LOCUS       NM_001409046            2030 bp    mRNA    linear   PLN 07-JUL-2022
DEFINITION  Oryza sativa Japonica Group shaggy-related protein kinase alpha
            (LOC4327108), transcript variant 1, mRNA.
ACCESSION   NM_001409046 XM_015755417
VERSION     NM_001409046.1
KEYWORDS    RefSeq.
SOURCE      Oryza sativa Japonica Group (Japanese rice)
  ORGANISM  Oryza sativa Japonica Group
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP
            clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa.
REFERENCE   1  (bases 1 to 2030)
  AUTHORS   Kikuchi S, Satoh K, Nagata T, Kawagashira N, Doi K, Kishimoto N,
            Yazaki J, Ishikawa M, Yamada H, Ooka H, Hotta I, Kojima K, Namiki
            T, Ohneda E, Yahagi W, Suzuki K, Li CJ, Ohtsuki K, Shishiki T,
            Otomo Y, Murakami K, Iida Y, Sugano S, Fujimura T, Suzuki Y,
            Tsunoda Y, Kurosaki T, Kodama T, Masuda H, Kobayashi M, Xie Q, Lu
            M, Narikawa R, Sugiyama A, Mizuno K, Yokomizo S, Niikura J, Ikeda
            R, Ishibiki J, Kawamata M, Yoshimura A, Miura J, Kusumegi T, Oka M,
            Ryu R, Ueda M, Matsubara K, Kawai J, Carninci P, Adachi J, Aizawa
            K, Arakawa T, Fukuda S, Hara A, Hashizume W, Hayatsu N, Imotani K,
            Ishii Y, Itoh M, Kagawa I, Kondo S, Konno H, Miyazaki A, Osato N,
            Ota Y, Saito R, Sasaki D, Sato K, Shibata K, Shinagawa A, Shiraki
            T, Yoshino M, Hayashizaki Y and Yasunishi A.
  CONSRTM   Rice Full-Length cDNA Consortium; National Institute of
            Agrobiological Sciences Rice Full-Length cDNA Project Team;
            Foundation of Advancement of International Science Genome
            Sequencing & Analysis Group; RIKEN
  TITLE     Collection, mapping, and annotation of over 28,000 cDNA clones from
            japonica rice
  JOURNAL   Science 301 (5631), 376-379 (2003)
   PUBMED   12869764
  REMARK    Erratum:[Science. 2003 Sep;301(5641):1849]
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            CI696974.1, AU082508.1, CB683361.1, CB673465.1, CB673466.1 and
            CI105739.1.
            
            On Jul 7, 2022 this sequence version replaced XM_015755417.2.
            
            ##Evidence-Data-START##
            Transcript exon combination :: AK068737.1, AB059621.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMD00008650, SAMD00020310
                                           [ECO:0000348]
            ##Evidence-Data-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-212               CI696974.1         2-213
            213-424             AU082508.1         153-364
            425-948             CB683361.1         235-758
            949-1073            CB673465.1         463-587
            1074-1533           CB673466.1         296-755             c
            1534-2030           CI105739.1         53-549
FEATURES             Location/Qualifiers
     source          1..2030
                     /organism="Oryza sativa Japonica Group"
                     /mol_type="mRNA"
                     /db_xref="taxon:39947"
                     /chromosome="1"
                     /map="1"
     gene            1..2030
                     /gene="LOC4327108"
                     /gene_synonym="OSKgamma"
                     /note="shaggy-related protein kinase alpha"
                     /db_xref="GeneID:4327108"
     exon            1..209
                     /gene="LOC4327108"
                     /gene_synonym="OSKgamma"
                     /inference="alignment:Splign:2.1.0"
     exon            210..395
                     /gene="LOC4327108"
                     /gene_synonym="OSKgamma"
                     /inference="alignment:Splign:2.1.0"
     misc_feature    279..281
                     /gene="LOC4327108"
                     /gene_synonym="OSKgamma"
                     /note="upstream in-frame stop codon"
     CDS             285..1511
                     /gene="LOC4327108"
                     /gene_synonym="OSKgamma"
                     /note="Os01g0252100; P0434D08.32-1; putative protein
                     kinase; shaggy-related protein kinase gamma"
                     /codon_start=1
                     /product="shaggy-related protein kinase alpha"
                     /protein_id="NP_001395975.1"
                     /db_xref="GeneID:4327108"
                     /translation="

MGSVGVAPSGLKNSSSTSMGAEKLPDQMHDLKIRDDKEVEATIINGKGTETGHIIVTTTGGRNGQPKQTVSYMAERIVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKNRELQTMRLLDHPNVVALKHCFFSTTEKDELYLNLVLEYVPETVHRVVKHYNKMNQRMPLIYVKLYMYQICRALAYIHNSIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGATEYTTAIDIWSAGCVLAELMLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEFKFPQIKAHPWHKVFHKRLPPEAVDLVSRLLQYSPNLRCTAVEALVHPFFDELRDPNARLPNGRFLPPLFNFKPHELKGIPSDIMAKLIPEHVKKQCSYAGV"

     misc_feature    483..1361
                     /gene="LOC4327108"
                     /gene_synonym="OSKgamma"
                     /note="The catalytic domain of the Serine/Threonine
                     Kinase, Glycogen Synthase Kinase 3; Region: STKc_GSK3;
                     cd14137"
                     /db_xref="CDD:271039"
     misc_feature    order(516..530,540..542,579..581,585..587,618..620,
                     660..662,723..734,741..743,747..752,873..875,879..881,
                     885..890,894..896,930..932,939..941,972..974,978..989,
                     993..995,1107..1109)
                     /gene="LOC4327108"
                     /gene_synonym="OSKgamma"
                     /note="active site"
                     /db_xref="CDD:271039"
     misc_feature    order(516..527,540..542,579..581,585..587,660..662,
                     723..734,741..743,879..881,885..890,894..896,930..932)
                     /gene="LOC4327108"
                     /gene_synonym="OSKgamma"
                     /note="ATP binding site [chemical binding]; other site"
                     /db_xref="CDD:271039"
     misc_feature    order(528..533,966..992,1014..1019,1110..1124,1128..1133,
                     1143..1145,1203..1214)
                     /gene="LOC4327108"
                     /gene_synonym="OSKgamma"
                     /note="dimer interface [polypeptide binding]; other site"
                     /db_xref="CDD:271039"
     misc_feature    order(618..620,747..749,873..875,879..881,939..941,
                     972..974,978..989,993..995,1107..1109)
                     /gene="LOC4327108"
                     /gene_synonym="OSKgamma"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]; other site"
                     /db_xref="CDD:271039"
     misc_feature    order(927..959,963..995)
                     /gene="LOC4327108"
                     /gene_synonym="OSKgamma"
                     /note="activation loop (A-loop); other site"
                     /db_xref="CDD:271039"
     misc_feature    order(1014..1016,1119..1124,1128..1133,1140..1145,
                     1203..1220)
                     /gene="LOC4327108"
                     /gene_synonym="OSKgamma"
                     /note="axin binding site [polypeptide binding]; other
                     site"
                     /db_xref="CDD:271039"
     exon            396..488
                     /gene="LOC4327108"
                     /gene_synonym="OSKgamma"
                     /inference="alignment:Splign:2.1.0"
     exon            489..548
                     /gene="LOC4327108"
                     /gene_synonym="OSKgamma"
                     /inference="alignment:Splign:2.1.0"
     exon            549..821
                     /gene="LOC4327108"
                     /gene_synonym="OSKgamma"
                     /inference="alignment:Splign:2.1.0"
     exon            822..896
                     /gene="LOC4327108"
                     /gene_synonym="OSKgamma"
                     /inference="alignment:Splign:2.1.0"
     exon            897..953
                     /gene="LOC4327108"
                     /gene_synonym="OSKgamma"
                     /inference="alignment:Splign:2.1.0"
     exon            954..1094
                     /gene="LOC4327108"
                     /gene_synonym="OSKgamma"
                     /inference="alignment:Splign:2.1.0"
     exon            1095..1145
                     /gene="LOC4327108"
                     /gene_synonym="OSKgamma"
                     /inference="alignment:Splign:2.1.0"
     exon            1146..1241
                     /gene="LOC4327108"
                     /gene_synonym="OSKgamma"
                     /inference="alignment:Splign:2.1.0"
     exon            1242..1325
                     /gene="LOC4327108"
                     /gene_synonym="OSKgamma"
                     /inference="alignment:Splign:2.1.0"
     exon            1326..1428
                     /gene="LOC4327108"
                     /gene_synonym="OSKgamma"
                     /inference="alignment:Splign:2.1.0"
     exon            1429..2030
                     /gene="LOC4327108"
                     /gene_synonym="OSKgamma"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      

aatcatttcggtttcggagagagagagagaggatttttttttccttcggcttatgtagtattgcgctgcgtcccgacaagcaaaagcaagaggaggaggccgcggctagcgagcgagcgagagagaggggagaagaagaggtgggacagccgggagatccatccctgtggagaggagggagggaggaaggaggcgttggaggaggagaggttgaccgatagatccattgcggagttgagtgttgatgcaaagctgattcgccatcgtttagctttttataagagatgggttcagtaggggttgcgccgtctgggttaaagaacagcagtagcaccagcatgggtgctgagaagttgcctgatcagatgcatgatctgaagataagggacgataaggaagttgaagcgactattattaacggcaagggaacagaaaccggccacataattgtcacaactactggtggcagaaatggtcagccgaaacagacagttagctacatggctgagcgtattgtagggcaaggttcatttgggattgtcttccaggcaaaatgtctggagacaggtgagacagttgctatcaagaaggttcttcaggataagcgctacaagaaccgtgagcttcagaccatgcgccttcttgaccacccaaatgttgtagctctgaagcactgtttcttctctacaactgagaaggatgaactgtatctaaacttggttcttgagtatgtgcctgaaactgttcatcgtgttgtgaagcattacaacaagatgaaccagcgtatgccacttatctatgtgaagctgtatatgtaccagatttgtagggcattagcttacatccataatagcatcggagtttgccacagagatatcaagccacagaatcttctggtaaacccacatacccatcaactcaagctatgtgactttgggagtgcaaaagttctggtcaagggagaaccgaacatatcgtacatttgctcccgatactatagggctccggagctcatatttggtgccaccgaatacactacagctattgacatctggtctgctggatgtgttcttgctgaacttatgttagggcagcctctgtttcctggtgaaagtggtgtagaccaacttgtggaaatcatcaaggtccttggaacacctacaagggaggaaattaaatgcatgaatccaaactataccgagttcaagtttccacagattaaagcacacccatggcacaaggtattccataaaaggttgcctccagaagctgttgatcttgtctctaggctgctccagtactcacccaacctaagatgcactgctgtggaagcacttgttcacccattctttgatgagcttcgagaccctaatgctcgccttccgaatggccgctttttgcctcctctcttcaacttcaagcctcatgaactgaaaggaatcccatcagatattatggcgaaattgatcccagaacatgtgaagaagcaatgctcctatgcaggagtatgagacagcttccgcacgacccccctggaaatttccatgacaagtgcccatttcctcccccctggacgacgatggatcgtcagcatatgcgtgcatgatggttggtgaagatgtgaagttacgttgttgttgtatgaccaccttgttgaccagtgtagttgagtagcagtatgttgcgatggcgaaactttgacatgtaaccggtgcacccacaccatccctcccctactaaccctcacccacctgagaattgagaattcccatagctgatgatctgtaatatgttctagagcagtttaagaatgtatttattatggtgtagttgatccatatgttgggatcctcctcgtcgattttcttggttctttgtgccctagactgctacctggtttttagactgttctgaaaatgctgctagtaccttctatctactgtacttgtttgctccttggtgctattgctccagcctcagctatgaggatgctctggcatatgaacgtatggacaagttcgtcgatgacc

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