LOCUS       XM_015774404            3638 bp    mRNA    linear   PLN 07-AUG-2018
DEFINITION  PREDICTED: Oryza sativa Japonica Group protein argonaute 11-like
            (LOC4333733), mRNA.
ACCESSION   XM_015774404
VERSION     XM_015774404.2
DBLINK      BioProject: PRJNA122
KEYWORDS    RefSeq; corrected model.
SOURCE      Oryza sativa Japonica Group (Japanese rice)
  ORGANISM  Oryza sativa Japonica Group
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP
            clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_029258.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Aug 7, 2018 this sequence version replaced XM_015774404.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Oryza sativa Japonica Group
                                           Annotation Release 102
            Annotation Version          :: 102
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.1
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            frameshifts :: corrected 2 indels
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-564               AP014959.1         27177454-27178017   c
            565-770             AP014959.1         27175537-27175742   c
            771-923             AP014959.1         27175306-27175458   c
            924-1038            AP014959.1         27174645-27174759   c
            1039-1040           "NN"               1-2
            1041-1054           AP014959.1         27174631-27174644   c
            1055-1173           AP014959.1         27173218-27173336   c
            1174-1494           AP014959.1         27172794-27173114   c
            1495-1611           AP014959.1         27172548-27172664   c
            1612-1719           AP014959.1         27171069-27171176   c
            1720-1791           AP014959.1         27170921-27170992   c
            1792-1914           AP014959.1         27170310-27170432   c
            1915-2092           AP014959.1         27170053-27170230   c
            2093-2172           AP014959.1         27169860-27169939   c
            2173-2214           AP014959.1         27169816-27169857   c
            2215-2352           AP014959.1         27169564-27169701   c
            2353-2495           AP014959.1         27167482-27167624   c
            2496-2561           AP014959.1         27167322-27167387   c
            2562-2625           AP014959.1         27167174-27167237   c
            2626-2761           AP014959.1         27166931-27167066   c
            2762-2835           AP014959.1         27166774-27166847   c
            2836-2930           AP014959.1         27166178-27166272   c
            2931-2962           AP014959.1         27165769-27165800   c
            2963-3638           AP014959.1         27164904-27165579   c
FEATURES             Location/Qualifiers
     source          1..3638
                     /organism="Oryza sativa Japonica Group"
                     /mol_type="mRNA"
                     /cultivar="Nipponbare"
                     /db_xref="taxon:39947"
                     /chromosome="3"
     gene            1..3638
                     /gene="LOC4333733"
                     /note="The sequence of the model RefSeq transcript was
                     modified relative to its source genomic sequence to
                     represent the inferred CDS: inserted 2 bases in 1 codon;
                     deleted 2 bases in 1 codon; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 5
                     Proteins, and 95% coverage of the annotated genomic
                     feature by RNAseq alignments, including 19 samples with
                     support for all annotated introns"
                     /db_xref="GeneID:4333733"
     CDS             88..3153
                     /gene="LOC4333733"
                     /note="The sequence of the model RefSeq protein was
                     modified relative to its source genomic sequence to
                     represent the inferred CDS: inserted 2 bases in 1 codon;
                     deleted 2 bases in 1 codon"
                     /codon_start=1
                     /product="LOW QUALITY PROTEIN: protein argonaute 11-like"
                     /protein_id="XP_015629890.2"
                     /db_xref="GeneID:4333733"
                     /translation="

MSSRGGGVGGRRGGPGGASSVRGGERGRKRGRGALDAVEPRVPLPRGTGSGPGAGRDGAAAPVPALQPAEADVLSGEVETEMAAGMEAREGASSSSSASAPAVGEVEPPSRAVGALPPTSSKAVVLQARPGFGTVGTSCRVRANHFVVQLADKEIYHYDVAIAPELRSRERNRNIINELLRSHKKYLDGRRSPAYDGRKGMFTAGALPFTDREFVVKIANDPERGNQGEKEFKVTIKCAGAANLYMHSLKQFLAGRQRELPQDTIQALDIALRECPSSRYISISRSFFSQAFGHKDIDCGVEWWRGYYQSLRPSQMGXSLNIDISATTFYKAQPVIDFALDYLNMNIRDAYSRCLRDQDRLKLKKALKGVRVETTHRRDVSIRYKITGLTSAPLKDNASTFYLIRLNFIYLSTSYTSTCYVCLYRFDQDGTRVSVVQYFNRQYSYSLKYINWPCLQAGSDSRPTYLPMEVCRIVKGQRYSRKLNECQVTRMLRLARETPEERENSILEIANENNYGNDYHAREFGIGVTNQLALVDARVLPAPMLKYHDSGQEKVCNPSIGQWNMNNKRMLNGGSINYWACLTFASCVRLAEVRTFCKELVRVCNSIGMQITGEPCVRIRQERQDHLDAAVRDIHRQSAEFLSQQGVIGQQLELLVIVLPDANATVFYGRIKRLCETELGVITQCCLARNVQNVRTQYLRNLALKINVKVGGRNTVLEDALHRRIPLLTDMPTMIFGADVTHPPAGEDSSPSIAAVVASMDWPEVSKYKCSVSSQSHREEIIADLFTEVKDSQNRLVYGGMIRELIESFRKANGSYKPGRIIFYRDGVSEGQFSQVLLSEMDAIRKACASIEEGYLPPVTFVVVQKRHHTRLFPEDHHARDQMDRSRNILPGTVVDTKICHPSEFDFYLCSHSGIQGTSHPTHYYVLFDENNFSADALQTLTYHLCYTYARCTRSVSIVPPVYYAHLAASRARHYLEEGSLPDHGSSSASAAGGSRRNDRGVPVKPLPEIKENVKQFMFYC"

     misc_feature    388..3150
                     /gene="LOC4333733"
                     /note="protein argonaute; Provisional; Region: PLN03202"
                     /db_xref="CDD:215631"
     misc_feature    1645..3015
                     /gene="LOC4333733"
                     /note="PIWI domain, Argonaute-like subfamily. Argonaute is
                     the central component of the RNA-induced silencing complex
                     (RISC) and related complexes. The PIWI domain is the
                     C-terminal portion of Argonaute and consists of two
                     subdomains, one of which provides the...; Region:
                     Piwi_ago-like; cd04657"
                     /db_xref="CDD:240015"
     misc_feature    order(2089..2091,2101..2103,2137..2148,2155..2157,
                     2179..2181,2188..2190,2200..2202,2212..2214)
                     /gene="LOC4333733"
                     /note="5' RNA guide strand anchoring site [active]"
                     /db_xref="CDD:240015"
     misc_feature    order(2302..2304,2308..2310,2563..2565,2983..2985)
                     /gene="LOC4333733"
                     /note="active site"
                     /db_xref="CDD:240015"
ORIGIN      

gcctcgtctcgcttcaggccttcagcttccattaatttccttccgtgggtttgcgtgcttctagctccgcttgcttgtctaccggccatgtcttcccgcggcggcggggtagggggccggcgcggtggccccggcggcgccagcagtgtccgtggcggcgagcgcggacgcaaacgcggtcgaggtgctttggacgccgtggagccccgcgtcccgcttccacggggcacgggatccggccctggggctggccgggacggagccgccgcgccggtgccggcgctgcaaccggcggaggcggatgtgctcagcggcgaggtggagacggagatggcggccgggatggaggcgcgcgagggggcgtcgtcgtcgtcgtctgcttcggcgccggcggtgggggaggtcgagccgccgtcgcgggcggtcggtgcgctgccgccgacgtcgagcaaggcggtggtgctccaggcgaggccggggttcgggacggtcgggacgagctgccgcgtccgcgccaaccatttcgtcgtgcagcttgccgacaaggagatctaccattacgatgttgccatcgcccctgaattgagatctcgagaaaggaacaggaatataatcaatgaacttttaagatcacacaaaaaatacttggatgggcggcgttcgcctgcttatgatggaagaaaaggcatgtttacggctggtgcattgccttttacagacagagagttcgttgtcaaaattgcaaacgaccctgagagaggaaaccagggggagaaagagttcaaagtgaccataaagtgtgctggtgctgcaaacttatatatgcacagccttaagcaattcttggctggtaggcagagagagctgccgcaagacactatccaggctcttgatatcgctcttagggaatgtcccagttcaaggtacatatccatctcaagatcgtttttctcacaagcatttggacataaggatattgattgtggcgttgaatggtggagagggtattaccagagtctacgcccctcgcagatgggannttctcttaatattgatatttctgcaacaacattttacaaggctcagccagtaattgactttgcattggactatctgaacatgaacattcgtgatgcttattcaaggtgtttacgtgatcaggaccgtctgaaactaaagaaagcccttaaaggagtccgggttgagaccacacatcgacgtgatgtgtccatacgttacaaaattactgggctaacttcagctcctttgaaggacaatgcaagcaccttttatttgatcagattgaattttatctatttatccacatcatatacatcgacttgttatgtttgcttgtacaggtttgatcaagatgggacaagggtatcagttgtccagtacttcaatcgccaatacagttattctttgaaatatattaactggccgtgccttcaggctggcagcgacagcaggccaacatatttacctatggaggtttgccgcatagtaaaaggacaacgctattctagaaaattaaatgaatgtcaagtcacacgcatgttgaggttggcacgtgagacaccagaagaaagggagaatagtattttagagattgctaatgaaaacaactatggcaatgattatcatgccagagaatttggcatcggggtgacaaaccaacttgccttagtcgatgctcgtgtactccctgctccaatgcttaagtaccatgactctggacaagagaaagtatgtaatccttccattggtcagtggaacatgaataacaagaggatgctcaatggtggatccatcaattactgggcatgcttgacttttgcttcctgcgtacgtctggctgaagttaggacgttttgcaaggagttggttcgtgtgtgcaatagcattggcatgcaaattaccggggaaccatgtgtccgtattaggcaagaacgccaagatcacttagatgctgctgtcagagatatacatcgacaatctgcagaatttctttctcaacaaggtgtgatcgggcaacaacttgagttactggtaatagtactacctgatgcaaatgcaactgtcttttatggaaggataaagcggctttgtgaaactgaacttggtgtgataactcagtgctgtttagctaggaatgttcagaatgtccgcacacaatatctccgaaacctggcacttaaaatcaatgttaaggttggtggacgaaatacagtactggaagatgctttgcataggagaattcctctgttaacagatatgcctacaatgatctttggagctgacgtgacccatccacctgccggggaggattcatctccatcaattgctgcggttgttgcatcgatggattggccagaagtgtcaaaatacaaatgctcggtttcttcgcaaagccatagggaagagatcatagctgatctcttcacagaggtgaaagattcacagaacagacttgtttatggtggaatgatcagagagttgatagagtctttccgtaaagcaaatggcagctacaaacctggaaggataatattttatcgagacggtgttagtgaaggccagtttagccaagttctgcttagtgaaatggatgcaattcggaaggcttgtgctagcatagaggagggctacctccctccagttacctttgttgtggtgcaaaagaggcatcacacccgtctttttcctgaagatcatcacgcgagggatcagatggatcgaagcagaaacatcttacctggaactgttgttgacactaagatatgccatcccagtgaatttgacttttacctttgtagccattctggcattcagggaacaagccaccccacgcattactatgttctattcgacgagaacaatttcagcgccgatgcattgcaaacattgacttaccatttgtgctacacatatgcacgctgcacgcgatcagtctccatagttcctccggtgtactatgcgcacctggcggcttccagagcgcggcactacctggaggagggatcactccccgaccacggatcgtcttctgcttctgcagccggcggttctcggcggaacgaccgtggtgtgccggtgaagccgctgccagagattaaggagaatgtgaagcagttcatgttttactgctgaagtaactagtccctccgtttcaggttataagactttctaccattgccgacattcatatagatattaataaatctaaacatatgtaaatatgtaaaatctagacatatatgtctaaattcattaatatttatgtgaatatagacaatactagaaaatcttataatataaaatggaggaagtagctagcttgctaggtggatcatcttttgccaagaaccaagttaagcgtctgtccgtgcttttgtgtggttgtgaaatcagactcggtgtcttgcagatcgacttgtgtgttgtgaatatgttaaagtcacaacagtctgggctaagctaagtagtagtacttcatagtactagaatatgggaatcatgttggacacaatctgaagttaaccggctgctgttgttatgccggcttcacatatattgtttgtgcgatctactcactttttttcaaaataagaaaagactagaatacctctatctta

//