LOCUS       XM_015764423            5534 bp    mRNA    linear   PLN 07-AUG-2018
DEFINITION  PREDICTED: Oryza sativa Japonica Group uncharacterized LOC4352551
            (LOC4352551), transcript variant X2, mRNA.
ACCESSION   XM_015764423
VERSION     XM_015764423.2
DBLINK      BioProject: PRJNA122
KEYWORDS    RefSeq.
SOURCE      Oryza sativa Japonica Group (Japanese rice)
  ORGANISM  Oryza sativa Japonica Group
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP
            clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_029267.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Aug 7, 2018 this sequence version replaced XM_015764423.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Oryza sativa Japonica Group
                                           Annotation Release 102
            Annotation Version          :: 102
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.1
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5534
                     /organism="Oryza sativa Japonica Group"
                     /mol_type="mRNA"
                     /cultivar="Nipponbare"
                     /db_xref="taxon:39947"
                     /chromosome="12"
     gene            1..5534
                     /gene="LOC4352551"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Gnomon. Supporting evidence
                     includes similarity to: 1 mRNA, 24 ESTs, 4 Proteins, and
                     100% coverage of the annotated genomic feature by RNAseq
                     alignments, including 43 samples with support for all
                     annotated introns"
                     /db_xref="GeneID:4352551"
     CDS             56..5101
                     /gene="LOC4352551"
                     /codon_start=1
                     /product="uncharacterized protein LOC4352551 isoform X2"
                     /protein_id="XP_015619909.1"
                     /db_xref="GeneID:4352551"
                     /translation="

MSAPRPAASAAAAAAANPSASTSQPPPPPPHPPPPPPPPPPPPPAAAAPSRSSSAAAAAVARVREEGEVSSGADDDEPLRARFTAPSNVSKYADASTQVLSANFPGKVAPSYKKTTRVNQGLFKPGTNRNLTWQKPVSSDNLVISFSDDDSGSDSGMSKQDKRGRKDSSQGTYKTGINVHTGIMREEAPQQKIHAAKVGSANWSAVPLTYRNSGVGRGLSATFARRDPPVRQVTPQKAIHKDGNVVGVSSAVHNLESLRHKIAARENELKVKRPMSPSLLKDSSFPTGQTRLPLEKIGFEASSIGACSHLNGPVGHDIRPIKRLKPNQECSNNQVLVNQIPPVPTGKSLGKSNVQPCERREHIENGIRDCNVNEAVHTVTTEPGGHHIGAIKSLSLSKMQHTVIPDADNHVTGKQHVKHAAPPTANEQSVVEDANTLVPITSVRAGANVEMSSIQVKDNMLSTWNGQHIMPADTSTVPNLRPQLGPGVENAENCGDQIVITGQNTSLLSLLEMEEFQERELEDAQEHRRKCEVEEREALRAYRRAQRALIEANERCAILRRKRELCSAQVHGFIAENSSLAQPLSIQNAGHGLVMPSVLNSQANADGQMPGNQGGRSGSPYPEESPQQPVDKHEARSHNFNDNSTPSDYMEDDLLPPSKRARSDCISNLEDHMEETIHVYPVENRQISGESVQDYELLEASLRSRLVERFGKKSYLNNSGEATEELSFGKVSEIEREKAYVGPLLQEADENVMTNIEGMVELGNDAHEKRADSSNAPSIGNYDHEENISSFGELCMPLSVTHPIIPSSAPQNAARHMKGLFPDLHKKASDYKNDCQTSNAASVATVRLPDVAKDNAKMHSTTRKDMDIVSGAVDPFWPFCMFELRGKCNDEECPWQHVEHHAWRKSKHTKHSKPSFSGWIPYGLFQHILPVPTYRVGSNLIRADLNLIQSVLASSIWQYWQRGFCASFPFPLSVQRVLPSDAPSLQAGDDSSANFDRDRQLLNLRMLDSRKNKIVQGSVDAELFLEGALILYFGKINKPDRLKALLYLARAIEADPSTVILWVFYLHIYYQKDEGLGKDDMFSHAVQHNVCSYELWLMYINSRLRFDDRLDAYNDALSMLCQMTAVTDMELKDRSSFVLDIFLQMVYFLCMSGNVDKAISRIYGILPTATPDCSGDKLLADVISCLTISDRCIFWISCIYVSIYRKLPEEIIDQLEFLKDLPNSLVWSPIELTVDNRSQILVLLNYAAGKIAVDINETVKNGDPSYLRLSQFLAVNHINCLATLEGFQSCANLLVKYMEEYPMCPHILVFSARLHRKYGSCPGLKGFDELLLGWPKEVQGIQYLWNQCAEHALADNIELAEKLLTRWFEEYGKDGDIQSGGATRPMEISNEESVRSSVSSIQEVGSGTSTSEDQIFWLLNLSLYRTIENNLQEAKVAMDKALKLAHGESYEHCIKEHAAIHTLEKTSSSTDVQTQATFSLISGYLVDQRNLPVRDLLSRRFMKNVKKHRLKRLIDETIGPTSANPALINSVLEVCYGPSLLPETIGEVKYLVDFVESVMEVLPANYRLALAVGKFMVKHCTGDDSISMGTRFWASSILINAIFRAVPVAPESVWLEGASLLEKLQAAETVKRFYQQATSVYPFSFKLWHSYLNSCKASGSSTESIAEAARQRGIELSVTPP"

     misc_feature    <1589..1750
                     /gene="LOC4352551"
                     /note="Trichohyalin-plectin-homology domain; Region: TPH;
                     pfam13868"
                     /db_xref="CDD:433539"
     misc_feature    2690..2749
                     /gene="LOC4352551"
                     /note="Putative zinc-finger domain; Region: zf-C3H1;
                     pfam10650"
                     /db_xref="CDD:431418"
     misc_feature    <3308..>3535
                     /gene="LOC4352551"
                     /note="necessary for RNA interference; Region: NRDE-2;
                     pfam08424"
                     /db_xref="CDD:429988"
ORIGIN      

aagaagacgcgagcgcgaaggcaacgcgacgcgaccccgcccgcacacgctacccatgtcagccccgcgacccgcggcctccgcggcggcggcggcggccgcgaaccctagcgcgtccacctcgcagcctccccctcctcctcctcatccgccgcctcctcctccgcctccgcccccgcctccgcctgcggccgcggcgccctccaggtcttcgtcggctgcggcggcggcggtggccagggtgcgggaggagggagaggtctcctccggcgccgacgacgacgagcctctgcgggctcggttcactgctccatccaatgtttccaaatatgcggatgcttctactcaagtgttgtcagcaaattttcctggaaaagttgctccaagttataagaagacaacgagggtgaatcaagggcttttcaaacctggcaccaatcgaaaccttacttggcaaaagcctgtgtcaagtgataaccttgtgataagtttctctgatgatgatagtgggtccgactctggaatgtcaaagcaagataagagaggcaggaaagacagttcacaaggtacatataaaacagggattaatgtgcacactggaattatgagggaagaagcacctcaacagaagatccatgctgcaaaggttggatctgcaaattggtcagctgttccactaacatataggaattcaggggtaggcaggggattgagtgccacctttgctaggagagatccacctgttcggcaagtcactccccaaaaggccatccataaggatggaaatgttgtgggagtaagttcagcggttcataatttggaaagcttacgccacaaaattgctgctagggaaaatgaattgaaagtgaaaagaccaatgtcacctagtcttttgaaggactcaagttttcccactggtcagacaaggttacccttggaaaagataggatttgaagcttcaagcattggtgcatgctcacaccttaatggtcctgttggacatgatattagaccaattaaaaggttgaagcccaatcaggagtgctccaacaaccaagttcttgttaatcagataccacctgtacctactggcaagtcactggggaaaagcaatgtgcaaccttgtgaaagaagagagcatatcgaaaatggaattagggactgcaatgttaatgaagcagtgcatactgtaacaacagaaccgggtgggcatcatattggtgccattaagagcctttcattatccaaaatgcagcatacagttataccggatgctgacaaccatgttacaggtaaacaacatgttaagcatgcagcaccaccaactgctaatgagcaatctgtggtggaagatgctaacactctggtgcctataacttctgtccgagctggtgccaatgtagaaatgtcatctattcaagtgaaggataacatgctttctacttggaatgggcaacatataatgcctgctgatacatcaacagtgccaaacctgagaccacagttgggacctggagtggagaatgccgagaactgtggtgatcagatagttatcacaggtcagaacacatcattgctctctctgcttgagatggaggaatttcaagagagggagctggaggatgctcaagagcatagaaggaagtgcgaagtagaggaaagagaagctctaagagcttatcgcagagcacaaagagctttaattgaggccaatgaaaggtgtgccattcttcgcagaaaaagagagctttgctctgcacaagtccatggttttatcgctgaaaattcttctttggcacagcctttgagtattcagaatgctggacacggtcttgtaatgccatctgtgctcaactctcaagctaatgcagatggtcagatgcctggaaatcagggtggcaggtctggcagtccatacccagaggagtcccctcagcagccagttgataagcatgaggcacgctcacacaatttcaatgataacagcacaccttcagattacatggaggatgatcttctacccccctcaaagcgggcaagatcagattgtatttcaaatctggaagatcacatggaagaaactatacatgtttatcctgtggaaaacagacaaatttctggtgaaagtgtgcaggactatgagcttttggaagcttctttgagatcaaggttggtggagagatttgggaagaaatcatatttgaataattctggagaagccactgaagaactctcctttggaaaagtatctgagattgagcgtgagaaggcatatgtgggacctctgctacaggaggctgatgagaatgttatgacaaacattgaaggtatggtggagcttgggaatgatgcacatgaaaagagagctgattctagcaatgcgccttcaattggcaactatgatcatgaggaaaatatttcctcttttggagaattatgcatgccattgagcgtgactcatcccattattccttcttcagctccacaaaatgctgcaagacacatgaagggtttatttcctgatttacacaagaaagcttcagactacaaaaatgactgtcagaccagcaatgcagcctctgtagcaacggttcgtttgccagatgttgccaaggataatgctaagatgcactcaacaactagaaaggatatggacattgtgagtggtgcggttgatcccttctggcctttctgtatgtttgagcttcgaggaaaatgcaatgatgaagaatgtccatggcaacatgttgagcatcatgcttggagaaagtcaaagcacacaaagcattcaaagccctcattttcagggtggattccttatggtctgtttcagcatattctgcccgtgccaacttatcgtgttggttcaaatcttattagggctgatctgaacttgatccagtcggtgttggctagcagcatttggcagtattggcaaagggggttttgtgcttcctttccttttcctttatctgttcaaagggtgcttccatcagatgctccatccttacaggctggtgatgattcgagtgcaaattttgatagggacagacaactattgaatcttcgaatgctggatagtaggaagaataagattgtacagggatctgttgatgctgaactattcttagaaggggcactaattctgtattttggaaaaatcaacaaacctgataggctcaaggctcttttatatctagcacgtgctattgaggccgatccaagcacagttatcttgtgggtgttttatcttcatatttactatcaaaaggatgaaggactagggaaagatgacatgttttcccatgcggttcaacacaatgtttgctcctatgaactatggcttatgtacattaacagcaggttgcgctttgatgatcggttggatgcttacaatgatgctttgagcatgctctgccaaatgacagctgtcacagacatggaattgaaagatagaagttcttttgtcctagatatcttcttacagatggtttacttcttgtgcatgtctggaaatgtggacaaagcaatttccaggatttatgggattctgccgactgcaactcccgactgttctggtgacaagttgctcgctgatgtcatttcttgcttgaccatttctgacagatgcatattttggatttcctgcatatatgtctcaatttacaggaaacttccagaggaaattatagatcaactggaatttcttaaggatttacctaattcgttagtatggtctcctattgaacttacagtagataacagaagtcagattttagtactattgaactatgctgctggtaagattgctgtagatattaatgaaacggttaaaaacggggatccatcttacctgaggctctcacaattcctcgctgttaaccacattaattgtctagctactcttgaaggcttccaatcttgtgctaatctgctggtgaagtatatggaggagtatccaatgtgtcctcatattcttgttttctcagctcggctacatagaaagtacggttcatgtcctggtctgaaaggatttgatgaattgctcctgggttggcctaaagaggtgcaaggaattcagtatctgtggaaccaatgtgctgagcatgctctggcagataatatcgagctagctgagaagttgctgactcgctggtttgaagaatatggaaaagatggtgatattcaaagtggtggtgctactagaccaatggagatcagcaatgaagagtctgtacggtcatcagtttcctctatacaagaagttggttctggtacatctacatcagaggatcaaatcttttggctattaaacctctcattatacaggacgatagagaacaatctacaggaagcaaaagttgctatggacaaagcattgaagttagcacatggggagagctatgagcactgtataaaggaacatgctgcaattcacacactggagaaaacgtcatcatctacagatgttcaaactcaagcaaccttcagtcttatcagtggttatcttgtagatcaacggaacttgcccgtgagggatctgctgtcaagaaggtttatgaagaatgttaagaagcacaggcttaagcggttgatagatgagactataggcccaacttccgcgaatcctgctctgataaactctgtcctcgaggtgtgctacggtccatctctccttccagaaacgataggtgaagttaagtacctggtcgattttgttgaatcagtgatggaggttcttcctgcaaactaccgtctggccttggcggttggtaaattcatggttaagcattgcacaggtgatgactctatttccatgggcacccgattctgggccagctccattctgatcaacgccattttccgagctgttcctgtcgcaccagaatcagtatggttagaaggtgccagtctccttgagaaacttcaggcagcagagaccgtgaagagattctaccagcaggcaacctcagtctacccgttctccttcaagctatggcactcttacttgaactcctgtaaggccagtgggagcagcacagagagcatcgccgaagctgcgaggcaacggggcatcgagctgagcgtaacgcctccctagcaggggccctcttggtttgatgacgtggcgattcgccaggtggagctgtagttagtgttgtgtttactggaaagtgagagtagatacacccggtggtgatggggcgactggataattttcttcttgtttaggcacaggtttagtgacacataggcggtggataccaaccataccatacatcacagcagctgctgttactgatggtgtgacttatggatcaaaaaaagaggatataggcatacggttttgcatgcccccacagagtggagttttggctgactcgagagtatgatgtttttgtaggcagatttcttgatctgtttcaggtttatgtttgtttaccctgttgcagtgtatggcatgcacaactgttgtttttttgaaacattatgatcgatcaatcatgaatgtgaatgagaattttgttaaacca

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