2024-04-29 04:52:17, GGRNA.v2 : RefSeq release 222 (Jan, 2024)
LOCUS XM_015774169 462 bp mRNA linear PLN 07-AUG-2018 DEFINITION PREDICTED: Oryza sativa Japonica Group protein argonaute MEL1-like (LOC107280339), mRNA. ACCESSION XM_015774169 VERSION XM_015774169.1 DBLINK BioProject: PRJNA122 KEYWORDS RefSeq; includes ab initio. SOURCE Oryza sativa Japonica Group (Japanese rice) ORGANISM Oryza sativa Japonica Group Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_029258.1) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Oryza sativa Japonica Group Annotation Release 102 Annotation Version :: 102 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## ##RefSeq-Attributes-START## ab initio :: 7% of CDS bases ##RefSeq-Attributes-END## FEATURES Location/Qualifiers source 1..462 /organism="Oryza sativa Japonica Group" /mol_type="mRNA" /cultivar="Nipponbare" /db_xref="taxon:39947" /chromosome="3" gene 1..462 /gene="LOC107280339" /note="Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, and 68% coverage of the annotated genomic feature by RNAseq alignments" /db_xref="GeneID:107280339" CDS 1..303 /gene="LOC107280339" /codon_start=1 /product="protein argonaute MEL1-like" /protein_id="XP_015629655.1" /db_xref="GeneID:107280339" /translation="
MTPRPPGPPPKYQQPGHQPAVVYRAPSAKEVEQKLFVSETALAPPAAAASASAGEAPVSKKGLAHPTRRPGFGTAGNEVMIRANRFLVNVADNNHYSRTS"
ORIGIN
atgacgccgcggccgccagggcctcctccgaagtaccagcaacccgggcaccagccggccgtcgtctacagggcgccgtcggccaaggaggtcgagcagaagctgttcgtgtcggagaccgcgctagcgccacccgcagcggcggcgtccgcgtccgctggcgaggcgccggtgtcgaagaaggggctcgcccaccctacgcggcggccggggttcggaacggccgggaacgaggtgatgatccgcgcgaaccgcttcctcgtcaacgtcgccgacaacaaccactacagcagaacaagctagcagtgacgggctcaaaccctcaactgtgacggatagaccccctcgtcacagatcaatggtcactgatgacttaactcacctttgacgggtgtaggtccgtcagaggtgacagacacctttgacgggttgtgtcatgtggtcacatatgagaaaaatcac
//
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@meso_cacase at
DBCLS
This page is licensed under a
Creative Commons Attribution 4.0 International License (CC BY 4.0).
If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596.
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