LOCUS       NM_001406185            1540 bp    mRNA    linear   PLN 01-JAN-2023
DEFINITION  Oryza sativa Japonica Group fructose-bisphosphate aldolase 3,
            cytoplasmic-like (LOC4325027), mRNA.
ACCESSION   NM_001406185 XM_015758323
VERSION     NM_001406185.1
KEYWORDS    RefSeq.
SOURCE      Oryza sativa Japonica Group (Japanese rice)
  ORGANISM  Oryza sativa Japonica Group
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP
            clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa.
REFERENCE   1  (bases 1 to 1540)
  AUTHORS   Jantasuriyarat C, Gowda M, Haller K, Hatfield J, Lu G, Stahlberg E,
            Zhou B, Li H, Kim H, Yu Y, Dean RA, Wing RA, Soderlund C and Wang
            GL.
  TITLE     Large-scale identification of expressed sequence tags involved in
            rice and rice blast fungus interaction
  JOURNAL   Plant Physiol 138 (1), 105-115 (2005)
   PUBMED   15888683
REFERENCE   2  (bases 1 to 1540)
  AUTHORS   Kikuchi S, Satoh K, Nagata T, Kawagashira N, Doi K, Kishimoto N,
            Yazaki J, Ishikawa M, Yamada H, Ooka H, Hotta I, Kojima K, Namiki
            T, Ohneda E, Yahagi W, Suzuki K, Li CJ, Ohtsuki K, Shishiki T,
            Otomo Y, Murakami K, Iida Y, Sugano S, Fujimura T, Suzuki Y,
            Tsunoda Y, Kurosaki T, Kodama T, Masuda H, Kobayashi M, Xie Q, Lu
            M, Narikawa R, Sugiyama A, Mizuno K, Yokomizo S, Niikura J, Ikeda
            R, Ishibiki J, Kawamata M, Yoshimura A, Miura J, Kusumegi T, Oka M,
            Ryu R, Ueda M, Matsubara K, Kawai J, Carninci P, Adachi J, Aizawa
            K, Arakawa T, Fukuda S, Hara A, Hashizume W, Hayatsu N, Imotani K,
            Ishii Y, Itoh M, Kagawa I, Kondo S, Konno H, Miyazaki A, Osato N,
            Ota Y, Saito R, Sasaki D, Sato K, Shibata K, Shinagawa A, Shiraki
            T, Yoshino M, Hayashizaki Y and Yasunishi A.
  CONSRTM   Rice Full-Length cDNA Consortium; National Institute of
            Agrobiological Sciences Rice Full-Length cDNA Project Team;
            Foundation of Advancement of International Science Genome
            Sequencing & Analysis Group; RIKEN
  TITLE     Collection, mapping, and annotation of over 28,000 cDNA clones from
            japonica rice
  JOURNAL   Science 301 (5631), 376-379 (2003)
   PUBMED   12869764
  REMARK    Erratum:[Science. 2003 Sep;301(5641):1849]
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            CF277335.1, CB657388.1, C99285.1 and CI245249.1.
            
            On May 10, 2022 this sequence version replaced XM_015758323.2.
            
            ##Evidence-Data-START##
            Transcript exon combination :: EF122473.1, GQ848028.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMD00008650, SAMN03003175
                                           [ECO:0000348]
            ##Evidence-Data-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-408               CF277335.1         7-414
            409-901             CB657388.1         325-817
            902-990             C99285.1           251-339
            991-1540            CI245249.1         1-550
FEATURES             Location/Qualifiers
     source          1..1540
                     /organism="Oryza sativa Japonica Group"
                     /mol_type="mRNA"
                     /db_xref="taxon:39947"
                     /chromosome="1"
                     /map="1"
     gene            1..1540
                     /gene="LOC4325027"
                     /gene_synonym="AldC-1; aldolase; FBA3"
                     /note="fructose-bisphosphate aldolase 3, cytoplasmic-like"
                     /db_xref="GeneID:4325027"
     exon            1..157
                     /gene="LOC4325027"
                     /gene_synonym="AldC-1; aldolase; FBA3"
                     /inference="alignment:Splign:2.1.0"
     misc_feature    28..30
                     /gene="LOC4325027"
                     /gene_synonym="AldC-1; aldolase; FBA3"
                     /note="upstream in-frame stop codon"
     CDS             130..1206
                     /gene="LOC4325027"
                     /gene_synonym="AldC-1; aldolase; FBA3"
                     /EC_number="4.1.2.13"
                     /note="putative fructose-bisphosphate aldolase isoenzyme
                     C-1; B1417F08.1-2; LOC_Os01g67860; B1417F08.1-1; Aldolase
                     C-1"
                     /codon_start=1
                     /product="fructose-bisphosphate aldolase 3, cytoplasmic"
                     /protein_id="NP_001393114.1"
                     /db_xref="GeneID:4325027"
                     /translation="

MSAYCGKYKDELIKNAAYIGTPGKGILAADESTGTIGKRFASINVENVEENRRSLRELLFTTPGALQHLSGVILFEETLYQKTKDGKPFVDVLKEGGVLPGIKVDKGTVEVAGTNKETTTQGHDDLGKRCAKYYEAGARFAKWRAVLKIGPNEPSQLSIDLNAQGLARYAIICQENGLVPIVEPEILVDGSHDIERCAYVTEKVLAACYKALNEHHVLLEGSLLKPNMVTPGSESKKVSPQLIAEYTVRALQRTVPAAVPAIVFLSGGQSEEEATVNLNAMNKLSTKKPWALSFSFGRALQQSTLKAWGGKTENVVKAQKAFITRCKANSEATLGTYQGDAVLGEGASESLHVKDYKY"

     misc_feature    130..1203
                     /gene="LOC4325027"
                     /gene_synonym="AldC-1; aldolase; FBA3"
                     /note="fructose-bisphosphate aldolase; Region: PLN02455"
                     /db_xref="CDD:178074"
     misc_feature    order(217..225,232..234,436..438,553..555,559..561,
                     676..678,802..804,922..930,1012..1014,1018..1023)
                     /gene="LOC4325027"
                     /gene_synonym="AldC-1; aldolase; FBA3"
                     /note="active site"
                     /db_xref="CDD:188635"
     misc_feature    order(445..447,598..600,607..612,619..621,631..633,
                     640..642,724..726,736..738,745..747,766..771,775..777,
                     787..789,883..888,892..894)
                     /gene="LOC4325027"
                     /gene_synonym="AldC-1; aldolase; FBA3"
                     /note="intersubunit interface [polypeptide binding]; other
                     site"
                     /db_xref="CDD:188635"
     misc_feature    802..804
                     /gene="LOC4325027"
                     /gene_synonym="AldC-1; aldolase; FBA3"
                     /note="catalytic residue [active]"
                     /db_xref="CDD:188635"
     misc_feature    1201..1203
                     /gene="LOC4325027"
                     /gene_synonym="AldC-1; aldolase; FBA3"
                     /note="Necessary for preference for fructose
                     1,6-bisphosphate over fructose 1-phosphate.
                     /evidence=ECO:0000250|UniProtKB:P00883; propagated from
                     UniProtKB/Swiss-Prot (Q5N725.1); other site"
     exon            158..1517
                     /gene="LOC4325027"
                     /gene_synonym="AldC-1; aldolase; FBA3"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      

gcgtccaagactggactctcctctttataacccgtctcccttctcatctttttctccacagtcgcctcctcccctgccaaaccagtctcccccaaatctcctttgcgtcctctcgattcctcagcgaccatgtcggcctactgcggcaagtacaaggacgagctcatcaagaatgctgcctacattggcactcctggcaagggtatccttgctgcagatgagtccactggcaccattggcaagcgctttgccagcatcaatgtcgagaacgttgaggagaaccgccgctctctccgcgagctgctcttcaccacccctggtgccctccagcacctaagtggtgtgatcctcttcgaggagaccctgtaccagaagaccaaggacggcaagcccttcgtcgatgtcctcaaggagggtggtgtcctccctggcatcaaggttgacaagggtaccgttgaggttgccggcaccaacaaagagaccaccacccagggccacgatgatcttggcaagcgttgcgccaagtactacgaggccggtgcccgcttcgccaagtggcgtgctgtcctcaagattggccccaacgagccatcgcagctttccattgacctgaatgctcagggtcttgctcgctatgccatcatctgccaggagaacgggctggtgccgattgtcgagcctgagatccttgtcgatggctctcatgacattgagcgctgtgcctatgtcaccgagaaggtcctcgctgcctgctacaaggccctcaacgaacaccatgtcctcctggagggttccctcctgaagcccaacatggtcaccccaggatctgaatccaagaaggtttcccctcagctcatcgccgagtacaccgtccgcgccctccagaggactgtccctgctgccgtgcctgccattgtcttcctctctggtggacagagcgaggaggaggcgaccgtgaacctcaacgccatgaacaagctcagcaccaagaagccgtgggctctgtccttctccttcggccgtgctctccagcagagcacgctcaaggcctggggcggcaagacggagaacgtggtgaaggcgcagaaggccttcatcaccaggtgcaaggccaactctgaggctacccttggtacataccagggtgatgctgtgctcggcgagggtgcctctgagagccttcacgtcaaggactacaagtactgatctgcttctggtggtggctgaagatccgattggacatcctccgtatgcatatttagggttctgagtgtggtttggctatcaagcgtccaatcttacgggtatcaaaaacttttgtcgcaataatctgaacctgtgctttttaataattaatacctgtcatcggtagtagttttttggtattcctgtaatcaaatgctgcgtatggtaaattggagcagcggctttaattccatgctatctttttattgttattttctgctgtactcctatgttaattaaaccttttacctatatggcgttttgctgtgtctaaaaaaaaaaaaaaaaaaaaaaa

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