LOCUS       NM_001422508            1262 bp    mRNA    linear   PLN 15-JUN-2023
DEFINITION  Oryza sativa Japonica Group WUSCHEL-related homeobox 10-like
            (LOC4345042), mRNA.
ACCESSION   NM_001422508 XM_015794156
VERSION     NM_001422508.1
KEYWORDS    RefSeq.
SOURCE      Oryza sativa Japonica Group (Japanese rice)
  ORGANISM  Oryza sativa Japonica Group
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP
            clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa.
REFERENCE   1  (bases 1 to 1262)
  AUTHORS   Kikuchi S, Satoh K, Nagata T, Kawagashira N, Doi K, Kishimoto N,
            Yazaki J, Ishikawa M, Yamada H, Ooka H, Hotta I, Kojima K, Namiki
            T, Ohneda E, Yahagi W, Suzuki K, Li CJ, Ohtsuki K, Shishiki T,
            Otomo Y, Murakami K, Iida Y, Sugano S, Fujimura T, Suzuki Y,
            Tsunoda Y, Kurosaki T, Kodama T, Masuda H, Kobayashi M, Xie Q, Lu
            M, Narikawa R, Sugiyama A, Mizuno K, Yokomizo S, Niikura J, Ikeda
            R, Ishibiki J, Kawamata M, Yoshimura A, Miura J, Kusumegi T, Oka M,
            Ryu R, Ueda M, Matsubara K, Kawai J, Carninci P, Adachi J, Aizawa
            K, Arakawa T, Fukuda S, Hara A, Hashizume W, Hayatsu N, Imotani K,
            Ishii Y, Itoh M, Kagawa I, Kondo S, Konno H, Miyazaki A, Osato N,
            Ota Y, Saito R, Sasaki D, Sato K, Shibata K, Shinagawa A, Shiraki
            T, Yoshino M, Hayashizaki Y and Yasunishi A.
  CONSRTM   Rice Full-Length cDNA Consortium; National Institute of
            Agrobiological Sciences Rice Full-Length cDNA Project Team;
            Foundation of Advancement of International Science Genome
            Sequencing & Analysis Group; RIKEN
  TITLE     Collection, mapping, and annotation of over 28,000 cDNA clones from
            japonica rice
  JOURNAL   Science 301 (5631), 376-379 (2003)
   PUBMED   12869764
  REMARK    Erratum:[Science. 2003 Sep;301(5641):1849]
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AK107305.1, AP014964.1 and CI112465.1.
            
            On Jun 15, 2023 this sequence version replaced XM_015794156.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: AK107305.1, CI112465.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMD00020318, SAMN05224561
                                           [ECO:0000348]
            ##Evidence-Data-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-368               AK107305.1         1-368
            369-371             AP014964.1         8640390-8640392     c
            372-820             AK107305.1         372-820
            821-1262            CI112465.1         1-442
FEATURES             Location/Qualifiers
     source          1..1262
                     /organism="Oryza sativa Japonica Group"
                     /mol_type="mRNA"
                     /db_xref="taxon:39947"
                     /chromosome="8"
                     /map="8"
     gene            1..1262
                     /gene="LOC4345042"
                     /gene_synonym="OsJ_025487; OsWOX10; WOX10"
                     /note="WUSCHEL-related homeobox 10-like"
                     /db_xref="GeneID:4345042"
     exon            1..837
                     /gene="LOC4345042"
                     /gene_synonym="OsJ_025487; OsWOX10; WOX10"
                     /inference="alignment:Splign:2.1.0"
     misc_feature    147..149
                     /gene="LOC4345042"
                     /gene_synonym="OsJ_025487; OsWOX10; WOX10"
                     /note="upstream in-frame stop codon"
     CDS             180..1034
                     /gene="LOC4345042"
                     /gene_synonym="OsJ_025487; OsWOX10; WOX10"
                     /note="OSJNBa0087F21.36; putative homeodomain protein;
                     LOC_Os08g14400; Protein WOX11/12"
                     /codon_start=1
                     /product="WUSCHEL-related homeobox 10"
                     /protein_id="NP_001409437.1"
                     /db_xref="GeneID:4345042"
                     /translation="

MDRTATASWEVMSRRGEQQQQLMMQAPASHNGGSGGGEPARSRWAPKPEQILILESIFNSGMVNPAKDETARIRRLLERFGAVRDANVFYWFQNRRSRSRRRARQLQQACGAALHQLPSAAAAAGAGGGGDYYHHHHQPSSSPFLMHGGGGGGVVTSTTAAPAVAASGHFLADEVDGGGDDDLFAISRQMGLMARHGGGDHHYSSYADSDATQLSYQPTGTIQVFINGVAYDVPSGGALDMAGTFGRDAMLVHSSGEVLPVDEHGVLINSLQMGECYYLVSKSI"

     misc_feature    180..308
                     /gene="LOC4345042"
                     /gene_synonym="OsJ_025487; OsWOX10; WOX10"
                     /note="propagated from UniProtKB/Swiss-Prot (Q6Z3L4.1);
                     Region: Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite"
     exon            838..1016
                     /gene="LOC4345042"
                     /gene_synonym="OsJ_025487; OsWOX10; WOX10"
                     /inference="alignment:Splign:2.1.0"
     exon            1017..1248
                     /gene="LOC4345042"
                     /gene_synonym="OsJ_025487; OsWOX10; WOX10"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      

attaagcttgaattgctgctcccttgggcgcatgtgtgtcaccctctccttccattgatcctttcacatcctttaatttctctctttcttccacaacaaatcaaactgttcatcctccccttcacctttgacctttccaacctaattaattagctactacccaattagccgatccatccatggaccgcactgcgactgcaagctgggaggtcatgagccggcgaggtgagcagcagcagcagctgatgatgcaagctccggccagccataatggtggcagcggcggcggcgagccggcgaggtcgcggtgggcgccgaagccggagcagatcctgatactggagtccatcttcaacagcggcatggtgaacccggccaaggacgagacggcgcgcatccgccgcctcctcgagcgcttcggcgccgtccgcgacgccaacgtcttctactggttccagaaccgccgctcccgctcccgccgccgcgcccgccagctccagcaagcctgcggcgccgccctccatcagctcccctccgccgccgccgccgccggagccggaggaggaggagattactatcaccaccaccaccaaccttcgtcttctcctttcctcatgcacggcggtggcggcggcggcgtggtcacttcgacgaccgcggcgccagcggtggcggcgtccggccacttcttggcggacgaggtcgacggcggcggcgacgacgacctcttcgccatctcccggcagatgggcctcatggctcgccacggcggcggcgaccaccattacagcagctacgcggacagcgacgccacccagctcagctaccaaccaaccgggacgatccaagtgttcatcaatggcgtcgcatacgatgtgccgagcggcggagcgctggacatggccggcacgtttggccgcgacgccatgctggtgcactcctccggcgaggtccttccggtggacgagcacggcgtgctcatcaacagcttgcagatgggggagtgctactacctggtttcaaaatcgatctgattaatcggatggatgaaggtggagaagaagatgcaagatttatgtatgctcttgtaagcatgcgggatttgcttcattgattaattgggagattgattcccagctccatgaattgttgttaattaggttgtccagggatcatatcagtgtgtactaatgtggttgatttctctccatcgatgtatattattatctcgatgcatcgtccccttgaaaaaaaaaaaaaaa

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