LOCUS       NM_001422151            3833 bp    mRNA    linear   PLN 01-JUN-2023
DEFINITION  Oryza sativa Japonica Group protein argonaute 18-like (LOC4343201),
            mRNA.
ACCESSION   NM_001422151 XM_015789430
VERSION     NM_001422151.1
KEYWORDS    RefSeq.
SOURCE      Oryza sativa Japonica Group (Japanese rice)
  ORGANISM  Oryza sativa Japonica Group
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP
            clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa.
REFERENCE   1  (bases 1 to 3833)
  AUTHORS   Kikuchi S, Satoh K, Nagata T, Kawagashira N, Doi K, Kishimoto N,
            Yazaki J, Ishikawa M, Yamada H, Ooka H, Hotta I, Kojima K, Namiki
            T, Ohneda E, Yahagi W, Suzuki K, Li CJ, Ohtsuki K, Shishiki T,
            Otomo Y, Murakami K, Iida Y, Sugano S, Fujimura T, Suzuki Y,
            Tsunoda Y, Kurosaki T, Kodama T, Masuda H, Kobayashi M, Xie Q, Lu
            M, Narikawa R, Sugiyama A, Mizuno K, Yokomizo S, Niikura J, Ikeda
            R, Ishibiki J, Kawamata M, Yoshimura A, Miura J, Kusumegi T, Oka M,
            Ryu R, Ueda M, Matsubara K, Kawai J, Carninci P, Adachi J, Aizawa
            K, Arakawa T, Fukuda S, Hara A, Hashizume W, Hayatsu N, Imotani K,
            Ishii Y, Itoh M, Kagawa I, Kondo S, Konno H, Miyazaki A, Osato N,
            Ota Y, Saito R, Sasaki D, Sato K, Shibata K, Shinagawa A, Shiraki
            T, Yoshino M, Hayashizaki Y and Yasunishi A.
  CONSRTM   Rice Full-Length cDNA Consortium; National Institute of
            Agrobiological Sciences Rice Full-Length cDNA Project Team;
            Foundation of Advancement of International Science Genome
            Sequencing & Analysis Group; RIKEN
  TITLE     Collection, mapping, and annotation of over 28,000 cDNA clones from
            japonica rice
  JOURNAL   Science 301 (5631), 376-379 (2003)
   PUBMED   12869764
  REMARK    Erratum:[Science. 2003 Sep;301(5641):1849]
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AK111455.1, AK069685.1, AP014963.1 and CI371686.1.
            
            On Jun 1, 2023 this sequence version replaced XM_015789430.2.
            
            ##Evidence-Data-START##
            RNAseq introns :: single sample supports all introns SAMD00008650,
                              SAMD00020311 [ECO:0000348]
            ##Evidence-Data-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-1164              AK111455.1         523-1686            c
            1165-1332           AK111455.1         274-441             c
            1333-1826           AK069685.1         1-494
            1827-1829           AP014963.1         16895521-16895523
            1830-2036           AK069685.1         498-704
            2037-2058           AP014963.1         16895956-16895977
            2059-3276           AK069685.1         727-1944
            3277-3776           AK069685.1         1946-2445
            3777-3833           CI371686.1         390-446
FEATURES             Location/Qualifiers
     source          1..3833
                     /organism="Oryza sativa Japonica Group"
                     /mol_type="mRNA"
                     /db_xref="taxon:39947"
                     /chromosome="7"
                     /map="7"
     gene            1..3833
                     /gene="LOC4343201"
                     /gene_synonym="AGO18; OJ1103_E04.115; OsAGO18"
                     /note="protein argonaute 18-like"
                     /db_xref="GeneID:4343201"
     exon            1..1164
                     /gene="LOC4343201"
                     /gene_synonym="AGO18; OJ1103_E04.115; OsAGO18"
                     /inference="alignment:Splign:2.1.0"
     misc_feature    211..213
                     /gene="LOC4343201"
                     /gene_synonym="AGO18; OJ1103_E04.115; OsAGO18"
                     /note="upstream in-frame stop codon"
     CDS             298..3564
                     /gene="LOC4343201"
                     /gene_synonym="AGO18; OJ1103_E04.115; OsAGO18"
                     /note="putative leaf development protein Argonaute;
                     P0675B10.105; LOC_Os07g28850"
                     /codon_start=1
                     /product="protein argonaute 18"
                     /protein_id="NP_001409080.1"
                     /db_xref="GeneID:4343201"
                     /translation="

MASRGGGQHQRHQQQQQQPGGYGRGGGGGRGRGRDGAPYSGGRGRGQDGSYPGGRGGGYGGGGGGGGPPYYGGGGGGGGGGGGQGRGYYDDGGDGRGYQRGMEGGGGRGGYRGDGDGGYGRGGGGYHGDGERGYGRGGGGGGGGGGGYRGDDEGRSSYGRARGGGGGGGGYHGDGEAGYGRGRGGRDYDGGRGGGGRRGGRGGGGSSYHQQPPPDLPQAPEPRLAAQYAREIDIAALRAQFKGLTTTTPGAASSQFPARPGFGAAGEECLVKVNHFFVGLKNDNFHHYDVAIAPDPVLKGLFRTIISKLVTERRHTDFGGRLPVYDGRANLYTAGELPFRSRELEVELSGSRKFKVAIRHVAPVSLQDLRMVMAGCPAGIPSQALQLLDIVLRDMVLAERNDMGYVAFGRSYFSPGLGSRELDKGIFAWKGFYQSCRVTQQGLSLNIDMSSTAFIEPGRVLNFVEKAIGRRITNAITVGYFLNNYGNELMRTLKGVKVEVTHRGNLRKKYRIAGFTEQSADVQTFTSSDGIKTVKEYFNKKYNLKLAFGYLPCLQVGSKERPNYLPMELCNIVPGQRYKNRLSPTQVSNLINITNDRPCDRESSIRQTVSSNQYNSTERADEFGIEVDSYPTTLKARVLKAPMLKYHDSGRVRVCTPEDGAWNMKDKKVVNGATIKSWACVNLCEGLDNRVVEAFCLQLVRTSKITGLDFANVSLPILKADPHNVKTDLPMRYQEACSWSRDNKIDLLLVVMTDDKNNASLYGDVKRICETEIGVLSQCCRAKQVYKERNVQYCANVALKINAKAGGRNSVFLNVEASLPVVSKSPTIIFGADVTHPGSFDESTPSIASVVASADWPEVTKYNSVVRMQASRKEIIQDLDSIVRELLNAFKRDSKMEPKQLIFYRDGVSEGQFQQVVESEIPEIEKAWKSLYAGKPRITFIVVQKRHHTRLFPNNYNDPRGMDGTGNVRPGTVVDTVICHPREFDFFLCSQAGIKGTSRPSHYHVLRDDNNFTADQLQSVTNNLCYLYTSCTRSVSIPPPVYYAHKLAFRARFYLTQVPVAGGDPGAAKFQWVLPEIKEEVKKSMFFC"

     misc_feature    298..957
                     /gene="LOC4343201"
                     /gene_synonym="AGO18; OJ1103_E04.115; OsAGO18"
                     /note="propagated from UniProtKB/Swiss-Prot (Q69UP6.1);
                     Region: Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite"
     misc_feature    931..3561
                     /gene="LOC4343201"
                     /gene_synonym="AGO18; OJ1103_E04.115; OsAGO18"
                     /note="protein argonaute; Provisional; Region: PLN03202"
                     /db_xref="CDD:215631"
     misc_feature    2155..3462
                     /gene="LOC4343201"
                     /gene_synonym="AGO18; OJ1103_E04.115; OsAGO18"
                     /note="PIWI domain, Argonaute-like subfamily. Argonaute is
                     the central component of the RNA-induced silencing complex
                     (RISC) and related complexes. The PIWI domain is the
                     C-terminal portion of Argonaute and consists of two
                     subdomains, one of which provides the...; Region:
                     Piwi_ago-like; cd04657"
                     /db_xref="CDD:240015"
     misc_feature    order(2581..2583,2593..2595,2629..2640,2647..2649,
                     2674..2676,2683..2685,2695..2697,2707..2709)
                     /gene="LOC4343201"
                     /gene_synonym="AGO18; OJ1103_E04.115; OsAGO18"
                     /note="5' RNA guide strand anchoring site [active]"
                     /db_xref="CDD:240015"
     misc_feature    order(2794..2796,2800..2802,3013..3015,3430..3432)
                     /gene="LOC4343201"
                     /gene_synonym="AGO18; OJ1103_E04.115; OsAGO18"
                     /note="active site"
                     /db_xref="CDD:240015"
     exon            1165..1508
                     /gene="LOC4343201"
                     /gene_synonym="AGO18; OJ1103_E04.115; OsAGO18"
                     /inference="alignment:Splign:2.1.0"
     exon            1509..1639
                     /gene="LOC4343201"
                     /gene_synonym="AGO18; OJ1103_E04.115; OsAGO18"
                     /inference="alignment:Splign:2.1.0"
     exon            1640..1761
                     /gene="LOC4343201"
                     /gene_synonym="AGO18; OJ1103_E04.115; OsAGO18"
                     /inference="alignment:Splign:2.1.0"
     exon            1762..1868
                     /gene="LOC4343201"
                     /gene_synonym="AGO18; OJ1103_E04.115; OsAGO18"
                     /inference="alignment:Splign:2.1.0"
     exon            1869..2001
                     /gene="LOC4343201"
                     /gene_synonym="AGO18; OJ1103_E04.115; OsAGO18"
                     /inference="alignment:Splign:2.1.0"
     exon            2002..2118
                     /gene="LOC4343201"
                     /gene_synonym="AGO18; OJ1103_E04.115; OsAGO18"
                     /inference="alignment:Splign:2.1.0"
     exon            2119..2226
                     /gene="LOC4343201"
                     /gene_synonym="AGO18; OJ1103_E04.115; OsAGO18"
                     /inference="alignment:Splign:2.1.0"
     exon            2227..2298
                     /gene="LOC4343201"
                     /gene_synonym="AGO18; OJ1103_E04.115; OsAGO18"
                     /inference="alignment:Splign:2.1.0"
     exon            2299..2421
                     /gene="LOC4343201"
                     /gene_synonym="AGO18; OJ1103_E04.115; OsAGO18"
                     /inference="alignment:Splign:2.1.0"
     exon            2422..2584
                     /gene="LOC4343201"
                     /gene_synonym="AGO18; OJ1103_E04.115; OsAGO18"
                     /inference="alignment:Splign:2.1.0"
     exon            2585..2709
                     /gene="LOC4343201"
                     /gene_synonym="AGO18; OJ1103_E04.115; OsAGO18"
                     /inference="alignment:Splign:2.1.0"
     exon            2710..2844
                     /gene="LOC4343201"
                     /gene_synonym="AGO18; OJ1103_E04.115; OsAGO18"
                     /inference="alignment:Splign:2.1.0"
     exon            2845..2948
                     /gene="LOC4343201"
                     /gene_synonym="AGO18; OJ1103_E04.115; OsAGO18"
                     /inference="alignment:Splign:2.1.0"
     exon            2949..3011
                     /gene="LOC4343201"
                     /gene_synonym="AGO18; OJ1103_E04.115; OsAGO18"
                     /inference="alignment:Splign:2.1.0"
     exon            3012..3075
                     /gene="LOC4343201"
                     /gene_synonym="AGO18; OJ1103_E04.115; OsAGO18"
                     /inference="alignment:Splign:2.1.0"
     exon            3076..3208
                     /gene="LOC4343201"
                     /gene_synonym="AGO18; OJ1103_E04.115; OsAGO18"
                     /inference="alignment:Splign:2.1.0"
     exon            3209..3282
                     /gene="LOC4343201"
                     /gene_synonym="AGO18; OJ1103_E04.115; OsAGO18"
                     /inference="alignment:Splign:2.1.0"
     exon            3283..3377
                     /gene="LOC4343201"
                     /gene_synonym="AGO18; OJ1103_E04.115; OsAGO18"
                     /inference="alignment:Splign:2.1.0"
     exon            3378..3409
                     /gene="LOC4343201"
                     /gene_synonym="AGO18; OJ1103_E04.115; OsAGO18"
                     /inference="alignment:Splign:2.1.0"
     exon            3410..3833
                     /gene="LOC4343201"
                     /gene_synonym="AGO18; OJ1103_E04.115; OsAGO18"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      

gaaagaaacttatttggaacttggaaggtcttttcgctctttaggaaagcgcgcccgcttccatcccagaaaaatttccacgaaggccacgacccgcgtcgcgcgcgcccgtttccatcccagaaaattttcctgtataaataaataagacccacacgaagtccacgaaccgcgtcgcgtgggacccttccagaagcagagcccttcctgtagtcgtcgtcgtcgtcgtcgtctcctcttcgcgttgggtttgattcctcttcttctcgtctcccgcagcggcggccgtcgatcggaatggcgagccgaggaggaggccagcaccagcgccaccagcagcagcagcagcagcccggcgggtacggacgcggcggcggcggcggccgcgggcgcggccgggacggggcgccgtactcgggtggtcgtgggcgcggtcaggacggatcgtaccctggcggccgcggtgggggctatggcggtggtggtggtggaggtgggccgccgtactatggcggaggaggtggtggtggtggaggaggaggaggccaagggcgtgggtactatgatgatggcggcgatggccgcgggtaccagcggggcatggagggaggcggaggccgtggaggttatcgcggggacggcgatggtggctacggacgaggcggtggcggttatcacggggacggtgagcgtggctacggccgaggcggtggcggtggcggtggaggcggcggcggctatcgtggggatgacgagggtcgtagcagctacggccgagcccgtggcggtggcggtggcggtggcggctatcatggggacggcgaggctggatacggccgtggacgcggcggcagggactacgatggcggccgcggcggcggaggaagaagaggaggacgcggcggcggtggttcgagctaccaccagcagccgccccccgatctgccccaagctccggagccgcgcctcgccgcgcaatacgcccgcgagatcgacattgccgcgctccgggcgcagttcaaggggctgaccaccaccacccccggcgccgcgtcgtcgcagttcccggcgcggcctgggttcggcgccgccggagaggagtgcctcgtgaaggtcaaccacttcttcgtcggcctcaagaacgacaacttccaccactacgacgtggcgatcgcgccggatccggtgctgaagggcttgttccgcacgatcatctcgaagctggtgacggagcggcggcacaccgacttcggcggccgcctccccgtctacgacggccgcgccaacctctacaccgccggcgagctcccgttcaggagcagggagctcgaggtggagctgtccggcagcaggaagttcaaggtggccatccggcacgtcgcgccggtcagcctgcaggacctgcggatggtcatggccggctgccccgccggcatcccgtcgcaggcgctgcagctgctcgacatcgtgctgcgcgacatggtgctcgccgagcgcaacgacatggggtacgttgcgtttggtcggtcttacttctcaccggggctcggatcgagggaactcgacaagggcatctttgcgtggaaggggttctaccagagttgccgggtcacgcagcagggcctttctctgaacatagacatgtcttcgactgctttcattgaacctggtcgggtgctgaattttgtagaaaaagctattggacgtcgaatcactaatgctattactgtgggatattttttgaacaattatgggaatgaattgatgaggacccttaagggtgttaaggttgaagtcactcaccgaggaaatctacgcaagaagtaccgcattgctggcttcaccgagcagtctgcagatgttcagacgttcacatcatctgatggtatcaagactgtcaaggagtatttcaacaaaaaatacaatctgaagttagcttttggttatcttccatgcctgcaagttggcagcaaggagagaccgaattacctgcccatggagctttgcaatatagttcctggacaacgatacaagaaccggctcagtccgacacaggtttccaatctgattaacataaccaacgatcgtccttgtgaccgtgagagctccattcgtcagactgttagcagcaaccagtataacagtacggaacgcgcagatgagtttggcatagaagttgactcttatcctactactttaaaggctagagttttgaaagctccaatgctgaagtaccatgattctggaagggtgagagtatgcacgccagaggatggggcgtggaacatgaaagacaagaaagtagttaacggtgctacaattaaaagctgggcatgtgtcaacttgtgcgagggtttggataatcgtgttgttgaagcattctgccttcaattggtcagaacgtccaaaataactggactggactttgcgaatgtgagccttccaatattgaaagctgatcctcataatgttaaaactgatcttcctatgcgctatcaggaagcatgcagctggtcgagggataacaagattgacctcctacttgttgtaatgacagatgataaaaataatgccagcttatatggtgacgttaaaagaatctgtgaaacagaaatcggtgtattgtcacagtgttgtcgagcgaagcaagtctacaaggagaggaatgttcagtactgcgcaaatgttgctcttaagatcaatgccaaggctggaggaaggaactcggtatttcttaatgtagaagcaagtttaccggttgtttcaaagagcccaactattatatttggtgctgatgttacccatcctgggtcctttgatgaaagtaccccttccattgcttcggttgttgcttccgcagactggcctgaggtgaccaagtataattctgttgttcgtatgcaagcttctcgtaaggagattatacaagatcttgatagcattgttagggaacttctcaatgcattcaaaagggactccaagatggagccgaagcagctcattttctacagggacggcgtaagcgagggtcagttccagcaagttgtagagagcgaaataccggagatagaaaaggcttggaagtctctgtatgctggcaagccacgaattaccttcatagtggtgcagaagaggcatcatacaaggctgttccccaacaattacaatgatccacgcggcatggatgggactggaaatgttcgtccaggcacagtagttgatacagtgatctgtcaccctcgagagtttgatttcttcctgtgcagccaagccgggatcaaagggacaagccgtcctagccattaccatgtgctgcgcgacgacaacaacttcaccgcagatcagcttcagtctgtcacaaacaacctgtgctacttatatacaagctgcactcgctcggtgtctattccacctcctgtttactacgctcataagctcgcattccgcgctcgtttctacctcacccaagttcccgtcgccggtggagatccaggtgctgctaagttccagtgggtacttccagagattaaggaagaggtgaaaaagtccatgttcttttgctagtcgtccttgtgcccccctgaaactgaagcctggagccagccggcaagctctggaaatgctctgaataatcaaacttggaagaataagcacctgcccaggttgccattcgtttccatgtggcatggaggatggcatcctgaaaaggatattgtcatgtttgtgtggtttttaaacgacattgaagtttatctccggtgttactatctcagcactttggatgttttattttgttatgtctgaagatatagacacaaaacttcatttttgtt

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