LOCUS       XM_015777723             900 bp    mRNA    linear   PLN 10-JUL-2024
DEFINITION  PREDICTED: Oryza sativa Japonica Group protein argonaute 12-like
            (LOC107278545), mRNA.
ACCESSION   XM_015777723
VERSION     XM_015777723.3
DBLINK      BioProject: PRJNA1123306
KEYWORDS    RefSeq.
SOURCE      Oryza sativa Japonica Group (Japanese rice)
  ORGANISM  Oryza sativa Japonica Group
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP
            clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_089037) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Jul 10, 2024 this sequence version replaced XM_015777723.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_034140825.1-RS_2024_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/21/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..900
                     /organism="Oryza sativa Japonica Group"
                     /mol_type="mRNA"
                     /db_xref="taxon:39947"
                     /chromosome="3"
     gene            1..900
                     /gene="LOC107278545"
                     /note="protein argonaute 12-like; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 7 long
                     SRA reads, and 100% coverage of the annotated genomic
                     feature by RNAseq alignments, including 13 samples with
                     support for all annotated introns"
                     /db_xref="GeneID:107278545"
     CDS             5..706
                     /gene="LOC107278545"
                     /codon_start=1
                     /product="protein argonaute 12-like"
                     /protein_id="XP_015633209.1"
                     /db_xref="GeneID:107278545"
                     /translation="

MYVVSDCTYPLCQKSQRFFGAHTIHYDLGEDSEAGVDSEGIASVAASLDWPKFRKYHTLISHQPHNGIINLHSRRGGMMTKFFRSFYKMIKERPKRIIFYRGGLMEGEMERICLQEIDAIKQACAYSYKEDQPSLTYVVVVPTASIGTEADTAKYKFFCRHTTHKSTSRVVRYHVVHDDNNFLAGELQSLTLKLFTFRHRREYPKIDAVVPAYYAERAAFKAYRAECAASKAS"

     misc_feature    <56..670
                     /gene="LOC107278545"
                     /note="PIWI domain. Domain found in proteins involved in
                     RNA silencing. RNA silencing refers to a group of related
                     gene-silencing mechanisms mediated by short RNA molecules,
                     including siRNAs, miRNAs, and heterochromatin-related
                     guide RNAs. The central component...; Region: Piwi-like;
                     cl00628"
                     /db_xref="CDD:412485"
     misc_feature    order(68..70,74..76,308..310,650..652)
                     /gene="LOC107278545"
                     /note="active site"
                     /db_xref="CDD:239208"
     polyA_site      900
                     /gene="LOC107278545"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      

agttatgtacgtcgtcagcgactgcacttaccccttgtgtcagaagtcccaacgattttttggtgctcacacgatacactatgatcttggagaggattcagaggcaggagtggattcagagggcattgcatctgtggcggcttcattggactggccaaaattcagaaagtatcatacattaatttcacatcaacctcataatggcatcataaatctccattctagacgtggtggcatgatgaccaagttctttcggtccttctacaaaatgataaaagaaagacccaagaggataatcttctacagaggtggattaatggaaggtgagatggagcgcatttgcctgcaagaaatagatgctattaaacaggcttgtgcctattcctacaaagaagatcaaccatcactgacatatgtggtcgtggtgcctactgcatcaattggaactgaggctgacaccgctaagtataagttcttttgccgccatactactcataagtcaacctcccgcgtggtccgctaccacgttgtccatgacgacaacaactttctagctggtgaacttcagtctctaaccttgaagcttttcaccttccgtcatcgtcgggaatacccaaagatagatgcagttgtaccggcctactacgcagagcgtgctgcattcaaagcttatcgcgcagagtgtgctgcatccaaagcttcttaagaagagcaaagcgagatgagaatgttgctactctagcaaaaattaatcagatgtttatctaacttattaagatgtctggtgtattttgaactcaaaaacgagtgtgcatatggtaacctgttaccgctgttgatcagacgtgttatggcgcttgtttttgttaatagttcaatgctgcgggttttgaaattgca

//