagtggtggtgtcccttcgtcatcaggagcagtggtncccagagttgccgcgcctgcatgctgatgtctgcagttcgatgttcttttgttgaggtggtgttagtcagctagtgtgcagcagggctgatccttcttttttttttgaaggaaccaaatacggagtacttgttaggcacttttgtagtactctagattgatactatgagatacatctaggttgggtagggagcatttttttttagatgatatagtgctcctaatgatatagttctgttagtgctcagctattaggaagtaaaggcttacccttgatggtaggtttatgaattcaagacgctaactttgcgccatatctaattgtcaaccagttaaacagatgattcgcacatgcctgtttcgctctcagttgtatccgcatcttattttttgcatttttttca

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