LOCUS       NM_001423879            3638 bp    mRNA    linear   PLN 17-AUG-2023
DEFINITION  Oryza sativa Japonica Group protein argonaute 1C-like (LOC4331253),
            mRNA.
ACCESSION   NM_001423879 XM_015770982
VERSION     NM_001423879.1
KEYWORDS    RefSeq.
SOURCE      Oryza sativa Japonica Group (Japanese rice)
  ORGANISM  Oryza sativa Japonica Group
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP
            clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa.
REFERENCE   1  (bases 1 to 3638)
  AUTHORS   Kikuchi S, Satoh K, Nagata T, Kawagashira N, Doi K, Kishimoto N,
            Yazaki J, Ishikawa M, Yamada H, Ooka H, Hotta I, Kojima K, Namiki
            T, Ohneda E, Yahagi W, Suzuki K, Li CJ, Ohtsuki K, Shishiki T,
            Otomo Y, Murakami K, Iida Y, Sugano S, Fujimura T, Suzuki Y,
            Tsunoda Y, Kurosaki T, Kodama T, Masuda H, Kobayashi M, Xie Q, Lu
            M, Narikawa R, Sugiyama A, Mizuno K, Yokomizo S, Niikura J, Ikeda
            R, Ishibiki J, Kawamata M, Yoshimura A, Miura J, Kusumegi T, Oka M,
            Ryu R, Ueda M, Matsubara K, Kawai J, Carninci P, Adachi J, Aizawa
            K, Arakawa T, Fukuda S, Hara A, Hashizume W, Hayatsu N, Imotani K,
            Ishii Y, Itoh M, Kagawa I, Kondo S, Konno H, Miyazaki A, Osato N,
            Ota Y, Saito R, Sasaki D, Sato K, Shibata K, Shinagawa A, Shiraki
            T, Yoshino M, Hayashizaki Y and Yasunishi A.
  CONSRTM   Rice Full-Length cDNA Consortium; National Institute of
            Agrobiological Sciences Rice Full-Length cDNA Project Team;
            Foundation of Advancement of International Science Genome
            Sequencing & Analysis Group; RIKEN
  TITLE     Collection, mapping, and annotation of over 28,000 cDNA clones from
            japonica rice
  JOURNAL   Science 301 (5631), 376-379 (2003)
   PUBMED   12869764
  REMARK    Erratum:[Science. 2003 Sep;301(5641):1849]
REFERENCE   2  (bases 1 to 3638)
  AUTHORS   Nishimura A, Ito M, Kamiya N, Sato Y and Matsuoka M.
  TITLE     OsPNH1 regulates leaf development and maintenance of the shoot
            apical meristem in rice
  JOURNAL   Plant J 30 (2), 189-201 (2002)
   PUBMED   12000455
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            CI748264.1, AK103279.1, AB081951.1, CI273620.1, CI531441.1 and
            CI393263.1.
            
            On Aug 17, 2023 this sequence version replaced XM_015770982.2.
            
            ##Evidence-Data-START##
            Transcript exon combination :: AK103279.1 [ECO:0000332]
            RNAseq introns              :: mixed sample support SAMD00008650,
                                           SAMD00020310 [ECO:0006172]
            ##Evidence-Data-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-349               CI748264.1         2-350
            350-1063            AK103279.1         335-1048
            1064-1237           AB081951.1         900-1073
            1238-1916           AK103279.1         1223-1901
            1917-2056           AB081951.1         1753-1892
            2057-2725           AK103279.1         2042-2710
            2726-2824           AB081951.1         2562-2660
            2825-3295           CI273620.1         1-471
            3296-3398           CI531441.1         252-354
            3399-3638           CI393263.1         197-436
FEATURES             Location/Qualifiers
     source          1..3638
                     /organism="Oryza sativa Japonica Group"
                     /mol_type="mRNA"
                     /db_xref="taxon:39947"
                     /chromosome="2"
                     /map="2"
     gene            1..3638
                     /gene="LOC4331253"
                     /gene_synonym="AGO1; AGO1C; OJ1149_C12.13; OsAGO1;
                     OsAGO1c; OsJ_08998"
                     /note="protein argonaute 1C-like"
                     /db_xref="GeneID:4331253"
     exon            1..135
                     /gene="LOC4331253"
                     /gene_synonym="AGO1; AGO1C; OJ1149_C12.13; OsAGO1;
                     OsAGO1c; OsJ_08998"
                     /inference="alignment:Splign:2.1.0"
     exon            136..686
                     /gene="LOC4331253"
                     /gene_synonym="AGO1; AGO1C; OJ1149_C12.13; OsAGO1;
                     OsAGO1c; OsJ_08998"
                     /inference="alignment:Splign:2.1.0"
     CDS             159..3194
                     /gene="LOC4331253"
                     /gene_synonym="AGO1; AGO1C; OJ1149_C12.13; OsAGO1;
                     OsAGO1c; OsJ_08998"
                     /note="AGO1 homologous protein; LOC_Os02g58490; Protein
                     argonaute 1"
                     /codon_start=1
                     /product="protein argonaute 1C"
                     /protein_id="NP_001410808.1"
                     /db_xref="GeneID:4331253"
                     /translation="

MASRRPTHRHHTEAPDPGGRGRGRGRAARYAQPQPQPQQQQQQQGRGCRARGASPPPPPQQQQQQQPRSTPTRATTVTVASSSSTTATASSSPLAPELRQAIMEAPRPSELAQPSPTPPQEQPVDAATTTPHHIPSSSKSIRFPLRPGKGTIGTRCMVKANHFFAHLPNKDLHHYDVSITPEVTSRIVNRAVIKELVNLYKASYLGGRLPAYDGRKSLYTAGPLPFTSQEFQITLLDDDDGSGSERRQRTFRVVIKFAARADLHRLELFLAGRHAEAPQEALQVLDIVLRELPSARYAPFGRSFFSPYLGRRQPLGEGLESWRGFYQSIRPTQMGLSLNIDMSATAFIEPLPVIDFVAQLLNSDIHSRPLSDAERVKIKKALRGVKVEVTHRGNMRRKYRISGLTIQPTRELTFPVDEGGTVKSVVQYFQETYGFAIQHTYLPCLTVQRLNYLPMEVCKIVEGQRYSKRLNQNQIRALLEETCQHPRDRERDIIKMVKHNAYQDDPYAKEFGIKISDRLASVEARILPAPRLKYNETGREKDCLPRVGQWNMMNKKMVNGGKVRSWMCVNFARNVQESVVRGFCHELALMCQASGMDFAPEPILPPLNAHPDQVERALKARYHDAMNVLGPQRRELDLLIGILPDNNGSLYGDLKRVCEIDLGIVSQCCCTKQVFKMNKQILANLALKINVKVGGRNTVLVDAVSRRIPLVTDRPTIIFGADVTHPHPGEDSSPSIAAVVASQDWPEVTKYAGLVSAQAHRQELIEDLYKIWQDPQRGTVSGGMIRELLISFKRSTGEKPQRIIFYRDGVSEGQFYQVLLYELNAIRKACASLETNYQPKVTFIVVQKRHHTRLFAHNHNDQNSVDRSGNILPGTVVDSKICHPTEFDFYLCSHAGIKGTSRPAHYHVLWDENNFTADALQILTNNLCYTYARCTRSVSIVPPAYYAHLAAFRARFYMEPDTSDSSSVVSGPGVRGPLSGSSTSRTRAPGGAAVKPLPALKDSVKRVMFYC"

     misc_feature    159..443
                     /gene="LOC4331253"
                     /gene_synonym="AGO1; AGO1C; OJ1149_C12.13; OsAGO1;
                     OsAGO1c; OsJ_08998"
                     /note="propagated from UniProtKB/Swiss-Prot (Q6K972.1);
                     Region: Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite"
     misc_feature    477..599
                     /gene="LOC4331253"
                     /gene_synonym="AGO1; AGO1C; OJ1149_C12.13; OsAGO1;
                     OsAGO1c; OsJ_08998"
                     /note="propagated from UniProtKB/Swiss-Prot (Q6K972.1);
                     Region: Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite"
     misc_feature    492..3191
                     /gene="LOC4331253"
                     /gene_synonym="AGO1; AGO1C; OJ1149_C12.13; OsAGO1;
                     OsAGO1c; OsJ_08998"
                     /note="protein argonaute; Provisional; Region: PLN03202"
                     /db_xref="CDD:215631"
     misc_feature    3045..3140
                     /gene="LOC4331253"
                     /gene_synonym="AGO1; AGO1C; OJ1149_C12.13; OsAGO1;
                     OsAGO1c; OsJ_08998"
                     /note="propagated from UniProtKB/Swiss-Prot (Q6K972.1);
                     Region: Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite"
     exon            687..895
                     /gene="LOC4331253"
                     /gene_synonym="AGO1; AGO1C; OJ1149_C12.13; OsAGO1;
                     OsAGO1c; OsJ_08998"
                     /inference="alignment:Splign:2.1.0"
     exon            896..1045
                     /gene="LOC4331253"
                     /gene_synonym="AGO1; AGO1C; OJ1149_C12.13; OsAGO1;
                     OsAGO1c; OsJ_08998"
                     /inference="alignment:Splign:2.1.0"
     exon            1046..1179
                     /gene="LOC4331253"
                     /gene_synonym="AGO1; AGO1C; OJ1149_C12.13; OsAGO1;
                     OsAGO1c; OsJ_08998"
                     /inference="alignment:Splign:2.1.0"
     exon            1180..1289
                     /gene="LOC4331253"
                     /gene_synonym="AGO1; AGO1C; OJ1149_C12.13; OsAGO1;
                     OsAGO1c; OsJ_08998"
                     /inference="alignment:Splign:2.1.0"
     exon            1290..1396
                     /gene="LOC4331253"
                     /gene_synonym="AGO1; AGO1C; OJ1149_C12.13; OsAGO1;
                     OsAGO1c; OsJ_08998"
                     /inference="alignment:Splign:2.1.0"
     exon            1397..1526
                     /gene="LOC4331253"
                     /gene_synonym="AGO1; AGO1C; OJ1149_C12.13; OsAGO1;
                     OsAGO1c; OsJ_08998"
                     /inference="alignment:Splign:2.1.0"
     exon            1527..1643
                     /gene="LOC4331253"
                     /gene_synonym="AGO1; AGO1C; OJ1149_C12.13; OsAGO1;
                     OsAGO1c; OsJ_08998"
                     /inference="alignment:Splign:2.1.0"
     exon            1644..1751
                     /gene="LOC4331253"
                     /gene_synonym="AGO1; AGO1C; OJ1149_C12.13; OsAGO1;
                     OsAGO1c; OsJ_08998"
                     /inference="alignment:Splign:2.1.0"
     exon            1752..1823
                     /gene="LOC4331253"
                     /gene_synonym="AGO1; AGO1C; OJ1149_C12.13; OsAGO1;
                     OsAGO1c; OsJ_08998"
                     /inference="alignment:Splign:2.1.0"
     exon            1824..1946
                     /gene="LOC4331253"
                     /gene_synonym="AGO1; AGO1C; OJ1149_C12.13; OsAGO1;
                     OsAGO1c; OsJ_08998"
                     /inference="alignment:Splign:2.1.0"
     exon            1947..2112
                     /gene="LOC4331253"
                     /gene_synonym="AGO1; AGO1C; OJ1149_C12.13; OsAGO1;
                     OsAGO1c; OsJ_08998"
                     /inference="alignment:Splign:2.1.0"
     exon            2113..2234
                     /gene="LOC4331253"
                     /gene_synonym="AGO1; AGO1C; OJ1149_C12.13; OsAGO1;
                     OsAGO1c; OsJ_08998"
                     /inference="alignment:Splign:2.1.0"
     exon            2235..2372
                     /gene="LOC4331253"
                     /gene_synonym="AGO1; AGO1C; OJ1149_C12.13; OsAGO1;
                     OsAGO1c; OsJ_08998"
                     /inference="alignment:Splign:2.1.0"
     exon            2373..2515
                     /gene="LOC4331253"
                     /gene_synonym="AGO1; AGO1C; OJ1149_C12.13; OsAGO1;
                     OsAGO1c; OsJ_08998"
                     /inference="alignment:Splign:2.1.0"
     exon            2516..2578
                     /gene="LOC4331253"
                     /gene_synonym="AGO1; AGO1C; OJ1149_C12.13; OsAGO1;
                     OsAGO1c; OsJ_08998"
                     /inference="alignment:Splign:2.1.0"
     exon            2579..2642
                     /gene="LOC4331253"
                     /gene_synonym="AGO1; AGO1C; OJ1149_C12.13; OsAGO1;
                     OsAGO1c; OsJ_08998"
                     /inference="alignment:Splign:2.1.0"
     exon            2643..2778
                     /gene="LOC4331253"
                     /gene_synonym="AGO1; AGO1C; OJ1149_C12.13; OsAGO1;
                     OsAGO1c; OsJ_08998"
                     /inference="alignment:Splign:2.1.0"
     exon            2779..2852
                     /gene="LOC4331253"
                     /gene_synonym="AGO1; AGO1C; OJ1149_C12.13; OsAGO1;
                     OsAGO1c; OsJ_08998"
                     /inference="alignment:Splign:2.1.0"
     exon            2853..2947
                     /gene="LOC4331253"
                     /gene_synonym="AGO1; AGO1C; OJ1149_C12.13; OsAGO1;
                     OsAGO1c; OsJ_08998"
                     /inference="alignment:Splign:2.1.0"
     exon            2948..2979
                     /gene="LOC4331253"
                     /gene_synonym="AGO1; AGO1C; OJ1149_C12.13; OsAGO1;
                     OsAGO1c; OsJ_08998"
                     /inference="alignment:Splign:2.1.0"
     exon            2980..3638
                     /gene="LOC4331253"
                     /gene_synonym="AGO1; AGO1C; OJ1149_C12.13; OsAGO1;
                     OsAGO1c; OsJ_08998"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      

gtgctccactcccctcgtcttcttccttcctcggcccggcctcgctcgctgcctgccagctgcagctgcaactctccatccatcgatcgatctcctcctactcccccgccgccgccccgtccaagacaagccaagccagccaccactccctgcatgccatggcctcacggaggccaacgcaccgccaccataccgaggctccagatcctggtggaagagggagagggagaggccgtgccgcccgatatgctcagcctcagcctcagcctcagcagcagcagcagcagcaaggacgaggatgccgtgctagaggtgcctcgccgccgccgccgccgcagcagcagcagcagcaacagccaaggtctactcctactcgtgctaccactgtcaccgtggcttcctcttcatctaccacggccaccgcatcatcaagccctctagctcccgagctgcgccaagcaataatggaagctccccgtcccagtgagctcgctcaaccctcacccactccgcctcaggaacaacctgtggatgccgctaccacgacgccgcaccatattccatcctcaagcaagtcaattaggtttcctttgcgcccggggaagggtaccattggcaccaggtgcatggtcaaggccaatcatttcttcgctcacctgcccaacaaggatcttcatcactacgatgtctccatcactccagaagttacatcacgcattgttaaccgagctgtgatcaaggagctggtaaatctgtacaaggcatcttatctgggtgggaggctgcctgcatatgatggtagaaagagcttatacacggctggcccattgccgtttacttcacaggagtttcagatcactttacttgacgacgatgatggttctggttctgagaggcgacagaggactttccgagtagtaatcaagttcgccgcacgggccgaccttcaccggcttgagttgtttttagctgggaggcacgcagaagctccacaggaggcactgcaagttcttgatattgtgctgcgagagctaccatcagcaagatatgcgccatttggacgttccttcttttcgccttacttgggtaggaggcaaccccttggtgagggattggaaagctggcgtggattttaccagagcattcggcctactcagatgggcttatcactgaatattgatatgtcagctacagctttcattgagccgttacctgttattgattttgttgcacaactattgaattctgacatccattcaaggccgctttctgatgccgaacgtgttaagatcaagaaagccttgagaggagtaaaggtggaagttacccaccgtggcaacatgaggcggaagtaccggatatctggtttgacaattcagccaactcgtgagctaacttttcctgttgatgaaggaggcacagtgaagtcagttgtacagtactttcaagagacatatggctttgccatccaacacacctaccttccatgccttacagttcagcgattaaattacctgcctatggaggtctgcaaaatagtggaaggacagagatactccaagagattaaatcagaatcagataagagctcttttggaggagacatgccaacacccacgtgatcgggagcgtgatattattaagatggttaaacataacgcttatcaggatgatccttacgcaaaagagtttggcattaagataagtgatcgtctggcatcagtagaggcacgaattttaccggctccacggcttaagtacaatgagactggtcgagagaaggattgcttaccaagagttggtcaatggaatatgatgaacaagaaaatggtaaatggtggtaaagtcagaagctggatgtgcgtcaattttgcccgtaatgtgcaggaaagtgttgttcgtgggttctgccatgaacttgctctgatgtgtcaagcctcaggaatggatttcgctccagaacctattcttccaccactaaatgcacatccagatcaagtggagcgtgctctaaaagctaggtatcatgatgcaatgaacgttcttggaccccagcgcagggaacttgatttgcttattgggatactacctgataacaatggctcgctttatggtgatttgaagcgcgtgtgtgaaatagatcttggaatagtttcacaatgctgttgcacgaagcaggtgttcaaaatgaacaaacaaattcttgcaaatcttgctctgaagataaatgtcaaggttgggggcaggaacactgtgctggtggatgctgtgtcaaggcgtattcctctggtaaccgacagacctacaattatatttggtgctgatgttacccatcctcatcctggagaggacagcagtccctcaattgctgctgttgtagcctcccaagattggcctgaggtgacaaagtatgctgggttggtttctgctcaagcccaccgacaagagctgatagaagatctatataaaatctggcaggatccacagagaggaacagttagtggtggcatgatccgtgagctgcttatatccttcaaaagatcaactggtgagaagccccagcgaataatattttacagggatggcgttagtgaaggccaattttaccaagttctactttatgaattgaatgcaatccgaaaagcatgtgcctccctggagacaaattaccaaccaaaggtgactttcattgtggttcagaaacgtcaccacacaagattatttgcacataatcacaacgatcagaactcagttgacaggagcgggaacatactccctggtacggttgtagattcaaagatctgtcatccaactgagtttgacttctacctgtgtagccatgctggcattaagggtactagtcgtccagctcattatcatgtcttgtgggatgaaaacaacttcacagctgatgcattgcagattcttaccaacaacctttgctacacctatgcaaggtgcactcgctctgtatcaattgttccacctgcttattatgctcatctggctgccttccgtgctcgtttctatatggaaccagatacatctgacagcagctctgtcgttagtgggcctggtgtacgtgggccactttctggctcatcaacatcacgtactcgggcccctggtggtgcagctgttaagccacttcctgctctgaaggatagtgtgaagagggtcatgttctactgctgaagctagggcctacatagctaaagctcttcgtttcttggcaacctgcctatgatggttgtaattatgtgtcaaaaaatcccataataatctgccagctgctatcttctccattgtactatgctggtcatgtttgccaaagttaccctatatgtatgtatattatgctattgttttttttttttgcggggactattgttatcatgtattatgttttactgtcatgtctgtagttatgattcgaggagtttgcgactgggcttgagcatttcatcttagttttttcttgctagaaattagtacttgtgtcccgtacatgtaggagtttagagtgatgagttttatatgtgctccaggcatactatttataagtagtcagtgctaccaagtatgttaatctttttattattcccacagtaatcatttattaaatcttcacaatcaatg

//